RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 NDUFS6O75380 124 aaKnown RBP10.64□□□□□ -0.71
TOP3B-217ENST00000489581 PRR3P79522 188 aaKnown RBP10.64□□□□□ -0.71
TOP3B-217ENST00000489581 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
TOP3B-217ENST00000489581 RASL11AQ6T310 242 aa10.64□□□□□ -0.71
TOP3B-217ENST00000489581 FER1L6-AS1Q8NA97 138 aa10.64□□□□□ -0.71
TOP3B-217ENST00000489581 MBD3L1Q8WWY6 194 aa10.64□□□□□ -0.71
TOP3B-217ENST00000489581 IGLC6P0CF74 106 aa10.63□□□□□ -0.71
TOP3B-217ENST00000489581 LCE2AQ5TA79 106 aaPredicted RBP10.63□□□□□ -0.71
TOP3B-217ENST00000489581 STPG4Q8N801 248 aa10.63□□□□□ -0.71
TOP3B-217ENST00000489581 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
TOP3B-217ENST00000489581 RPL35P42766 123 aaKnown RBP10.62□□□□□ -0.71
TOP3B-217ENST00000489581 AMTP48728 403 aa10.62□□□□□ -0.71
TOP3B-217ENST00000489581 KCNRGQ8N5I3 272 aa10.62□□□□□ -0.71
TOP3B-217ENST00000489581 OR2D3Q8NGH3 330 aa10.62□□□□□ -0.71
TOP3B-217ENST00000489581 NIT2Q9NQR4 276 aa10.62□□□□□ -0.71
TOP3B-217ENST00000489581 A0A0J9YXV3 536 aa10.61□□□□□ -0.71
TOP3B-217ENST00000489581 CACNG7P62955 275 aa10.61□□□□□ -0.71
TOP3B-217ENST00000489581 COTL1Q14019 142 aa10.61□□□□□ -0.71
TOP3B-217ENST00000489581 KRTAP10-8P60410 259 aa10.6□□□□□ -0.71
TOP3B-217ENST00000489581 A0A096LNI7 61 aa10.59□□□□□ -0.71
TOP3B-217ENST00000489581 RPS20P60866 119 aaKnown RBP10.59□□□□□ -0.71
TOP3B-217ENST00000489581 CHCHD10Q8WYQ3 142 aaPredicted RBP10.59□□□□□ -0.71
TOP3B-217ENST00000489581 UMAD1C9J7I0 102 aa10.58□□□□□ -0.72
TOP3B-217ENST00000489581 H2AFB1P0C5Y9 115 aa10.58□□□□□ -0.72
TOP3B-217ENST00000489581 TRGC1P0CF51 173 aa10.58□□□□□ -0.72
TOP3B-217ENST00000489581 C19orf71A6NCJ1 209 aa10.57□□□□□ -0.72
TOP3B-217ENST00000489581 SMLR1H3BR10 107 aa10.57□□□□□ -0.72
TOP3B-217ENST00000489581 NTF3P20783 257 aa10.57□□□□□ -0.72
TOP3B-217ENST00000489581 CENPWQ5EE01 88 aa10.57□□□□□ -0.72
TOP3B-217ENST00000489581 REG3GQ6UW15 175 aa10.57□□□□□ -0.72
TOP3B-217ENST00000489581 SPINK6Q6UWN8 80 aa10.57□□□□□ -0.72
TOP3B-217ENST00000489581 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
TOP3B-217ENST00000489581 F2Z2F3 143 aa10.56□□□□□ -0.72
TOP3B-217ENST00000489581 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
TOP3B-217ENST00000489581 GVQW2A0A096LPI5 108 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-217ENST00000489581 XKRY2A2RUG3 117 aa10.55□□□□□ -0.72
TOP3B-217ENST00000489581 CCL20P78556 96 aa10.55□□□□□ -0.72
TOP3B-217ENST00000489581 RNASEKQ6P5S7 137 aaKnown RBP10.55□□□□□ -0.72
TOP3B-217ENST00000489581 C11orf52Q96A22 123 aa10.55□□□□□ -0.72
TOP3B-217ENST00000489581 GNG13Q9P2W3 67 aa10.55□□□□□ -0.72
TOP3B-217ENST00000489581 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
TOP3B-217ENST00000489581 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
TOP3B-217ENST00000489581 RAB19A4D1S5 217 aa10.54□□□□□ -0.72
TOP3B-217ENST00000489581 IFNA1P01562 189 aa10.54□□□□□ -0.72
TOP3B-217ENST00000489581 Q6ZNX1 250 aa10.54□□□□□ -0.72
TOP3B-217ENST00000489581 LINC00526Q96FQ7 95 aa10.54□□□□□ -0.72
TOP3B-217ENST00000489581 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
TOP3B-217ENST00000489581 GAS8-AS1O95177 125 aa10.53□□□□□ -0.72
TOP3B-217ENST00000489581 FOXI1Q12951 378 aa10.53□□□□□ -0.72
TOP3B-217ENST00000489581 SRSF9Q13242 221 aaKnown RBP eCLIP10.53□□□□□ -0.72
TOP3B-217ENST00000489581 GATD1Q8NB37 220 aa10.53□□□□□ -0.72
TOP3B-217ENST00000489581 MANBALQ9NQG1 85 aa10.53□□□□□ -0.72
TOP3B-217ENST00000489581 GNG4P50150 75 aa10.52□□□□□ -0.73
TOP3B-217ENST00000489581 ZNF345Q14585 488 aa10.52□□□□□ -0.73
TOP3B-217ENST00000489581 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
TOP3B-217ENST00000489581 FGF6P10767 208 aa10.51□□□□□ -0.73
TOP3B-217ENST00000489581 TWIST1Q15672 202 aa10.51□□□□□ -0.73
TOP3B-217ENST00000489581 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
TOP3B-217ENST00000489581 Q6ZRP5 223 aa10.51□□□□□ -0.73
TOP3B-217ENST00000489581 C9orf62Q8N4C0 152 aa10.51□□□□□ -0.73
TOP3B-217ENST00000489581 RPL39LQ96EH5 51 aaKnown RBP10.51□□□□□ -0.73
TOP3B-217ENST00000489581 XCL1P47992 114 aa10.5□□□□□ -0.73
TOP3B-217ENST00000489581 NCR2O95944 276 aa10.49□□□□□ -0.73
TOP3B-217ENST00000489581 APCSP02743 223 aa10.49□□□□□ -0.73
TOP3B-217ENST00000489581 CTRLP40313 264 aa10.49□□□□□ -0.73
TOP3B-217ENST00000489581 OR5A1Q8NGJ0 315 aa10.49□□□□□ -0.73
TOP3B-217ENST00000489581 SMIM12Q96EX1 92 aa10.49□□□□□ -0.73
TOP3B-217ENST00000489581 CARD19Q96LW7 228 aa10.49□□□□□ -0.73
TOP3B-217ENST00000489581 TRBV20OR9-2A0A075B6H5 130 aa10.48□□□□□ -0.73
TOP3B-217ENST00000489581 KANTRA0A1W2PQU2 76 aa10.48□□□□□ -0.73
TOP3B-217ENST00000489581 H7C423 109 aa10.48□□□□□ -0.73
TOP3B-217ENST00000489581 BCL2L11O43521 198 aa10.48□□□□□ -0.73
TOP3B-217ENST00000489581 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
TOP3B-217ENST00000489581 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
TOP3B-217ENST00000489581 PKIGQ9Y2B9 76 aa10.48□□□□□ -0.73
TOP3B-217ENST00000489581 LPAP08519 4548 aa10.48□□□□□ -0.73
TOP3B-217ENST00000489581 IGHV1-58A0A0C4DH39 117 aa10.47□□□□□ -0.73
TOP3B-217ENST00000489581 LINC00959A0A1B0GUT2 108 aa10.47□□□□□ -0.73
TOP3B-217ENST00000489581 CCL25O15444 150 aa10.47□□□□□ -0.73
TOP3B-217ENST00000489581 BIN3Q9NQY0 253 aa10.47□□□□□ -0.73
TOP3B-217ENST00000489581 MED9Q9NWA0 146 aa10.47□□□□□ -0.73
TOP3B-217ENST00000489581 SDHAF1A6NFY7 115 aa10.46□□□□□ -0.73
TOP3B-217ENST00000489581 FOXA3P55318 350 aaPredicted RBP10.46□□□□□ -0.73
TOP3B-217ENST00000489581 CNFNQ9BYD5 112 aa10.46□□□□□ -0.73
TOP3B-217ENST00000489581 TRAV1-1A0A0B4J248 108 aa10.45□□□□□ -0.74
TOP3B-217ENST00000489581 FAM231BA6NCW3 169 aa10.45□□□□□ -0.74
TOP3B-217ENST00000489581 HMSDA8MTL9 139 aa10.45□□□□□ -0.74
TOP3B-217ENST00000489581 ZNF25P17030 456 aaPredicted RBP10.45□□□□□ -0.74
TOP3B-217ENST00000489581 EIF5AP63241 154 aaKnown RBP10.45□□□□□ -0.74
TOP3B-217ENST00000489581 SYCNQ0VAF6 134 aa10.45□□□□□ -0.74
TOP3B-217ENST00000489581 GAGE2BQ13066 116 aa10.45□□□□□ -0.74
TOP3B-217ENST00000489581 TMEM101Q96IK0 257 aa10.45□□□□□ -0.74
TOP3B-217ENST00000489581 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
TOP3B-217ENST00000489581 ZNF561-AS1K7EIQ3 104 aa10.44□□□□□ -0.74
TOP3B-217ENST00000489581 PDE6DO43924 150 aa10.44□□□□□ -0.74
TOP3B-217ENST00000489581 PMCHP20382 165 aa10.44□□□□□ -0.74
TOP3B-217ENST00000489581 PTTG1IPP53801 180 aa10.44□□□□□ -0.74
TOP3B-217ENST00000489581 MEF2BQ02080 365 aaPredicted RBP10.44□□□□□ -0.74
TOP3B-217ENST00000489581 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
TOP3B-217ENST00000489581 A6NJY4 79 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms