RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 NRXN2Q9P2S2 1712 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 UNC13BO14795 1591 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 ANKRD17O75179 2603 aaKnown RBP0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 AHCTF1Q8WYP5 2266 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 SPINK4O60575 86 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 HMGN1P05114 100 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 SPAG11BQ08648 103 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 WHAMMP3Q1A5X7 153 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 Q5VV11 94 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 SPAG11AQ6PDA7 123 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 MYOZ3Q8TDC0 251 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 SPANXDQ9BXN6 97 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 LINC00470Q9BZP3 86 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 AGPAT4-IT1Q9H0P7 198 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 NAA60Q9H7X0 242 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 UQCR10Q9UDW1 63 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 LINC00312Q9Y6C7 94 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 V9GYH0 126 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 GRIN2AQ12879 1464 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 ZNF518AQ6AHZ1 1483 aa0.14□□□□□ -2.39
HMGB1P30-201ENST00000492455 SPTBN2O15020 2390 aa0.13□□□□□ -2.39
HMGB1P30-201ENST00000492455 TRAV13-2A0A0B4J235 113 aa0.13□□□□□ -2.39
HMGB1P30-201ENST00000492455 WFDC2Q14508 124 aa0.13□□□□□ -2.39
HMGB1P30-201ENST00000492455 FDCSPQ8NFU4 85 aa0.13□□□□□ -2.39
HMGB1P30-201ENST00000492455 ARL11Q969Q4 196 aa0.13□□□□□ -2.39
HMGB1P30-201ENST00000492455 IFT140Q96RY7 1462 aa0.13□□□□□ -2.39
HMGB1P30-201ENST00000492455 BICRAQ9NZM4 1560 aa0.13□□□□□ -2.39
HMGB1P30-201ENST00000492455 ZMYM4Q5VZL5 1548 aa0.13□□□□□ -2.39
HMGB1P30-201ENST00000492455 G3V318 75 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 SYS1-DBNDD2H3BUS1 97 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 K7EP13 123 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 M0R135 149 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 UQCR11O14957 56 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 GNG7O60262 68 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 SIX6O95475 246 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 APOC2P02655 101 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 UBA52P62987 128 aaKnown RBP0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 RBM3P98179 157 aaKnown RBP0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 Q56UQ5 140 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 BAGE2Q86Y30 109 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 C8orf59Q8N0T1 100 aaPredicted RBP0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 SNRNP25Q9BV90 132 aaKnown RBP0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 FAM107BQ9H098 131 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 FXYD6Q9H0Q3 95 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 LENEPQ9Y5L5 61 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 DSTQ03001 7570 aaKnown RBP0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 CELSR2Q9HCU4 2923 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 MYOM3Q5VTT5 1437 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 HIVEP3Q5T1R4 2406 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 ABCA2Q9BZC7 2435 aa0.12□□□□□ -2.39
HMGB1P30-201ENST00000492455 UBR5O95071 2799 aaPredicted RBP0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 SHANK2Q9UPX8 1470 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 KTN1Q86UP2 1357 aaKnown RBP0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 CHD9Q3L8U1 2897 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 TRBV6-1A0A0K0K1D8 114 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 FAM24AA6NFZ4 105 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 HCG22E2RYF7 251 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 F6UZH7 168 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 F8VRH5 84 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 SSSCA1O60232 199 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 COX8AP10176 69 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 Q6JHZ5 121 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 LSM10Q969L4 123 aaKnown RBP0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 MGST2Q99735 147 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 VAMP8Q9BV40 100 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 TP53AIP1Q9HCN2 124 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 DYNLRB1Q9NP97 96 aa0.11□□□□□ -2.39
HMGB1P30-201ENST00000492455 GOLGA3Q08378 1498 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 FLNCQ14315 2725 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 SNAPC5O75971 98 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 MGPP08493 103 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 AKAIN1P0CW23 69 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 TRAPPC2P0DI81 140 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 TRAPPC2BP0DI82 140 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 MEIG1Q5JSS6 88 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 Q5VSD8 79 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 SVBPQ8N300 66 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 Q8N8P6 123 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 USMG5Q96IX5 58 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 SERP1Q9Y6X1 66 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 FAM208BQ5VWN6 2430 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 CASKIN1Q8WXD9 1431 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 PARP14Q460N5 1801 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 ERCC6L2Q5T890 1561 aa0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 POLA1P09884 1462 aaPredicted RBP0.1□□□□□ -2.39
HMGB1P30-201ENST00000492455 AKAP6Q13023 2319 aa0.09□□□□□ -2.39
HMGB1P30-201ENST00000492455 ARFGEF1Q9Y6D6 1849 aa0.09□□□□□ -2.39
HMGB1P30-201ENST00000492455 SPAARA0A1B0GVQ0 90 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 MIF4GDA9UHW6 222 aaKnown RBP0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 COX6B1P14854 86 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 CCL18P55774 89 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 KRTDAPP60985 99 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 UBE2L3P68036 154 aaKnown RBP0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 C9orf153Q5TBE3 101 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 Q6AWC8 147 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 MRPL54Q6P161 138 aaKnown RBP0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 C1orf54Q8WWF1 131 aa0.09□□□□□ -2.4
HMGB1P30-201ENST00000492455 PRO1933Q9H354 126 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms