RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 ZFAND6Q6FIF0 208 aa17.89■□□□□ 0.45
DDX41-202ENST00000503078 TRBV10-2A0A0K0K1G8 114 aa17.89■□□□□ 0.45
DDX41-202ENST00000503078 TINCRA0A1B0GVN0 87 aa17.89■□□□□ 0.45
DDX41-202ENST00000503078 USP9XQ93008 2570 aaPredicted RBP17.88■□□□□ 0.45
DDX41-202ENST00000503078 KNCNA6PVL3 124 aa17.88■□□□□ 0.45
DDX41-202ENST00000503078 VSIG2Q96IQ7 327 aa17.88■□□□□ 0.45
DDX41-202ENST00000503078 CLUHP3Q96NS8 147 aa17.88■□□□□ 0.45
DDX41-202ENST00000503078 CITED1Q99966 193 aa17.88■□□□□ 0.45
DDX41-202ENST00000503078 PRRC2AP48634 2157 aaKnown RBP17.88■□□□□ 0.45
DDX41-202ENST00000503078 TEX29Q8N6K0 151 aa17.87■□□□□ 0.45
DDX41-202ENST00000503078 SPANXA1Q9NS26 97 aa17.87■□□□□ 0.45
DDX41-202ENST00000503078 MIAQ16674 131 aa17.87■□□□□ 0.45
DDX41-202ENST00000503078 CHCHD7Q9BUK0 85 aa17.87■□□□□ 0.45
DDX41-202ENST00000503078 SORL1Q92673 2214 aa17.86■□□□□ 0.45
DDX41-202ENST00000503078 RPL13AP40429 203 aaKnown RBP17.86■□□□□ 0.45
DDX41-202ENST00000503078 UBE2D4Q9Y2X8 147 aa17.86■□□□□ 0.45
DDX41-202ENST00000503078 ICOSQ9Y6W8 199 aa17.86■□□□□ 0.45
DDX41-202ENST00000503078 RNF183Q96D59 192 aa17.85■□□□□ 0.45
DDX41-202ENST00000503078 Q9UF83 564 aa17.85■□□□□ 0.45
DDX41-202ENST00000503078 Q5PR19 223 aa17.84■□□□□ 0.45
DDX41-202ENST00000503078 DUX3Q96PT4 197 aa17.84■□□□□ 0.45
DDX41-202ENST00000503078 DEFB131AP59861 70 aa17.84■□□□□ 0.45
DDX41-202ENST00000503078 TEX49A0A1B0GTD5 131 aa17.83■□□□□ 0.45
DDX41-202ENST00000503078 A8MZ25 164 aa17.83■□□□□ 0.45
DDX41-202ENST00000503078 PIK3CD-AS1Q5SR53 167 aa17.83■□□□□ 0.45
DDX41-202ENST00000503078 Q6ZSN1 163 aa17.83■□□□□ 0.45
DDX41-202ENST00000503078 UBE2E2Q96LR5 201 aa17.83■□□□□ 0.45
DDX41-202ENST00000503078 CSPG4Q6UVK1 2322 aa17.83■□□□□ 0.44
DDX41-202ENST00000503078 A8MTW9 85 aa17.83■□□□□ 0.44
DDX41-202ENST00000503078 ANAPC13Q9BS18 74 aa17.83■□□□□ 0.44
DDX41-202ENST00000503078 PRM2P04554 102 aa17.82■□□□□ 0.44
DDX41-202ENST00000503078 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.82■□□□□ 0.44
DDX41-202ENST00000503078 IGKV2-29A2NJV5 120 aaPredicted RBP17.82■□□□□ 0.44
DDX41-202ENST00000503078 H3BMM0 161 aa17.82■□□□□ 0.44
DDX41-202ENST00000503078 COX6CP09669 75 aa17.81■□□□□ 0.44
DDX41-202ENST00000503078 ZNF415Q09FC8 603 aa17.81■□□□□ 0.44
DDX41-202ENST00000503078 SPG11Q96JI7 2443 aa17.81■□□□□ 0.44
DDX41-202ENST00000503078 NACAE9PAV3 2078 aa17.81■□□□□ 0.44
DDX41-202ENST00000503078 RBMY1BA6NDE4 496 aaKnown RBP17.81■□□□□ 0.44
DDX41-202ENST00000503078 RBMY1EA6NEQ0 496 aaKnown RBP17.81■□□□□ 0.44
DDX41-202ENST00000503078 SNCGO76070 127 aa17.81■□□□□ 0.44
DDX41-202ENST00000503078 RBMY1DP0C7P1 496 aaKnown RBP17.81■□□□□ 0.44
DDX41-202ENST00000503078 UBE2WQ96B02 151 aa17.81■□□□□ 0.44
DDX41-202ENST00000503078 YAE1D1Q9NRH1 226 aa17.81■□□□□ 0.44
DDX41-202ENST00000503078 NPC2P61916 151 aa17.8■□□□□ 0.44
DDX41-202ENST00000503078 C2orf82Q6UX34 121 aa17.8■□□□□ 0.44
DDX41-202ENST00000503078 LINC00467Q9BRT7 94 aa17.8■□□□□ 0.44
DDX41-202ENST00000503078 TRAV8-4A0A0B4J246 113 aa17.79■□□□□ 0.44
DDX41-202ENST00000503078 LINC01356Q8N9X3 169 aa17.79■□□□□ 0.44
DDX41-202ENST00000503078 USP24Q9UPU5 2620 aa17.79■□□□□ 0.44
DDX41-202ENST00000503078 H7C423 109 aa17.79■□□□□ 0.44
DDX41-202ENST00000503078 TMEM61Q8N0U2 210 aa17.79■□□□□ 0.44
DDX41-202ENST00000503078 MYO18BQ8IUG5 2567 aa17.78■□□□□ 0.44
DDX41-202ENST00000503078 TIMM17BO60830 172 aa17.78■□□□□ 0.44
DDX41-202ENST00000503078 DSCR9P59020 149 aa17.78■□□□□ 0.44
DDX41-202ENST00000503078 Q6ZSV7 163 aa17.78■□□□□ 0.44
DDX41-202ENST00000503078 VPREB3Q9UKI3 123 aa17.78■□□□□ 0.44
DDX41-202ENST00000503078 GAGE2BQ13066 116 aa17.77■□□□□ 0.44
DDX41-202ENST00000503078 GAGE2EQ4V326 116 aa17.77■□□□□ 0.44
DDX41-202ENST00000503078 ZNF702PQ9H963 129 aa17.77■□□□□ 0.44
DDX41-202ENST00000503078 GAGE2DQ9UEU5 116 aa17.77■□□□□ 0.44
DDX41-202ENST00000503078 DNAJC30Q96LL9 226 aa17.77■□□□□ 0.44
DDX41-202ENST00000503078 TRAV4A0A0B4J268 109 aa17.76■□□□□ 0.43
DDX41-202ENST00000503078 H3BT86 120 aa17.76■□□□□ 0.43
DDX41-202ENST00000503078 CRLF1O75462 422 aa17.76■□□□□ 0.43
DDX41-202ENST00000503078 IFITM1P13164 125 aa17.76■□□□□ 0.43
DDX41-202ENST00000503078 SLURP1P55000 103 aa17.76■□□□□ 0.43
DDX41-202ENST00000503078 IGHV3-38A0A0C4DH36 116 aa17.75■□□□□ 0.43
DDX41-202ENST00000503078 IGHV3-53P01767 116 aa17.75■□□□□ 0.43
DDX41-202ENST00000503078 CRYBG3Q68DQ2 2970 aa17.75■□□□□ 0.43
DDX41-202ENST00000503078 CDKN2A-AS1Q9UH64 79 aa17.75■□□□□ 0.43
DDX41-202ENST00000503078 UTP20O75691 2785 aaKnown RBP17.75■□□□□ 0.43
DDX41-202ENST00000503078 CLEC2BQ92478 149 aa17.74■□□□□ 0.43
DDX41-202ENST00000503078 MAP1AP78559 2803 aaPredicted RBP17.74■□□□□ 0.43
DDX41-202ENST00000503078 PRB1P04280 392 aa17.74■□□□□ 0.43
DDX41-202ENST00000503078 J3QLI3 93 aa17.73■□□□□ 0.43
DDX41-202ENST00000503078 LST1O00453 97 aa17.73■□□□□ 0.43
DDX41-202ENST00000503078 TIRAPP58753 221 aa17.73■□□□□ 0.43
DDX41-202ENST00000503078 DEFB136Q30KP8 78 aa17.73■□□□□ 0.43
DDX41-202ENST00000503078 C11orf72Q8NBR9 251 aa17.73■□□□□ 0.43
DDX41-202ENST00000503078 CELSR2Q9HCU4 2923 aa17.73■□□□□ 0.43
DDX41-202ENST00000503078 IGLV5-45A0A087WSX0 123 aa17.73■□□□□ 0.43
DDX41-202ENST00000503078 NDUFA1O15239 70 aa17.73■□□□□ 0.43
DDX41-202ENST00000503078 ZFYVE26Q68DK2 2539 aa17.72■□□□□ 0.43
DDX41-202ENST00000503078 NRGNQ92686 78 aa17.72■□□□□ 0.43
DDX41-202ENST00000503078 LINC01587Q99440 93 aa17.72■□□□□ 0.43
DDX41-202ENST00000503078 C18orf65Q6ZTR6 163 aa17.72■□□□□ 0.43
DDX41-202ENST00000503078 Q6Q795 121 aa17.71■□□□□ 0.43
DDX41-202ENST00000503078 DAND5Q8N907 189 aa17.71■□□□□ 0.43
DDX41-202ENST00000503078 TMEM101Q96IK0 257 aa17.71■□□□□ 0.43
DDX41-202ENST00000503078 NHLRC4P0CG21 123 aaPredicted RBP17.71■□□□□ 0.42
DDX41-202ENST00000503078 BEAN1Q3B7T3 259 aa17.71■□□□□ 0.42
DDX41-202ENST00000503078 BBC3Q96PG8 261 aaPredicted RBP17.7■□□□□ 0.42
DDX41-202ENST00000503078 NDUFV3P56181 108 aaKnown RBP17.69■□□□□ 0.42
DDX41-202ENST00000503078 Q6YL49 198 aa17.69■□□□□ 0.42
DDX41-202ENST00000503078 C15orf53Q8NAA6 179 aa17.69■□□□□ 0.42
DDX41-202ENST00000503078 RS1O15537 224 aa17.69■□□□□ 0.42
DDX41-202ENST00000503078 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.69■□□□□ 0.42
DDX41-202ENST00000503078 DGAT2L7PQ6IED9 249 aa17.68■□□□□ 0.42
DDX41-202ENST00000503078 MAP6D1Q9H9H5 199 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms