RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 JMJD1CQ15652 2540 aa7.92□□□□□ -1.14
TRAPPC12-223ENST00000497597 TINCRA0A1B0GVN0 87 aa7.92□□□□□ -1.14
TRAPPC12-223ENST00000497597 ZNF883P0CG24 379 aa7.92□□□□□ -1.14
TRAPPC12-223ENST00000497597 SAA4P35542 130 aa7.92□□□□□ -1.14
TRAPPC12-223ENST00000497597 FN1P02751 2386 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-223ENST00000497597 IGHV4-4A0A075B6R2 117 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 RNF223E7ERA6 249 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 DNAJC30Q96LL9 226 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 AMELXQ99217 191 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 IGLV4-3A0A075B6K6 122 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 EDN2P20800 178 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 RNF152Q8N8N0 203 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 USP9XQ93008 2570 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 A0A087WVE0 104 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 LST1O00453 97 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 UQCRQO14949 82 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 TRACP01848 142 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 KIR2DL5BQ8NHK3 375 aa7.91□□□□□ -1.14
TRAPPC12-223ENST00000497597 C20orf203Q8NBC4 194 aa7.9□□□□□ -1.14
TRAPPC12-223ENST00000497597 Q9H8V8 135 aa7.9□□□□□ -1.14
TRAPPC12-223ENST00000497597 IGHV3OR16-12A0A075B7B8 117 aa7.9□□□□□ -1.14
TRAPPC12-223ENST00000497597 HRCT1Q6UXD1 115 aa7.9□□□□□ -1.14
TRAPPC12-223ENST00000497597 NCOR2Q9Y618 2525 aa7.9□□□□□ -1.15
TRAPPC12-223ENST00000497597 PRIMA1Q86XR5 153 aa7.9□□□□□ -1.15
TRAPPC12-223ENST00000497597 POM121L12Q8N7R1 296 aa7.9□□□□□ -1.15
TRAPPC12-223ENST00000497597 NRGNQ92686 78 aa7.9□□□□□ -1.15
TRAPPC12-223ENST00000497597 PIP4P1Q86T03 277 aa7.89□□□□□ -1.15
TRAPPC12-223ENST00000497597 CYSTM1Q9H1C7 97 aa7.89□□□□□ -1.15
TRAPPC12-223ENST00000497597 LINC00643Q86TS7 51 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 TMEM61Q8N0U2 210 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 SMCR5Q8TEV8 140 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 SPANXA1Q9NS26 97 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 PEMTQ9UBM1 199 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 CCL21O00585 134 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 MIAQ16674 131 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 TRBV7-1A0A0A6YYK4 115 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 KHDC1LQ5JSQ8 128 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 MINOS1Q5TGZ0 78 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 C14orf132Q9NPU4 83 aa7.88□□□□□ -1.15
TRAPPC12-223ENST00000497597 ZFP36P26651 326 aaKnown RBP7.87□□□□□ -1.15
TRAPPC12-223ENST00000497597 CDKN2A-AS1Q9UH64 79 aa7.87□□□□□ -1.15
TRAPPC12-223ENST00000497597 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
TRAPPC12-223ENST00000497597 IGHV1-58A0A0C4DH39 117 aa7.87□□□□□ -1.15
TRAPPC12-223ENST00000497597 M0QY20 66 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 ATP5G1P05496 136 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 TIRAPP58753 221 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 LINC00315P59091 139 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 PIK3CD-AS1Q5SR53 167 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 IGFL2Q6UWQ7 119 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 C10orf105Q8TEF2 133 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 MRPL53Q96EL3 112 aaKnown RBP7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 C11orf68Q9H3H3 251 aaKnown RBP7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 Q9UF83 564 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 TRBV27A0A0K0K1C4 114 aa7.86□□□□□ -1.15
TRAPPC12-223ENST00000497597 PRB1P04280 392 aa7.85□□□□□ -1.15
TRAPPC12-223ENST00000497597 COX7CP15954 63 aa7.85□□□□□ -1.15
TRAPPC12-223ENST00000497597 Q8N2B8 174 aa7.85□□□□□ -1.15
TRAPPC12-223ENST00000497597 LENEPQ9Y5L5 61 aa7.85□□□□□ -1.15
TRAPPC12-223ENST00000497597 C4orf26Q17RF5 130 aa7.85□□□□□ -1.15
TRAPPC12-223ENST00000497597 WFDC9Q8NEX5 89 aa7.85□□□□□ -1.15
TRAPPC12-223ENST00000497597 IGHV4OR15-8A0A075B7B6 117 aa7.84□□□□□ -1.15
TRAPPC12-223ENST00000497597 A0A087WW49 117 aa7.84□□□□□ -1.15
TRAPPC12-223ENST00000497597 TRBV7-7A0A0K0K1E9 115 aa7.84□□□□□ -1.15
TRAPPC12-223ENST00000497597 IGHV3-53P01767 116 aa7.84□□□□□ -1.15
TRAPPC12-223ENST00000497597 KIF25-AS1Q9Y6Z4 181 aa7.84□□□□□ -1.15
TRAPPC12-223ENST00000497597 FAM208BQ5VWN6 2430 aa7.84□□□□□ -1.15
TRAPPC12-223ENST00000497597 LINC00526Q96FQ7 95 aa7.84□□□□□ -1.15
TRAPPC12-223ENST00000497597 ITLN2Q8WWU7 325 aaPredicted RBP7.84□□□□□ -1.16
TRAPPC12-223ENST00000497597 VSIG2Q96IQ7 327 aa7.84□□□□□ -1.16
TRAPPC12-223ENST00000497597 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
TRAPPC12-223ENST00000497597 IGHV1-69P01742 117 aa7.83□□□□□ -1.16
TRAPPC12-223ENST00000497597 SLPIP03973 132 aa7.83□□□□□ -1.16
TRAPPC12-223ENST00000497597 POLQO75417 2590 aa7.83□□□□□ -1.16
TRAPPC12-223ENST00000497597 F5H768 121 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 ACYP1P07311 99 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 ACACBO00763 2458 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 ODF3BA8MYP8 253 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 ATOX1O00244 68 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 COX7A2LO14548 114 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 CRPP02741 224 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 EBI3Q14213 229 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 CACNA1AO00555 2505 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 FAM240AA0A1B0GVK7 77 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 LINC00158P58513 81 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 LINC00308Q8TCZ7 52 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 MINOS1-NBL1R4GNA1 71 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 CHD8Q9HCK8 2581 aa7.82□□□□□ -1.16
TRAPPC12-223ENST00000497597 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 INAFM2P0DMQ5 153 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 PFN2P35080 140 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 SNRPD3P62318 126 aaKnown RBP7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 BLCAPP62952 87 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 C19orf54Q5BKX5 351 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 C1orf43Q9BWL3 253 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 CENPEQ02224 2701 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 LITAFQ99732 161 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 LINC00467Q9BRT7 94 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 HIVEP3Q5T1R4 2406 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 CCDC168Q8NDH2 2452 aa7.81□□□□□ -1.16
TRAPPC12-223ENST00000497597 VPS13CQ709C8 3753 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms