RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 A0A1W2PPR1 153 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 A6NDX4 124 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 CYSRT1A8MQ03 144 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 IGHG2P01859 326 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 PRSS2P07478 247 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 TSPEAR-AS2P59090 65 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 LYRM7Q5U5X0 104 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 C10orf126Q8N4M7 172 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 OR10J6PQ8NGY7 276 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 ZNRF2Q8NHG8 242 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 MRPL16Q9NX20 251 aaKnown RBP2.87□□□□□ -1.95
CLTC-209ENST00000498711 CYSLTR1Q9Y271 337 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 PTPN13Q12923 2485 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 SDHAF1A6NFY7 115 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 ZNF815PA8K554 130 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 GNRH2O43555 120 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 LY6HO94772 140 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 DUSP14O95147 198 aaKnown RBP2.87□□□□□ -1.95
CLTC-209ENST00000498711 TCL1BO95988 128 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 SAA4P35542 130 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 Q6Q795 121 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 UNQ9165/PRO28630Q6UXU0 137 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 C14orf178Q8N769 122 aaPredicted RBP2.87□□□□□ -1.95
CLTC-209ENST00000498711 PYGO1Q9Y3Y4 419 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 FBN2P35556 2912 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 HIVEP3Q5T1R4 2406 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 USP9XQ93008 2570 aaPredicted RBP2.86□□□□□ -1.95
CLTC-209ENST00000498711 IGHV3-16A0A0C4DH30 117 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 M0QY20 66 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 APOMO95445 188 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 IGHV3-33P01772 117 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 RPL13AP40429 203 aaKnown RBP2.86□□□□□ -1.95
CLTC-209ENST00000498711 HERVK_113P61574 105 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 GAGE5Q13069 117 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 GAGE6Q13070 117 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 ECSCRQ19T08 205 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 Q6ZUT4 128 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 DCANP1Q8TF63 244 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 LITAFQ99732 161 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 PPDPFQ9H3Y8 114 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 UFC1Q9Y3C8 167 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 IGHV3-66A0A0C4DH42 116 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 CKS1BP61024 79 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 SMAGPQ0VAQ4 97 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 KLHL30-AS1Q8NEE0 82 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 CCL19Q99731 98 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 ERG28Q9UKR5 140 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 IGHV3OR16-8A0A075B7F1 116 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 TRBV30A0A0K0K1B3 111 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 TMEM262E9PQX1 116 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 TRBV12-3P01733 135 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 ZNF688P0C7X2 276 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 MRPL23Q16540 153 aaKnown RBP2.86□□□□□ -1.95
CLTC-209ENST00000498711 FAM19A3Q7Z5A8 133 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 SPANXDQ9BXN6 97 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 SPANXCQ9NY87 97 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 PRO1854Q9UHT4 67 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 TP53TG1Q9Y2A0 90 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 PHLDA3Q9Y5J5 127 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 SELENOKQ9Y6D0 94 aa2.86□□□□□ -1.95
CLTC-209ENST00000498711 MED13LQ71F56 2210 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 IGHV3-35A0A0C4DH35 117 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 J3QQQ9 107 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 MT-ATP8P03928 68 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 ZNF22P17026 224 aaPredicted RBP2.85□□□□□ -1.95
CLTC-209ENST00000498711 XGP55808 180 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 C20orf203Q8NBC4 194 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 POLQO75417 2590 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 A8MWV9 139 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 TIMM17BO60830 172 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 IGHV4-39P01824 125 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 PSMB2P49721 201 aa2.85□□□□□ -1.95
CLTC-209ENST00000498711 MRPS36P82909 103 aaKnown RBP2.85□□□□□ -1.95
CLTC-209ENST00000498711 ANKHD1Q8IWZ3 2542 aaKnown RBP2.85□□□□□ -1.95
CLTC-209ENST00000498711 UNC79Q9P2D8 2635 aa2.84□□□□□ -1.95
CLTC-209ENST00000498711 IGLV5-45A0A087WSX0 123 aa2.84□□□□□ -1.95
CLTC-209ENST00000498711 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.84□□□□□ -1.95
CLTC-209ENST00000498711 A0A0J9YXY3 114 aa2.84□□□□□ -1.95
CLTC-209ENST00000498711 TRPT1Q86TN4 253 aaKnown RBP2.84□□□□□ -1.95
CLTC-209ENST00000498711 PRIMA1Q86XR5 153 aa2.84□□□□□ -1.95
CLTC-209ENST00000498711 SPATA3Q8NHX4 192 aa2.84□□□□□ -1.95
CLTC-209ENST00000498711 RHPN1-AS1Q9BWJ2 59 aa2.84□□□□□ -1.95
CLTC-209ENST00000498711 PRRC2AP48634 2157 aaKnown RBP2.84□□□□□ -1.95
CLTC-209ENST00000498711 ZANQ9Y493 2812 aa2.84□□□□□ -1.95
CLTC-209ENST00000498711 IGLV4-3A0A075B6K6 122 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 IGHV3OR16-13A0A075B7E8 117 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 A0A096LNT2 108 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 IGHV3-74A0A0B4J1X5 117 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 K7EQG2 157 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 SPINK8P0C7L1 97 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 S100A4P26447 101 aaKnown RBP2.84□□□□□ -1.96
CLTC-209ENST00000498711 ID1P41134 155 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 RPL39P62891 51 aaKnown RBP2.84□□□□□ -1.96
CLTC-209ENST00000498711 SRSF9Q13242 221 aaKnown RBP eCLIP2.84□□□□□ -1.96
CLTC-209ENST00000498711 ANKRD29Q8N6D5 301 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 KIR2DL4Q99706 377 aa2.84□□□□□ -1.96
CLTC-209ENST00000498711 GEMIN7Q9H840 131 aaKnown RBP2.84□□□□□ -1.96
CLTC-209ENST00000498711 JPT2Q9H910 190 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms