RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 COTL1Q14019 142 aa9.29□□□□□ -0.92
SEC24D-208ENST00000506622 WDR73Q6P4I2 378 aa9.29□□□□□ -0.92
SEC24D-208ENST00000506622 Q6ZRU5 148 aa9.29□□□□□ -0.92
SEC24D-208ENST00000506622 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
SEC24D-208ENST00000506622 GFRA4Q9GZZ7 299 aa9.29□□□□□ -0.92
SEC24D-208ENST00000506622 DPH3P1Q9H4G8 78 aa9.29□□□□□ -0.92
SEC24D-208ENST00000506622 TNXBP22105 4242 aa9.28□□□□□ -0.92
SEC24D-208ENST00000506622 TRAV1-1A0A0B4J248 108 aa9.28□□□□□ -0.92
SEC24D-208ENST00000506622 NTF3P20783 257 aa9.28□□□□□ -0.92
SEC24D-208ENST00000506622 AMTP48728 403 aa9.28□□□□□ -0.92
SEC24D-208ENST00000506622 LYZL1Q6UWQ5 148 aa9.28□□□□□ -0.92
SEC24D-208ENST00000506622 BIN3Q9NQY0 253 aa9.28□□□□□ -0.92
SEC24D-208ENST00000506622 A0A087WYN8 130 aa9.27□□□□□ -0.93
SEC24D-208ENST00000506622 SLPIP03973 132 aa9.27□□□□□ -0.93
SEC24D-208ENST00000506622 CFAP161Q6P656 301 aa9.27□□□□□ -0.93
SEC24D-208ENST00000506622 MED9Q9NWA0 146 aa9.27□□□□□ -0.93
SEC24D-208ENST00000506622 PDE6DO43924 150 aa9.26□□□□□ -0.93
SEC24D-208ENST00000506622 CHTF8P0CG12 524 aa9.26□□□□□ -0.93
SEC24D-208ENST00000506622 MEF2BQ02080 365 aaPredicted RBP9.26□□□□□ -0.93
SEC24D-208ENST00000506622 EIF5AL1Q6IS14 154 aaKnown RBP9.26□□□□□ -0.93
SEC24D-208ENST00000506622 C9orf62Q8N4C0 152 aa9.26□□□□□ -0.93
SEC24D-208ENST00000506622 IGKV3OR2-268A0A0C4DH90 116 aa9.25□□□□□ -0.93
SEC24D-208ENST00000506622 TWIST1Q15672 202 aa9.25□□□□□ -0.93
SEC24D-208ENST00000506622 SPACA4Q8TDM5 124 aa9.25□□□□□ -0.93
SEC24D-208ENST00000506622 GAGE12HA6NDE8 117 aa9.24□□□□□ -0.93
SEC24D-208ENST00000506622 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
SEC24D-208ENST00000506622 C7orf33Q8WU49 177 aa9.24□□□□□ -0.93
SEC24D-208ENST00000506622 LRP2P98164 4655 aa9.23□□□□□ -0.93
SEC24D-208ENST00000506622 TRBV20OR9-2A0A075B6H5 130 aa9.23□□□□□ -0.93
SEC24D-208ENST00000506622 RPS10P46783 165 aaKnown RBP9.23□□□□□ -0.93
SEC24D-208ENST00000506622 AMMECR1LQ6DCA0 310 aa9.23□□□□□ -0.93
SEC24D-208ENST00000506622 C15orf56Q8N910 161 aa9.23□□□□□ -0.93
SEC24D-208ENST00000506622 NUDT10Q8NFP7 164 aa9.23□□□□□ -0.93
SEC24D-208ENST00000506622 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
SEC24D-208ENST00000506622 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
SEC24D-208ENST00000506622 CTRLP40313 264 aa9.22□□□□□ -0.93
SEC24D-208ENST00000506622 COX6A2Q02221 97 aa9.22□□□□□ -0.93
SEC24D-208ENST00000506622 GATD1Q8NB37 220 aa9.22□□□□□ -0.93
SEC24D-208ENST00000506622 PHOX2AO14813 284 aa9.21□□□□□ -0.94
SEC24D-208ENST00000506622 NDUFS6O75380 124 aaKnown RBP9.21□□□□□ -0.94
SEC24D-208ENST00000506622 HIGD2BQ4VC39 106 aa9.21□□□□□ -0.94
SEC24D-208ENST00000506622 RNASEKQ6P5S7 137 aaKnown RBP9.21□□□□□ -0.94
SEC24D-208ENST00000506622 SMIM15Q7Z3B0 74 aa9.21□□□□□ -0.94
SEC24D-208ENST00000506622 CNFNQ9BYD5 112 aa9.21□□□□□ -0.94
SEC24D-208ENST00000506622 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
SEC24D-208ENST00000506622 NCR2O95944 276 aa9.2□□□□□ -0.94
SEC24D-208ENST00000506622 BCL2P10415 239 aa9.2□□□□□ -0.94
SEC24D-208ENST00000506622 MAJINQ3KP22 176 aa9.2□□□□□ -0.94
SEC24D-208ENST00000506622 GTSF1Q8WW33 167 aa9.2□□□□□ -0.94
SEC24D-208ENST00000506622 CHCHD10Q8WYQ3 142 aaPredicted RBP9.2□□□□□ -0.94
SEC24D-208ENST00000506622 RPP21Q9H633 154 aaKnown RBP9.2□□□□□ -0.94
SEC24D-208ENST00000506622 IGKV2-24A0A0C4DH68 120 aa9.19□□□□□ -0.94
SEC24D-208ENST00000506622 H7C423 109 aa9.19□□□□□ -0.94
SEC24D-208ENST00000506622 APCSP02743 223 aa9.19□□□□□ -0.94
SEC24D-208ENST00000506622 TEX261Q6UWH6 196 aa9.19□□□□□ -0.94
SEC24D-208ENST00000506622 PRSS3P2Q8NHM4 247 aa9.19□□□□□ -0.94
SEC24D-208ENST00000506622 RNASE7Q9H1E1 156 aaKnown RBP9.19□□□□□ -0.94
SEC24D-208ENST00000506622 TAGLN2P37802 199 aaKnown RBP9.18□□□□□ -0.94
SEC24D-208ENST00000506622 Q6ZNX1 250 aa9.18□□□□□ -0.94
SEC24D-208ENST00000506622 RPL39LQ96EH5 51 aaKnown RBP9.18□□□□□ -0.94
SEC24D-208ENST00000506622 RNF213Q63HN8 5207 aa9.18□□□□□ -0.94
SEC24D-208ENST00000506622 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.17□□□□□ -0.94
SEC24D-208ENST00000506622 GVQW2A0A096LPI5 108 aaPredicted RBP9.17□□□□□ -0.94
SEC24D-208ENST00000506622 IGKV2-29A2NJV5 120 aaPredicted RBP9.17□□□□□ -0.94
SEC24D-208ENST00000506622 FGF6P10767 208 aa9.17□□□□□ -0.94
SEC24D-208ENST00000506622 STPG4Q8N801 248 aa9.17□□□□□ -0.94
SEC24D-208ENST00000506622 OCC1Q8TAD7 63 aa9.17□□□□□ -0.94
SEC24D-208ENST00000506622 SDHAF1A6NFY7 115 aa9.16□□□□□ -0.94
SEC24D-208ENST00000506622 LYPD6BQ8NI32 183 aa9.16□□□□□ -0.94
SEC24D-208ENST00000506622 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
SEC24D-208ENST00000506622 BTF3L4Q96K17 158 aa9.16□□□□□ -0.94
SEC24D-208ENST00000506622 K7EN84 100 aa9.15□□□□□ -0.94
SEC24D-208ENST00000506622 ZNF25P17030 456 aaPredicted RBP9.15□□□□□ -0.94
SEC24D-208ENST00000506622 PMCHP20382 165 aa9.15□□□□□ -0.94
SEC24D-208ENST00000506622 FOXA3P55318 350 aaPredicted RBP9.15□□□□□ -0.94
SEC24D-208ENST00000506622 FOXI1Q12951 378 aa9.15□□□□□ -0.94
SEC24D-208ENST00000506622 OR5A1Q8NGJ0 315 aa9.15□□□□□ -0.94
SEC24D-208ENST00000506622 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
SEC24D-208ENST00000506622 I3L3M4 83 aa9.14□□□□□ -0.95
SEC24D-208ENST00000506622 XCL1P47992 114 aa9.14□□□□□ -0.95
SEC24D-208ENST00000506622 PRR3P79522 188 aaKnown RBP9.14□□□□□ -0.95
SEC24D-208ENST00000506622 SLC51BQ86UW2 128 aa9.14□□□□□ -0.95
SEC24D-208ENST00000506622 LINC00474Q9P2X8 69 aa9.14□□□□□ -0.95
SEC24D-208ENST00000506622 GATCO43716 136 aaKnown RBP9.13□□□□□ -0.95
SEC24D-208ENST00000506622 LINC01600Q96MT4 127 aa9.13□□□□□ -0.95
SEC24D-208ENST00000506622 A0A096LNI7 61 aa9.12□□□□□ -0.95
SEC24D-208ENST00000506622 IGHV1-58A0A0C4DH39 117 aa9.12□□□□□ -0.95
SEC24D-208ENST00000506622 A8MWL6 223 aa9.12□□□□□ -0.95
SEC24D-208ENST00000506622 CCL25O15444 150 aa9.12□□□□□ -0.95
SEC24D-208ENST00000506622 TRBV6-5A0A0K0K1A5 114 aa9.11□□□□□ -0.95
SEC24D-208ENST00000506622 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
SEC24D-208ENST00000506622 FAM231BA6NCW3 169 aa9.11□□□□□ -0.95
SEC24D-208ENST00000506622 SS18Q15532 418 aa9.11□□□□□ -0.95
SEC24D-208ENST00000506622 BORCS7Q96B45 105 aa9.11□□□□□ -0.95
SEC24D-208ENST00000506622 MRAP2Q96G30 205 aa9.11□□□□□ -0.95
SEC24D-208ENST00000506622 ST20Q9HBF5 79 aa9.11□□□□□ -0.95
SEC24D-208ENST00000506622 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
SEC24D-208ENST00000506622 FAM231DQ6ZW35 169 aa9.1□□□□□ -0.95
SEC24D-208ENST00000506622 CARD19Q96LW7 228 aa9.1□□□□□ -0.95
SEC24D-208ENST00000506622 FAM210AQ96ND0 272 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms