RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 FAIMQ9NVQ4 179 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 PRO1854Q9UHT4 67 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 LENEPQ9Y5L5 61 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 GOLGA3Q08378 1498 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 ARHGAP35Q9NRY4 1499 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 LAMC3Q9Y6N6 1575 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 DLEC1Q9Y238 1755 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 TNRC6AQ8NDV7 1962 aaKnown RBP0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 EXPH5Q8NEV8 1989 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 PHRF1Q9P1Y6 1649 aaKnown RBP0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 NWD2Q9ULI1 1742 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 SHANK2Q9UPX8 1470 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 ANKRD36BQ8N2N9 1353 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 CHKB-CPT1BH3BT56 60 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 FXYD1O00168 92 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 NCR3O14931 201 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 COX6CP09669 75 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 FAUP35544 74 aaKnown RBP0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 SPAG11BQ08648 103 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 C6orf52Q5T4I8 152 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 TMEM170BQ5T4T1 132 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 SPAG11AQ6PDA7 123 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 C10orf99Q6UWK7 81 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 SERP2Q8N6R1 65 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 FAM213BQ8TBF2 198 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 LCN9Q8WX39 176 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 TRGV9Q99603 122 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 CCL19Q99731 98 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 PRO1933Q9H354 126 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 MANBALQ9NQG1 85 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 TMEM14BQ9NUH8 114 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 R4GMQ9 66 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 V9GYH0 126 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 KIAA0100Q14667 2235 aaKnown RBP0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 ZGRF1Q86YA3 2104 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 MARF1Q9Y4F3 1742 aaKnown RBP0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 ABCC3O15438 1527 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 PRDM15P57071 1507 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 MED12Q93074 2177 aa0.89□□□□□ -2.27
HMGB1P35-201ENST00000503360 DOCK1Q14185 1865 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 PLXNA1Q9UIW2 1896 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 MYH8P13535 1937 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 TRAV22A0A0B4J277 110 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 TRBV30A0A0K0K1B3 111 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 TRBV7-7A0A0K0K1E9 115 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 A0A1W2PPM0 123 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 TRAPPC2P0DI81 140 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 TRAPPC2BP0DI82 140 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 UBE2D3P61077 147 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 UBE2D2P62837 147 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 LINC00575Q6W349 94 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 NDUFA4L2Q9NRX3 87 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 NRXN2Q9P2S2 1712 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 LRRC37A3O60309 1634 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 CASP8AP2Q9UKL3 1982 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 DCAF1Q9Y4B6 1507 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 COL4A6Q14031 1691 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 RREB1Q92766 1687 aa0.88□□□□□ -2.27
HMGB1P35-201ENST00000503360 PARP14Q460N5 1801 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 CCDC18Q5T9S5 1454 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 PLEKHH2Q8IVE3 1493 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 MON2Q7Z3U7 1717 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 SPAG17Q6Q759 2223 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 A0A087WTM6 91 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 TMEM14DPA8MWL7 114 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 HMGN4O00479 90 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 APOC3P02656 99 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 SPTBP11277 2137 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 EFNA4P52798 201 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 Q5VV11 94 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 BAGE3Q86Y29 109 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 Q8N6K4 173 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 TET1Q8NFU7 2136 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 AMELXQ99217 191 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 WFDC6Q9BQY6 131 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 CDC42SE2Q9NRR3 84 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 CACFD1Q9UGQ2 172 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 RABAC1Q9UI14 185 aa0.87□□□□□ -2.27
HMGB1P35-201ENST00000503360 SIPA1L3O60292 1781 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 PPLO60437 1756 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 MAP3K1Q13233 1512 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 ARHGEF12Q9NZN5 1544 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 UQCRHLA0A096LP55 91 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 F8VRH5 84 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 K7EP34 96 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 CCL18P55774 89 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 PEA15Q15121 130 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 SPINK13Q1W4C9 94 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 PRRC2BQ5JSZ5 2229 aaKnown RBP0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 CEP162Q5TB80 1403 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 ARHGEF5Q12774 1597 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 DIP2CQ9Y2E4 1556 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 TANC1Q9C0D5 1861 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 MAGI2Q86UL8 1455 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 MLH3Q9UHC1 1453 aa0.86□□□□□ -2.27
HMGB1P35-201ENST00000503360 NCOA6Q14686 2063 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 PLIN4Q96Q06 1357 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 MYOM1P52179 1685 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 AFDNP55196 1824 aaKnown RBP0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms