RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 IGKV3-7A0A075B6H7 116 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 HMGN4O00479 90 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 TPRXLQ17RH7 258 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 PCDH15Q96QU1 1955 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 GBF1Q92538 1859 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 CFAP74Q9C0B2 1584 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 CISD3P0C7P0 127 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 ZNF818PQ6ZRF7 136 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 NDUFA4L2Q9NRX3 87 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 DIP2CQ9Y2E4 1556 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 S100A3P33764 101 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 FAM167A-AS1Q96KT0 104 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 TMEM14BQ9NUH8 114 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 TARBP1Q13395 1621 aaKnown RBP2.99□□□□□ -1.93
NIPBL-204ENST00000504430 SETBP1Q9Y6X0 1596 aa2.99□□□□□ -1.93
NIPBL-204ENST00000504430 PXDNQ92626 1479 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 ARFGEF1Q9Y6D6 1849 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 TRBV6-8A0A0A6YYG3 113 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 CDC42SE2Q9NRR3 84 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 PRR34Q9NV39 138 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 LRCOL1A6NCL2 159 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 HIGD2AQ9BW72 106 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 CCL26Q9Y258 94 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 ARL2-SNX15V9GYD0 113 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 LINC01600Q96MT4 127 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 C22orf24Q9Y442 160 aa2.98□□□□□ -1.93
NIPBL-204ENST00000504430 TRBV25-1A0A075B6N4 114 aa2.97□□□□□ -1.93
NIPBL-204ENST00000504430 PDE6HQ13956 83 aa2.97□□□□□ -1.93
NIPBL-204ENST00000504430 C1orf137Q5JT78 98 aa2.97□□□□□ -1.93
NIPBL-204ENST00000504430 XAF1Q6GPH4 301 aa2.97□□□□□ -1.93
NIPBL-204ENST00000504430 LOC101927531A0A1B0GV80 90 aa2.97□□□□□ -1.93
NIPBL-204ENST00000504430 LYPD1Q8N2G4 141 aa2.97□□□□□ -1.93
NIPBL-204ENST00000504430 MYO3AQ8NEV4 1616 aa2.97□□□□□ -1.93
NIPBL-204ENST00000504430 PEAK1Q9H792 1746 aa2.97□□□□□ -1.93
NIPBL-204ENST00000504430 ALPK2Q86TB3 2170 aa2.96□□□□□ -1.94
NIPBL-204ENST00000504430 C6orf201Q7Z4U5 140 aa2.96□□□□□ -1.94
NIPBL-204ENST00000504430 KRTAP4-5Q9BYR2 181 aa2.96□□□□□ -1.94
NIPBL-204ENST00000504430 LAMA4Q16363 1823 aa2.96□□□□□ -1.94
NIPBL-204ENST00000504430 IGKV1-17P01599 117 aa2.96□□□□□ -1.94
NIPBL-204ENST00000504430 EFCAB5A4FU69 1503 aa2.96□□□□□ -1.94
NIPBL-204ENST00000504430 SHROOM3Q8TF72 1996 aa2.96□□□□□ -1.94
NIPBL-204ENST00000504430 PREX2Q70Z35 1606 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 C3orf79P0CE67 100 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 Q9BRP9 147 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 CLTCQ00610 1675 aaKnown RBP2.95□□□□□ -1.94
NIPBL-204ENST00000504430 ASXL1Q8IXJ9 1541 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 BTAF1O14981 1849 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 ZNF815PA8K554 130 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 IGLV3-1P01715 115 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 IGHV3-33P01772 117 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 C2orf82Q6UX34 121 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 PPP1R1CQ8WVI7 109 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 ABCA5Q8WWZ7 1642 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 MAP3K4Q9Y6R4 1608 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 SIPA1L3O60292 1781 aaPredicted RBP2.95□□□□□ -1.94
NIPBL-204ENST00000504430 TRBV10-1A0A0K0K1A3 114 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 TMEM14DPA8MWL7 114 aa2.95□□□□□ -1.94
NIPBL-204ENST00000504430 ANKRD17O75179 2603 aaKnown RBP2.95□□□□□ -1.94
NIPBL-204ENST00000504430 NUPR2A6NF83 97 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 PPP1R17O96001 155 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 IL9P15248 144 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 Q6ZTI0 123 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 RAPGEF6Q8TEU7 1601 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 TRBV6-7A0A0A0MS04 114 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 IGKV3D-7A0A0C4DH55 119 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 IGKV3OR2-268A0A0C4DH90 116 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 HMGN2P05204 90 aaKnown RBP2.94□□□□□ -1.94
NIPBL-204ENST00000504430 CROCC2H7BZ55 1655 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 H3BVH4 76 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 DEFB134Q4QY38 66 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 SNURFQ9Y675 71 aa2.94□□□□□ -1.94
NIPBL-204ENST00000504430 UNC13BO14795 1591 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 TRAV23DV6A0A075B6W5 121 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 PPYP01298 95 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 PATE1Q8WXA2 126 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 KLK9Q9UKQ9 250 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 INTS1Q8N201 2190 aaKnown RBP2.93□□□□□ -1.94
NIPBL-204ENST00000504430 FXYD6-FXYD2A0A087WZ82 144 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 FXYD1O00168 92 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 FXYD6Q9H0Q3 95 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 COL4A5P29400 1685 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 ITSN2Q9NZM3 1697 aa2.93□□□□□ -1.94
NIPBL-204ENST00000504430 PSCAO43653 123 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 ACYP1P07311 99 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 FAM103A1Q9BTL3 118 aaKnown RBP2.92□□□□□ -1.94
NIPBL-204ENST00000504430 WFDC10AQ9H1F0 79 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 NESP48681 1621 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 COX8AP10176 69 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 PSMG4Q5JS54 123 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 PRR15LQ9BU68 103 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 MYMXA0A1B0GTQ4 84 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 GCHFRP30047 84 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 KRTAP10-8P60410 259 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 DYNLRB1Q9NP97 96 aa2.92□□□□□ -1.94
NIPBL-204ENST00000504430 ABCC6O95255 1503 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms