RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
CTSA-207ENST00000484855 TCTAP57738 103 aa11.9□□□□□ -0.5
CTSA-207ENST00000484855 RPL36AP83881 106 aaKnown RBP11.9□□□□□ -0.5
CTSA-207ENST00000484855 RPL36ALQ969Q0 106 aaKnown RBP11.9□□□□□ -0.5
CTSA-207ENST00000484855 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
CTSA-207ENST00000484855 CTAG1AP78358 180 aa11.89□□□□□ -0.51
CTSA-207ENST00000484855 COTL1Q14019 142 aa11.89□□□□□ -0.51
CTSA-207ENST00000484855 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
CTSA-207ENST00000484855 COX8AP10176 69 aa11.89□□□□□ -0.51
CTSA-207ENST00000484855 TRGV4A0A0C4DH28 118 aa11.88□□□□□ -0.51
CTSA-207ENST00000484855 KRTAP10-11P60412 298 aa11.88□□□□□ -0.51
CTSA-207ENST00000484855 PMVKQ15126 192 aa11.88□□□□□ -0.51
CTSA-207ENST00000484855 ZC2HC1BQ5TFG8 222 aa11.88□□□□□ -0.51
CTSA-207ENST00000484855 OR11H2Q8NH07 326 aa11.88□□□□□ -0.51
CTSA-207ENST00000484855 MAST4O15021 2626 aa11.88□□□□□ -0.51
CTSA-207ENST00000484855 DEFB130BP0DP73 79 aa11.88□□□□□ -0.51
CTSA-207ENST00000484855 DEFB130AP0DP74 79 aa11.88□□□□□ -0.51
CTSA-207ENST00000484855 M0R143 59 aa11.87□□□□□ -0.51
CTSA-207ENST00000484855 EREGO14944 169 aa11.87□□□□□ -0.51
CTSA-207ENST00000484855 LINC00612Q8N6U2 182 aa11.87□□□□□ -0.51
CTSA-207ENST00000484855 CHCHD7Q9BUK0 85 aa11.87□□□□□ -0.51
CTSA-207ENST00000484855 TRBV6-4A0A1B0GX49 114 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 NMUP48645 174 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 EGFEM1PQ0D2K5 195 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 MRPL52Q86TS9 123 aaKnown RBP11.86□□□□□ -0.51
CTSA-207ENST00000484855 SNHG12Q9BXW3 62 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 GAGE1Q13065 139 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 GAGE4Q13068 117 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 GAGE5Q13069 117 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 CST9LQ9H4G1 147 aa11.86□□□□□ -0.51
CTSA-207ENST00000484855 UBE2D3P61077 147 aa11.85□□□□□ -0.51
CTSA-207ENST00000484855 UBE2D2P62837 147 aa11.85□□□□□ -0.51
CTSA-207ENST00000484855 FHL2Q14192 279 aa11.85□□□□□ -0.51
CTSA-207ENST00000484855 DAZ4Q86SG3 579 aaKnown RBP11.85□□□□□ -0.51
CTSA-207ENST00000484855 OPRPNQ99935 248 aaPredicted RBP11.85□□□□□ -0.51
CTSA-207ENST00000484855 DAZ3Q9NR90 486 aaKnown RBP11.85□□□□□ -0.51
CTSA-207ENST00000484855 ZMAT5Q9UDW3 170 aaKnown RBP11.85□□□□□ -0.51
CTSA-207ENST00000484855 MRPS16Q9Y3D3 137 aaKnown RBP11.85□□□□□ -0.51
CTSA-207ENST00000484855 NBEAL2Q6ZNJ1 2754 aa11.85□□□□□ -0.51
CTSA-207ENST00000484855 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
CTSA-207ENST00000484855 IGLV4-3A0A075B6K6 122 aa11.84□□□□□ -0.51
CTSA-207ENST00000484855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.84□□□□□ -0.51
CTSA-207ENST00000484855 IGHV4-28A0A0C4DH34 117 aa11.84□□□□□ -0.51
CTSA-207ENST00000484855 IGKV2-29A2NJV5 120 aaPredicted RBP11.84□□□□□ -0.51
CTSA-207ENST00000484855 LYRM9A8MSI8 78 aa11.84□□□□□ -0.51
CTSA-207ENST00000484855 FAM222AQ5U5X8 452 aa11.84□□□□□ -0.51
CTSA-207ENST00000484855 FGF6P10767 208 aa11.84□□□□□ -0.51
CTSA-207ENST00000484855 RNF183Q96D59 192 aa11.84□□□□□ -0.51
CTSA-207ENST00000484855 DNAH3Q8TD57 4116 aa11.83□□□□□ -0.52
CTSA-207ENST00000484855 IGLV4-69A0A075B6H9 119 aa11.83□□□□□ -0.52
CTSA-207ENST00000484855 IGKV2D-26A0A0A0MRZ7 120 aa11.83□□□□□ -0.52
CTSA-207ENST00000484855 LOC100131303A0A0U1RQF7 123 aa11.83□□□□□ -0.52
CTSA-207ENST00000484855 MIFP14174 115 aa11.83□□□□□ -0.52
CTSA-207ENST00000484855 PAPPA-AS1Q5QFB9 102 aa11.83□□□□□ -0.52
CTSA-207ENST00000484855 PRADC1Q9BSG0 188 aa11.83□□□□□ -0.52
CTSA-207ENST00000484855 DEFB4AO15263 64 aa11.82□□□□□ -0.52
CTSA-207ENST00000484855 BOD1L2Q8IYS8 172 aa11.82□□□□□ -0.52
CTSA-207ENST00000484855 SPANXA1Q9NS26 97 aa11.82□□□□□ -0.52
CTSA-207ENST00000484855 LBHQ53QV2 105 aaPredicted RBP11.82□□□□□ -0.52
CTSA-207ENST00000484855 PCP2Q8IVA1 136 aa11.82□□□□□ -0.52
CTSA-207ENST00000484855 Q8NAQ8 132 aa11.82□□□□□ -0.52
CTSA-207ENST00000484855 VCX2Q9H322 139 aa11.82□□□□□ -0.52
CTSA-207ENST00000484855 UBE2D4Q9Y2X8 147 aa11.82□□□□□ -0.52
CTSA-207ENST00000484855 PKD1L1Q8TDX9 2849 aa11.81□□□□□ -0.52
CTSA-207ENST00000484855 BATFQ16520 125 aa11.81□□□□□ -0.52
CTSA-207ENST00000484855 CEMP1Q6PRD7 247 aaPredicted RBP11.81□□□□□ -0.52
CTSA-207ENST00000484855 ANK2Q01484 3957 aa11.81□□□□□ -0.52
CTSA-207ENST00000484855 C11orf86A6NJI1 115 aa11.81□□□□□ -0.52
CTSA-207ENST00000484855 NPSP0C0P6 89 aa11.81□□□□□ -0.52
CTSA-207ENST00000484855 G3V4G9 280 aa11.8□□□□□ -0.52
CTSA-207ENST00000484855 DLEU1O43261 78 aa11.8□□□□□ -0.52
CTSA-207ENST00000484855 COL6A5A8TX70 2615 aa11.8□□□□□ -0.52
CTSA-207ENST00000484855 A8MZ25 164 aa11.79□□□□□ -0.52
CTSA-207ENST00000484855 C2orf91Q6ZV80 131 aa11.79□□□□□ -0.52
CTSA-207ENST00000484855 C2orf88Q9BSF0 95 aa11.79□□□□□ -0.52
CTSA-207ENST00000484855 CRYBA4P53673 196 aa11.79□□□□□ -0.52
CTSA-207ENST00000484855 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
CTSA-207ENST00000484855 FAM104AQ969W3 186 aa11.79□□□□□ -0.52
CTSA-207ENST00000484855 AMELXQ99217 191 aa11.79□□□□□ -0.52
CTSA-207ENST00000484855 HINT1P49773 126 aaPredicted RBP11.78□□□□□ -0.52
CTSA-207ENST00000484855 TMEM97Q5BJF2 176 aa11.78□□□□□ -0.52
CTSA-207ENST00000484855 TTTY13Q9BZ97 58 aa11.78□□□□□ -0.52
CTSA-207ENST00000484855 GTSF1LQ9H1H1 148 aa11.78□□□□□ -0.52
CTSA-207ENST00000484855 LINC00694P0DN24 101 aa11.77□□□□□ -0.53
CTSA-207ENST00000484855 DAD1P61803 113 aa11.77□□□□□ -0.53
CTSA-207ENST00000484855 RNASE13Q5GAN3 156 aaKnown RBP11.77□□□□□ -0.53
CTSA-207ENST00000484855 Q6ZUT4 128 aa11.77□□□□□ -0.53
CTSA-207ENST00000484855 CHAC1Q9BUX1 264 aa11.77□□□□□ -0.53
CTSA-207ENST00000484855 NFE4Q86UQ8 179 aa11.77□□□□□ -0.53
CTSA-207ENST00000484855 TIMM21Q9BVV7 248 aa11.77□□□□□ -0.53
CTSA-207ENST00000484855 CELA1Q9UNI1 258 aa11.77□□□□□ -0.53
CTSA-207ENST00000484855 TRAV8-6A0A0B4J262 113 aa11.76□□□□□ -0.53
CTSA-207ENST00000484855 E9PLD3 99 aa11.76□□□□□ -0.53
CTSA-207ENST00000484855 TMEM170BQ5T4T1 132 aa11.76□□□□□ -0.53
CTSA-207ENST00000484855 DGAT2L7PQ6IED9 249 aa11.76□□□□□ -0.53
CTSA-207ENST00000484855 PRO0255Q9UI72 69 aa11.76□□□□□ -0.53
CTSA-207ENST00000484855 SIVA1O15304 175 aa11.75□□□□□ -0.53
CTSA-207ENST00000484855 HERVK_113P61574 105 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms