RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MRPL30Q8TCC3 161 aaKnown RBP2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 GPER1Q99527 375 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 SIGMAR1Q99720 223 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 TMEM56-RWDD3S4R434 201 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 M0R2Z0 102 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 GEMIN2O14893 280 aaKnown RBP2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 S100A7P31151 101 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 RPL5P46777 297 aaKnown RBP2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 OR10AC1Q8NH08 325 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 VSTM2AQ8TAG5 236 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 Q8TAT8 98 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 C9orf16Q9BUW7 83 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 C20orf27Q9GZN8 174 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 WDR61Q9GZS3 305 aaKnown RBP2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 CCDC90BQ9GZT6 254 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 R4GMQ9 66 aa2.4□□□□□ -2.03
HMGB1P23-201ENST00000518743 LOC107986453A0A1B0GWG9 222 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 A0A1W2PNN7 141 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 IRGMA1A4Y4 181 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 E7EUB6 86 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 CCL20P78556 96 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 SPINK13Q1W4C9 94 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 ASB16-AS1Q495Z4 193 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 FAM229BQ4G0N7 80 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 SPINK9Q5DT21 86 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 RPL22L1Q6P5R6 122 aaKnown RBP2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 TOMM20LQ6UXN7 152 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 FOXI2Q6ZQN5 318 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 C2orf91Q6ZV80 131 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 LHFPL1Q86WI0 220 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 STX12Q86Y82 276 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 GDPD1Q8N9F7 314 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 OR51A2Q8NGJ7 313 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 GNPDA2Q8TDQ7 276 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 ADAT3Q96EY9 351 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 NIPSNAP1Q9BPW8 284 aa2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 FAM32AQ9Y421 112 aaKnown RBP2.39□□□□□ -2.03
HMGB1P23-201ENST00000518743 TRAV12-2A0A075B6T6 113 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 A0A0J9YX75 114 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 GNRH2O43555 120 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 GNG7O60262 68 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 IGKV4-1P06312 121 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 SS18Q15532 418 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 RPL13AP3Q6NVV1 102 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 DPPA3Q6W0C5 159 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 COX6B2Q6YFQ2 88 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 TMEM263Q8WUH6 116 aaKnown RBP2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 AP3S1Q92572 193 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 S100A13Q99584 98 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 ZNF471Q9BX82 626 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 EFCAB1Q9HAE3 211 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 NDUFB11Q9NX14 153 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 FUT9Q9Y231 359 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 PKIGQ9Y2B9 76 aa2.38□□□□□ -2.03
HMGB1P23-201ENST00000518743 NFYAP23511 347 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST1H2BOP23527 126 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST1H2BBP33778 126 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST1H2BDP58876 126 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 VBP1P61758 197 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 SNRPGP62308 76 aaKnown RBP2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST1H2BCP62807 126 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 SELENOWP63302 87 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 PRCDQ00LT1 54 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 ZNF846Q147U1 533 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST2H2BEQ16778 126 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 MPV17LQ2QL34 196 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 LYZL1Q6UWQ5 148 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 Q6ZTI0 123 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 OR5C1Q8NGR4 320 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST1H2BHQ93079 126 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 TMEM203Q969S6 136 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST1H2BNQ99877 126 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 HIST1H2BMQ99879 126 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 TXNDC17Q9BRA2 123 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 TMEM147Q9BVK8 224 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 FAM107BQ9H098 131 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 CMTM6Q9NX76 183 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 CCDC167Q9P0B6 97 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 PRO0255Q9UI72 69 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 TIMM9Q9Y5J7 89 aa2.37□□□□□ -2.03
HMGB1P23-201ENST00000518743 TRAV9-1A0A075B6T8 112 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 TRGV1A0A0A0MS02 117 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 P0C880 135 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 ETV6P41212 452 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 RPL19P84098 196 aaKnown RBP2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 KLK9Q2XQG4 91 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 HACD4Q5VWC8 232 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 C9orf163Q8N9P6 203 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 SPACA4Q8TDM5 124 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 TOMM6Q96B49 74 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 C20orf166-AS1Q96NR2 134 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 CGREF1Q99674 301 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 YIPF3Q9GZM5 350 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 BATF3Q9NR55 127 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 ARMC1Q9NVT9 282 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms