RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 C18orf15Q96N68 181 aa14.04□□□□□ -0.16
ACTN4-208ENST00000497637 PAM16Q9Y3D7 125 aa14.04□□□□□ -0.16
ACTN4-208ENST00000497637 TNFRSF18Q9Y5U5 241 aa14.04□□□□□ -0.16
ACTN4-208ENST00000497637 X6R8D5 127 aa14.04□□□□□ -0.16
ACTN4-208ENST00000497637 H0Y8G0 127 aa14.03□□□□□ -0.16
ACTN4-208ENST00000497637 C2orf66Q6UXQ4 117 aa14.03□□□□□ -0.16
ACTN4-208ENST00000497637 ATOH7Q8N100 152 aa14.03□□□□□ -0.16
ACTN4-208ENST00000497637 KMT2AQ03164 3969 aa14.02□□□□□ -0.16
ACTN4-208ENST00000497637 P0DMU3 169 aa14.02□□□□□ -0.17
ACTN4-208ENST00000497637 FAM231AP0DMU4 169 aa14.02□□□□□ -0.17
ACTN4-208ENST00000497637 FAM231CP0DMU5 169 aa14.02□□□□□ -0.17
ACTN4-208ENST00000497637 SPATA45Q537H7 98 aa14.02□□□□□ -0.17
ACTN4-208ENST00000497637 NEXN-AS1Q8NBZ9 246 aa14.02□□□□□ -0.17
ACTN4-208ENST00000497637 ZNF479Q96JC4 524 aa14.02□□□□□ -0.17
ACTN4-208ENST00000497637 SCGB3A1Q96QR1 104 aa14.02□□□□□ -0.17
ACTN4-208ENST00000497637 TSHBP01222 138 aa14.01□□□□□ -0.17
ACTN4-208ENST00000497637 CYSLTR1Q9Y271 337 aa14.01□□□□□ -0.17
ACTN4-208ENST00000497637 GAGE12BA1L429 117 aa14□□□□□ -0.17
ACTN4-208ENST00000497637 LINC00587B1AMM8 73 aa14□□□□□ -0.17
ACTN4-208ENST00000497637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14□□□□□ -0.17
ACTN4-208ENST00000497637 GAGE7O76087 117 aa14□□□□□ -0.17
ACTN4-208ENST00000497637 PRSS1P07477 247 aa14□□□□□ -0.17
ACTN4-208ENST00000497637 GAGE12FP0CL80 117 aa14□□□□□ -0.17
ACTN4-208ENST00000497637 GAGE12GP0CL81 117 aa14□□□□□ -0.17
ACTN4-208ENST00000497637 GAGE12IP0CL82 117 aa14□□□□□ -0.17
ACTN4-208ENST00000497637 LINC00612Q8N6U2 182 aa14□□□□□ -0.17
ACTN4-208ENST00000497637 TRBV10-1A0A0K0K1A3 114 aa13.99□□□□□ -0.17
ACTN4-208ENST00000497637 DDTP30046 118 aa13.99□□□□□ -0.17
ACTN4-208ENST00000497637 ERASQ7Z444 233 aa13.99□□□□□ -0.17
ACTN4-208ENST00000497637 PMCHL2Q9BQD1 86 aa13.99□□□□□ -0.17
ACTN4-208ENST00000497637 DNAH10Q8IVF4 4471 aa13.98□□□□□ -0.17
ACTN4-208ENST00000497637 TRGV2A0A075B6R0 118 aa13.98□□□□□ -0.17
ACTN4-208ENST00000497637 ODF1Q14990 250 aa13.98□□□□□ -0.17
ACTN4-208ENST00000497637 NACAE9PAV3 2078 aa13.98□□□□□ -0.17
ACTN4-208ENST00000497637 TRAV12-1A0A0B4J245 112 aa13.97□□□□□ -0.17
ACTN4-208ENST00000497637 MAJINQ3KP22 176 aa13.97□□□□□ -0.17
ACTN4-208ENST00000497637 Q9UF83 564 aa13.97□□□□□ -0.17
ACTN4-208ENST00000497637 NUPR2A6NF83 97 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 IGIPA6NJ69 53 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 HSBP1L1C9JCN9 74 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 K7EQD1 137 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 Q6ZN92 141 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 TMEM141Q96I45 108 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 MIEN1Q9BRT3 115 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 RETNQ9HD89 108 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 DKK2Q9UBU2 259 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 TP53TG1Q9Y2A0 90 aa13.96□□□□□ -0.17
ACTN4-208ENST00000497637 A0A087WX48 190 aa13.95□□□□□ -0.18
ACTN4-208ENST00000497637 hDV102S1A0JD36 115 aa13.95□□□□□ -0.18
ACTN4-208ENST00000497637 DEFB135Q30KP9 77 aa13.95□□□□□ -0.18
ACTN4-208ENST00000497637 C20orf203Q8NBC4 194 aa13.95□□□□□ -0.18
ACTN4-208ENST00000497637 OR11H2Q8NH07 326 aa13.95□□□□□ -0.18
ACTN4-208ENST00000497637 RNF183Q96D59 192 aa13.95□□□□□ -0.18
ACTN4-208ENST00000497637 TIMM17AQ99595 171 aa13.95□□□□□ -0.18
ACTN4-208ENST00000497637 IGLC3P0DOY3 106 aa13.94□□□□□ -0.18
ACTN4-208ENST00000497637 EMP1P54849 157 aa13.94□□□□□ -0.18
ACTN4-208ENST00000497637 DEFB104AQ8WTQ1 72 aa13.94□□□□□ -0.18
ACTN4-208ENST00000497637 TRBV6-4A0A1B0GX49 114 aa13.93□□□□□ -0.18
ACTN4-208ENST00000497637 LYRM9A8MSI8 78 aa13.93□□□□□ -0.18
ACTN4-208ENST00000497637 RPL39P62891 51 aaKnown RBP13.93□□□□□ -0.18
ACTN4-208ENST00000497637 RPL36AP83881 106 aaKnown RBP13.93□□□□□ -0.18
ACTN4-208ENST00000497637 RPL36ALQ969Q0 106 aaKnown RBP13.93□□□□□ -0.18
ACTN4-208ENST00000497637 ABCA13Q86UQ4 5058 aa13.92□□□□□ -0.18
ACTN4-208ENST00000497637 TRBV7-3A0A075B6L6 115 aa13.92□□□□□ -0.18
ACTN4-208ENST00000497637 MIFP14174 115 aa13.92□□□□□ -0.18
ACTN4-208ENST00000497637 FHL2Q14192 279 aa13.92□□□□□ -0.18
ACTN4-208ENST00000497637 SLC25A29Q8N8R3 303 aa13.92□□□□□ -0.18
ACTN4-208ENST00000497637 ZNRF2Q8NHG8 242 aa13.92□□□□□ -0.18
ACTN4-208ENST00000497637 BAALCQ8WXS3 180 aa13.92□□□□□ -0.18
ACTN4-208ENST00000497637 UQCR10Q9UDW1 63 aa13.92□□□□□ -0.18
ACTN4-208ENST00000497637 TRGV4A0A0C4DH28 118 aa13.91□□□□□ -0.18
ACTN4-208ENST00000497637 DPM2O94777 84 aa13.91□□□□□ -0.18
ACTN4-208ENST00000497637 IGHV4-28A0A0C4DH34 117 aa13.9□□□□□ -0.18
ACTN4-208ENST00000497637 IGKCP01834 107 aa13.9□□□□□ -0.18
ACTN4-208ENST00000497637 UBE2D3P61077 147 aa13.9□□□□□ -0.18
ACTN4-208ENST00000497637 UBE2D2P62837 147 aa13.9□□□□□ -0.18
ACTN4-208ENST00000497637 COTL1Q14019 142 aa13.9□□□□□ -0.18
ACTN4-208ENST00000497637 CHCHD7Q9BUK0 85 aa13.9□□□□□ -0.18
ACTN4-208ENST00000497637 MRPL35Q9NZE8 188 aaKnown RBP13.9□□□□□ -0.18
ACTN4-208ENST00000497637 KLK5Q9Y337 293 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-208ENST00000497637 PRSS29PA6NIE9 313 aa13.89□□□□□ -0.19
ACTN4-208ENST00000497637 F8VRH5 84 aa13.89□□□□□ -0.19
ACTN4-208ENST00000497637 CEMP1Q6PRD7 247 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-208ENST00000497637 DAZ4Q86SG3 579 aaKnown RBP13.89□□□□□ -0.19
ACTN4-208ENST00000497637 Q8NAQ8 132 aa13.89□□□□□ -0.19
ACTN4-208ENST00000497637 PHLDA1Q8WV24 401 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-208ENST00000497637 DAZ3Q9NR90 486 aaKnown RBP13.89□□□□□ -0.19
ACTN4-208ENST00000497637 CHTOPQ9Y3Y2 248 aaKnown RBP13.89□□□□□ -0.19
ACTN4-208ENST00000497637 PYGO1Q9Y3Y4 419 aa13.89□□□□□ -0.19
ACTN4-208ENST00000497637 DEFB130BP0DP73 79 aa13.88□□□□□ -0.19
ACTN4-208ENST00000497637 DEFB130AP0DP74 79 aa13.88□□□□□ -0.19
ACTN4-208ENST00000497637 PMVKQ15126 192 aa13.88□□□□□ -0.19
ACTN4-208ENST00000497637 FAM222AQ5U5X8 452 aa13.88□□□□□ -0.19
ACTN4-208ENST00000497637 PRADC1Q9BSG0 188 aa13.88□□□□□ -0.19
ACTN4-208ENST00000497637 IGHV3-38A0A0C4DH36 116 aa13.87□□□□□ -0.19
ACTN4-208ENST00000497637 GAGE12JA6NER3 117 aa13.87□□□□□ -0.19
ACTN4-208ENST00000497637 NPSP0C0P6 89 aa13.87□□□□□ -0.19
ACTN4-208ENST00000497637 GAGE1Q13065 139 aa13.87□□□□□ -0.19
ACTN4-208ENST00000497637 GAGE4Q13068 117 aa13.87□□□□□ -0.19
ACTN4-208ENST00000497637 GAGE5Q13069 117 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms