RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SDHAF1A6NFY7 115 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 D6R8Y8 96 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 NUDT3O95989 172 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 TSHBP01222 138 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 MGPP08493 103 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 ESDP10768 282 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 WFDC10BQ8IUB3 73 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 ATP6V0E2Q8NHE4 81 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 URB1-AS1Q96HZ7 61 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 PRADC1Q9BSG0 188 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 GTSF1LQ9H1H1 148 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 TRBV6-8A0A0A6YYG3 113 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 IGHV3-38A0A0C4DH36 116 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 LINC01546A6NGU7 62 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 F5H697 171 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 TNFRSF6BO95407 300 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 HLA-DQA1P01909 254 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 DNAH10OSP0CZ25 163 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 SMIM17P0DL12 118 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 SRIP30626 198 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 SUMO2P61956 95 aaKnown RBP3.35□□□□□ -1.87
LMNB1-208ENST00000504788 RPL36AP83881 106 aaKnown RBP3.35□□□□□ -1.87
LMNB1-208ENST00000504788 IQCJQ1A5X6 159 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 LELP1Q5T871 98 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 KCNIP4Q6PIL6 250 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 LINC00469Q8N7U9 141 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 RPL36ALQ969Q0 106 aaKnown RBP3.35□□□□□ -1.87
LMNB1-208ENST00000504788 BORCS7Q96B45 105 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 ALKBH7Q9BT30 221 aaPredicted RBP3.35□□□□□ -1.87
LMNB1-208ENST00000504788 CHCHD7Q9BUK0 85 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 SMCO4Q9NRQ5 59 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
LMNB1-208ENST00000504788 H7C1H1 209 aa3.34□□□□□ -1.87
LMNB1-208ENST00000504788 PPBPP02775 128 aa3.34□□□□□ -1.87
LMNB1-208ENST00000504788 S100A8P05109 93 aa3.34□□□□□ -1.87
LMNB1-208ENST00000504788 LINC00310P59036 64 aa3.34□□□□□ -1.87
LMNB1-208ENST00000504788 KIAA1644Q3SXP7 199 aa3.34□□□□□ -1.87
LMNB1-208ENST00000504788 Q6ZRN7 208 aaPredicted RBP3.34□□□□□ -1.87
LMNB1-208ENST00000504788 SH2D6Q7Z4S9 175 aa3.34□□□□□ -1.87
LMNB1-208ENST00000504788 DAZ4Q86SG3 579 aaKnown RBP3.34□□□□□ -1.87
LMNB1-208ENST00000504788 C20orf78Q9BR46 151 aa3.34□□□□□ -1.87
LMNB1-208ENST00000504788 DAZ3Q9NR90 486 aaKnown RBP3.34□□□□□ -1.87
LMNB1-208ENST00000504788 A0A096LNJ9 63 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 MT-ND6P03923 174 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 S100PP25815 95 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 CKS2P33552 79 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 LINC01556Q5JQF7 62 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 NIT1Q86X76 327 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 ORMDL3Q8N138 153 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 DEFB104AQ8WTQ1 72 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 SMIM2Q9BVW6 85 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 Q9H8V8 135 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 LAMTOR2Q9Y2Q5 125 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 I3L3M4 83 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 CCL18P55774 89 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 COX19Q49B96 90 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 OR10J3Q5JRS4 329 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 SMIM15Q7Z3B0 74 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 C18orf32Q8TCD1 76 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 PRELID3AQ96N28 172 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 TNFRSF18Q9Y5U5 241 aa3.33□□□□□ -1.88
LMNB1-208ENST00000504788 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 NBDYA0A0U1RRE5 68 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 A0A1B0GUV1 79 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 SIVA1O15304 175 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 LY6G6CO95867 125 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 APCSP02743 223 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 TRGC2P03986 189 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 BTF3P20290 206 aaKnown RBP3.32□□□□□ -1.88
LMNB1-208ENST00000504788 RAB5AP20339 215 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 FABP9Q0Z7S8 132 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 MPV17L2Q567V2 206 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 KRTAP26-1Q6PEX3 210 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 C20orf203Q8NBC4 194 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 ST20Q9HBF5 79 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
LMNB1-208ENST00000504788 DYNC1H1Q14204 4646 aaKnown RBP3.32□□□□□ -1.88
LMNB1-208ENST00000504788 VCYO14598 125 aa3.31□□□□□ -1.88
LMNB1-208ENST00000504788 RTL8CO15255 209 aa3.31□□□□□ -1.88
LMNB1-208ENST00000504788 PPP1R17O96001 155 aa3.31□□□□□ -1.88
LMNB1-208ENST00000504788 IFI27P40305 119 aaPredicted RBP3.31□□□□□ -1.88
LMNB1-208ENST00000504788 MRPL52Q86TS9 123 aaKnown RBP3.31□□□□□ -1.88
LMNB1-208ENST00000504788 Q8N8P6 123 aa3.31□□□□□ -1.88
LMNB1-208ENST00000504788 Q8N976 141 aa3.31□□□□□ -1.88
LMNB1-208ENST00000504788 TRAPPC1Q9Y5R8 145 aa3.31□□□□□ -1.88
LMNB1-208ENST00000504788 TRBV25-1A0A075B6N4 114 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 IGHV1-24A0A0C4DH33 117 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 FAM229AH3BQW9 127 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 K7EP13 123 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 TCAPO15273 167 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 RBX1P62877 108 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 TMEM97Q5BJF2 176 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 ENHOQ6UWT2 76 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 MAPKAPK5-AS1Q8N8E1 139 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 UBE2D4Q9Y2X8 147 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 CSDC2Q9Y534 153 aaKnown RBP3.3□□□□□ -1.88
LMNB1-208ENST00000504788 LRP1BQ9NZR2 4599 aa3.3□□□□□ -1.88
LMNB1-208ENST00000504788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms