RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 CCL18P55774 89 aa-0.61□□□□□ -2.51
RNU6-1028P-201ENST00000517164 ALX1Q15699 326 aa-0.61□□□□□ -2.51
RNU6-1028P-201ENST00000517164 ZNF609O15014 1411 aa-0.62□□□□□ -2.51
RNU6-1028P-201ENST00000517164 LOC105371267A0A1B0GV96 52 aa-0.62□□□□□ -2.51
RNU6-1028P-201ENST00000517164 PRDM2Q13029 1718 aa-0.62□□□□□ -2.51
RNU6-1028P-201ENST00000517164 TMEM191AQ9H0A3 160 aa-0.63□□□□□ -2.51
RNU6-1028P-201ENST00000517164 ZNF518AQ6AHZ1 1483 aa-0.63□□□□□ -2.51
RNU6-1028P-201ENST00000517164 IFT140Q96RY7 1462 aa-0.63□□□□□ -2.51
RNU6-1028P-201ENST00000517164 KDM3BQ7LBC6 1761 aa-0.63□□□□□ -2.51
RNU6-1028P-201ENST00000517164 PPRC1Q5VV67 1664 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1028P-201ENST00000517164 SIX6O95475 246 aa-0.64□□□□□ -2.51
RNU6-1028P-201ENST00000517164 PPP1R17O96001 155 aa-0.64□□□□□ -2.51
RNU6-1028P-201ENST00000517164 TCEAL4Q96EI5 215 aa-0.64□□□□□ -2.51
RNU6-1028P-201ENST00000517164 DPH3Q96FX2 82 aa-0.64□□□□□ -2.51
RNU6-1028P-201ENST00000517164 CSMD3Q7Z407 3707 aa-0.64□□□□□ -2.51
RNU6-1028P-201ENST00000517164 UNC13AQ9UPW8 1703 aa-0.64□□□□□ -2.51
RNU6-1028P-201ENST00000517164 HCG22E2RYF7 251 aa-0.65□□□□□ -2.51
RNU6-1028P-201ENST00000517164 BCE1O60756 84 aa-0.65□□□□□ -2.51
RNU6-1028P-201ENST00000517164 SMCO1Q147U7 214 aa-0.65□□□□□ -2.51
RNU6-1028P-201ENST00000517164 Q5VSD8 79 aa-0.65□□□□□ -2.51
RNU6-1028P-201ENST00000517164 Q8IZM0 81 aa-0.66□□□□□ -2.52
RNU6-1028P-201ENST00000517164 SPCS1Q9Y6A9 102 aa-0.66□□□□□ -2.52
RNU6-1028P-201ENST00000517164 R4GMQ9 66 aa-0.66□□□□□ -2.52
RNU6-1028P-201ENST00000517164 USF3Q68DE3 2245 aa-0.66□□□□□ -2.52
RNU6-1028P-201ENST00000517164 PXDNQ92626 1479 aa-0.67□□□□□ -2.52
RNU6-1028P-201ENST00000517164 CHD6Q8TD26 2715 aa-0.67□□□□□ -2.52
RNU6-1028P-201ENST00000517164 M0R135 149 aa-0.67□□□□□ -2.52
RNU6-1028P-201ENST00000517164 HIST1H1DP16402 221 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1028P-201ENST00000517164 SPTBN1Q01082 2364 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1028P-201ENST00000517164 PKD1L1Q8TDX9 2849 aa-0.67□□□□□ -2.52
RNU6-1028P-201ENST00000517164 LAMC1P11047 1609 aa-0.67□□□□□ -2.52
RNU6-1028P-201ENST00000517164 PI4KAP42356 2102 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 TRAV13-2A0A0B4J235 113 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 SPRR2DP22532 72 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 SPRR1AP35321 89 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 HAMPP81172 84 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 RBM3P98179 157 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 DOCK1Q14185 1865 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 CCDC167Q9P0B6 97 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 MRC1P22897 1456 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 HSPG2P98160 4391 aa-0.68□□□□□ -2.52
RNU6-1028P-201ENST00000517164 VWFP04275 2813 aa-0.69□□□□□ -2.52
RNU6-1028P-201ENST00000517164 MYOM3Q5VTT5 1437 aa-0.69□□□□□ -2.52
RNU6-1028P-201ENST00000517164 SPAARA0A1B0GVQ0 90 aa-0.69□□□□□ -2.52
RNU6-1028P-201ENST00000517164 C10orf128Q5T292 105 aa-0.69□□□□□ -2.52
RNU6-1028P-201ENST00000517164 AGPAT4-IT1Q9H0P7 198 aa-0.69□□□□□ -2.52
RNU6-1028P-201ENST00000517164 LRP6O75581 1613 aa-0.69□□□□□ -2.52
RNU6-1028P-201ENST00000517164 ZNF236Q9UL36 1845 aa-0.69□□□□□ -2.52
RNU6-1028P-201ENST00000517164 STAB1Q9NY15 2570 aa-0.69□□□□□ -2.52
RNU6-1028P-201ENST00000517164 PATJQ8NI35 1801 aa-0.7□□□□□ -2.52
RNU6-1028P-201ENST00000517164 CTXND1A0A1B0GTU2 59 aa-0.7□□□□□ -2.52
RNU6-1028P-201ENST00000517164 SPAG11BQ08648 103 aa-0.7□□□□□ -2.52
RNU6-1028P-201ENST00000517164 AQP10Q96PS8 301 aa-0.7□□□□□ -2.52
RNU6-1028P-201ENST00000517164 PDCD10Q9BUL8 212 aa-0.7□□□□□ -2.52
RNU6-1028P-201ENST00000517164 FLNAP21333 2647 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1028P-201ENST00000517164 ARAP2Q8WZ64 1704 aa-0.71□□□□□ -2.52
RNU6-1028P-201ENST00000517164 PRM1P04553 51 aa-0.71□□□□□ -2.52
RNU6-1028P-201ENST00000517164 SMIM4Q8WVI0 70 aa-0.71□□□□□ -2.52
RNU6-1028P-201ENST00000517164 PFDN5Q99471 154 aa-0.71□□□□□ -2.52
RNU6-1028P-201ENST00000517164 SPAG11AQ6PDA7 123 aa-0.72□□□□□ -2.52
RNU6-1028P-201ENST00000517164 GRIN2AQ12879 1464 aa-0.73□□□□□ -2.53
RNU6-1028P-201ENST00000517164 TTC9CQ8N5M4 171 aa-0.73□□□□□ -2.53
RNU6-1028P-201ENST00000517164 DOCK2Q92608 1830 aa-0.73□□□□□ -2.53
RNU6-1028P-201ENST00000517164 ERCC6L2Q5T890 1561 aa-0.74□□□□□ -2.53
RNU6-1028P-201ENST00000517164 S100A3P33764 101 aa-0.74□□□□□ -2.53
RNU6-1028P-201ENST00000517164 ARPC4P59998 168 aa-0.74□□□□□ -2.53
RNU6-1028P-201ENST00000517164 Q8N8P6 123 aa-0.74□□□□□ -2.53
RNU6-1028P-201ENST00000517164 LSM10Q969L4 123 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1028P-201ENST00000517164 TP53AIP1Q9HCN2 124 aa-0.74□□□□□ -2.53
RNU6-1028P-201ENST00000517164 LENEPQ9Y5L5 61 aa-0.74□□□□□ -2.53
RNU6-1028P-201ENST00000517164 MYO7BQ6PIF6 2116 aa-0.74□□□□□ -2.53
RNU6-1028P-201ENST00000517164 LRRC37A2A6NM11 1700 aa-0.75□□□□□ -2.53
RNU6-1028P-201ENST00000517164 PIGBOS1A0A0B4J2F0 54 aa-0.75□□□□□ -2.53
RNU6-1028P-201ENST00000517164 V9GYH0 126 aa-0.75□□□□□ -2.53
RNU6-1028P-201ENST00000517164 CSPG4Q6UVK1 2322 aa-0.75□□□□□ -2.53
RNU6-1028P-201ENST00000517164 C10orf71Q711Q0 1435 aa-0.76□□□□□ -2.53
RNU6-1028P-201ENST00000517164 MYCBP2O75592 4640 aa-0.76□□□□□ -2.53
RNU6-1028P-201ENST00000517164 PPIP5K1Q6PFW1 1433 aa-0.77□□□□□ -2.53
RNU6-1028P-201ENST00000517164 I3L2K1 104 aa-0.77□□□□□ -2.53
RNU6-1028P-201ENST00000517164 ZANQ9Y493 2812 aa-0.78□□□□□ -2.53
RNU6-1028P-201ENST00000517164 LRP2P98164 4655 aa-0.78□□□□□ -2.53
RNU6-1028P-201ENST00000517164 MAP1BP46821 2468 aaKnown RBP-0.78□□□□□ -2.53
RNU6-1028P-201ENST00000517164 CFTRP13569 1480 aa-0.78□□□□□ -2.53
RNU6-1028P-201ENST00000517164 C12orf73Q69YU5 71 aa-0.78□□□□□ -2.53
RNU6-1028P-201ENST00000517164 COPS9Q8WXC6 57 aa-0.78□□□□□ -2.53
RNU6-1028P-201ENST00000517164 AMELXQ99217 191 aa-0.78□□□□□ -2.53
RNU6-1028P-201ENST00000517164 GVINP1Q7Z2Y8 2422 aa-0.79□□□□□ -2.54
RNU6-1028P-201ENST00000517164 FXYD6-FXYD2A0A087WZ82 144 aa-0.79□□□□□ -2.54
RNU6-1028P-201ENST00000517164 DCDP81605 110 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1028P-201ENST00000517164 TMEM170BQ5T4T1 132 aa-0.79□□□□□ -2.54
RNU6-1028P-201ENST00000517164 RERGLQ9H628 205 aa-0.79□□□□□ -2.54
RNU6-1028P-201ENST00000517164 PAIP2BQ9ULR5 123 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1028P-201ENST00000517164 SERP1Q9Y6X1 66 aa-0.79□□□□□ -2.54
RNU6-1028P-201ENST00000517164 BICRAQ9NZM4 1560 aa-0.79□□□□□ -2.54
RNU6-1028P-201ENST00000517164 BCL9LQ86UU0 1499 aa-0.8□□□□□ -2.54
RNU6-1028P-201ENST00000517164 DCHS2Q6V1P9 2916 aa-0.8□□□□□ -2.54
RNU6-1028P-201ENST00000517164 Q6AWC8 147 aa-0.8□□□□□ -2.54
RNU6-1028P-201ENST00000517164 LINC00472Q9H8W2 130 aa-0.8□□□□□ -2.54
RNU6-1028P-201ENST00000517164 COX17Q14061 63 aa-0.81□□□□□ -2.54
RNU6-1028P-201ENST00000517164 Q6JHZ5 121 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms