RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 DAZ3Q9NR90 486 aaKnown RBP10.3□□□□□ -0.76
NUP50-219ENST00000497960 D6R8Y8 96 aa10.29□□□□□ -0.76
NUP50-219ENST00000497960 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
NUP50-219ENST00000497960 LAGE3Q14657 143 aa10.29□□□□□ -0.76
NUP50-219ENST00000497960 TGIF2-C20orf24A0A0A6YYL0 155 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 PPP1R17O96001 155 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 HLA-DQA1P01909 254 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
NUP50-219ENST00000497960 ELOBQ15370 118 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 TMEM97Q5BJF2 176 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 TMEM136Q6ZRR5 245 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 CBLN2Q8IUK8 224 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 ST20Q9HBF5 79 aa10.28□□□□□ -0.76
NUP50-219ENST00000497960 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.77
NUP50-219ENST00000497960 COX19Q49B96 90 aa10.27□□□□□ -0.77
NUP50-219ENST00000497960 ORMDL3Q8N138 153 aa10.27□□□□□ -0.77
NUP50-219ENST00000497960 TM2D2Q9BX73 214 aa10.27□□□□□ -0.77
NUP50-219ENST00000497960 SMCO4Q9NRQ5 59 aa10.27□□□□□ -0.77
NUP50-219ENST00000497960 RYR1P21817 5038 aa10.26□□□□□ -0.77
NUP50-219ENST00000497960 TRAV8-3A0A0A6YYJ7 113 aa10.26□□□□□ -0.77
NUP50-219ENST00000497960 PPBPP02775 128 aa10.26□□□□□ -0.77
NUP50-219ENST00000497960 FUSP35637 526 aaKnown RBP eCLIP10.26□□□□□ -0.77
NUP50-219ENST00000497960 COTL1Q14019 142 aa10.26□□□□□ -0.77
NUP50-219ENST00000497960 Q8N3U1 123 aa10.26□□□□□ -0.77
NUP50-219ENST00000497960 NRACQ8N912 160 aa10.26□□□□□ -0.77
NUP50-219ENST00000497960 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
NUP50-219ENST00000497960 TRBV25-1A0A075B6N4 114 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 TRBV6-8A0A0A6YYG3 113 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 MT-ND6P03923 174 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 NIT1Q86X76 327 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 MAPKAPK5-AS1Q8N8E1 139 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 DEFB104AQ8WTQ1 72 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 PRELID3AQ96N28 172 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 TMEM70Q9BUB7 260 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 GNB1LQ9BYB4 327 aa10.25□□□□□ -0.77
NUP50-219ENST00000497960 TRBV24-1A0A075B6N3 115 aa10.24□□□□□ -0.77
NUP50-219ENST00000497960 A0A087WX48 190 aa10.24□□□□□ -0.77
NUP50-219ENST00000497960 IGHV1-24A0A0C4DH33 117 aa10.24□□□□□ -0.77
NUP50-219ENST00000497960 TNFRSF6BO95407 300 aa10.24□□□□□ -0.77
NUP50-219ENST00000497960 NPYP01303 97 aa10.24□□□□□ -0.77
NUP50-219ENST00000497960 APCSP02743 223 aa10.24□□□□□ -0.77
NUP50-219ENST00000497960 PMCHP20382 165 aa10.24□□□□□ -0.77
NUP50-219ENST00000497960 SUMO2P61956 95 aaKnown RBP10.24□□□□□ -0.77
NUP50-219ENST00000497960 KRTAP17-1Q9BYP8 105 aa10.24□□□□□ -0.77
NUP50-219ENST00000497960 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
NUP50-219ENST00000497960 I3L3M4 83 aa10.23□□□□□ -0.77
NUP50-219ENST00000497960 AMTP48728 403 aa10.23□□□□□ -0.77
NUP50-219ENST00000497960 CHCHD5Q9BSY4 110 aa10.23□□□□□ -0.77
NUP50-219ENST00000497960 CHCHD7Q9BUK0 85 aa10.23□□□□□ -0.77
NUP50-219ENST00000497960 MRPL18Q9H0U6 180 aaKnown RBP10.23□□□□□ -0.77
NUP50-219ENST00000497960 TMEM262E9PQX1 116 aa10.22□□□□□ -0.77
NUP50-219ENST00000497960 PHOX2AO14813 284 aa10.22□□□□□ -0.77
NUP50-219ENST00000497960 ATP6V1G1O75348 118 aa10.22□□□□□ -0.77
NUP50-219ENST00000497960 NTM-AS1Q6ZSK4 140 aa10.22□□□□□ -0.77
NUP50-219ENST00000497960 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
NUP50-219ENST00000497960 RMI2Q96E14 147 aa10.22□□□□□ -0.77
NUP50-219ENST00000497960 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
NUP50-219ENST00000497960 LAMTOR2Q9Y2Q5 125 aa10.22□□□□□ -0.77
NUP50-219ENST00000497960 COX11Q9Y6N1 276 aa10.22□□□□□ -0.77
NUP50-219ENST00000497960 IGLV5-52A0A0A0MRZ9 124 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 GCSHP23434 173 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 FCER1GP30273 86 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 POLR2KP53803 58 aaKnown RBP10.21□□□□□ -0.77
NUP50-219ENST00000497960 IQCJQ1A5X6 159 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 KIAA1644Q3SXP7 199 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 YPEL4Q96NS1 127 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 KIR2DL4Q99706 377 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 TMEM243Q9BU79 118 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 SMIM2Q9BVW6 85 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 MAP1LC3AQ9H492 121 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 KLK12Q9UKR0 248 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 TRAPPC1Q9Y5R8 145 aa10.21□□□□□ -0.77
NUP50-219ENST00000497960 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
NUP50-219ENST00000497960 UBE2L6O14933 153 aa10.2□□□□□ -0.78
NUP50-219ENST00000497960 PKIAP61925 76 aa10.2□□□□□ -0.78
NUP50-219ENST00000497960 FABP9Q0Z7S8 132 aa10.2□□□□□ -0.78
NUP50-219ENST00000497960 Q8N814 137 aa10.2□□□□□ -0.78
NUP50-219ENST00000497960 VCYO14598 125 aa10.19□□□□□ -0.78
NUP50-219ENST00000497960 SCO1O75880 301 aa10.19□□□□□ -0.78
NUP50-219ENST00000497960 TSHBP01222 138 aa10.19□□□□□ -0.78
NUP50-219ENST00000497960 KRTAP10-1P60331 282 aa10.19□□□□□ -0.78
NUP50-219ENST00000497960 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
NUP50-219ENST00000497960 GAGE6Q13070 117 aa10.19□□□□□ -0.78
NUP50-219ENST00000497960 Q8N1X5 172 aa10.19□□□□□ -0.78
NUP50-219ENST00000497960 UBE2WQ96B02 151 aa10.19□□□□□ -0.78
NUP50-219ENST00000497960 HSPG2P98160 4391 aa10.19□□□□□ -0.78
NUP50-219ENST00000497960 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
NUP50-219ENST00000497960 S100A1P23297 94 aa10.18□□□□□ -0.78
NUP50-219ENST00000497960 KRTAP4-5Q9BYR2 181 aa10.18□□□□□ -0.78
NUP50-219ENST00000497960 LOC389332A0A1B0GUA5 103 aa10.17□□□□□ -0.78
NUP50-219ENST00000497960 Q0VG73 95 aa10.17□□□□□ -0.78
NUP50-219ENST00000497960 MPV17L2Q567V2 206 aa10.17□□□□□ -0.78
NUP50-219ENST00000497960 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
NUP50-219ENST00000497960 PCLOQ9Y6V0 5065 aa10.17□□□□□ -0.78
NUP50-219ENST00000497960 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.16□□□□□ -0.78
NUP50-219ENST00000497960 IGKV2-29A2NJV5 120 aaPredicted RBP10.16□□□□□ -0.78
NUP50-219ENST00000497960 TCAPO15273 167 aa10.16□□□□□ -0.78
NUP50-219ENST00000497960 LECT2O14960 151 aa10.15□□□□□ -0.78
NUP50-219ENST00000497960 CRPP02741 224 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms