RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 BTF3P20290 206 aaKnown RBP7.07□□□□□ -1.28
HDAC6-226ENST00000483656 KRTDAPP60985 99 aa7.07□□□□□ -1.28
HDAC6-226ENST00000483656 CDPF1Q6NVV7 123 aa7.07□□□□□ -1.28
HDAC6-226ENST00000483656 TOMM6Q96B49 74 aa7.07□□□□□ -1.28
HDAC6-226ENST00000483656 PRADC1Q9BSG0 188 aa7.07□□□□□ -1.28
HDAC6-226ENST00000483656 PRO0255Q9UI72 69 aa7.07□□□□□ -1.28
HDAC6-226ENST00000483656 HSPB8Q9UJY1 196 aa7.07□□□□□ -1.28
HDAC6-226ENST00000483656 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
HDAC6-226ENST00000483656 C2orf66Q6UXQ4 117 aa7.06□□□□□ -1.28
HDAC6-226ENST00000483656 NTM-AS1Q6ZSK4 140 aa7.06□□□□□ -1.28
HDAC6-226ENST00000483656 LINC00518Q8N0U6 118 aa7.06□□□□□ -1.28
HDAC6-226ENST00000483656 C20orf203Q8NBC4 194 aa7.06□□□□□ -1.28
HDAC6-226ENST00000483656 B9D2Q9BPU9 175 aa7.06□□□□□ -1.28
HDAC6-226ENST00000483656 CHCHD7Q9BUK0 85 aa7.06□□□□□ -1.28
HDAC6-226ENST00000483656 PRKDCP78527 4128 aaKnown RBP7.06□□□□□ -1.28
HDAC6-226ENST00000483656 COL7A1Q02388 2944 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 DYNC2H1Q8NCM8 4307 aaKnown RBP7.05□□□□□ -1.28
HDAC6-226ENST00000483656 F5H768 121 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 SYS1-DBNDD2H3BUS1 97 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 PAX4O43316 350 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 SMIM6P0DI80 62 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 GYPEP15421 78 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 HTN3P15516 51 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 NANOS2P60321 138 aaKnown RBP7.05□□□□□ -1.28
HDAC6-226ENST00000483656 Q6ZTC4 211 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 DAZ4Q86SG3 579 aaKnown RBP7.05□□□□□ -1.28
HDAC6-226ENST00000483656 IFI27L1Q96BM0 104 aa7.05□□□□□ -1.28
HDAC6-226ENST00000483656 DAZ3Q9NR90 486 aaKnown RBP7.05□□□□□ -1.28
HDAC6-226ENST00000483656 TRAV26-1A0A087WT03 109 aa7.04□□□□□ -1.28
HDAC6-226ENST00000483656 A0A0J9YY99 117 aa7.04□□□□□ -1.28
HDAC6-226ENST00000483656 IGIPA6NJ69 53 aa7.04□□□□□ -1.28
HDAC6-226ENST00000483656 COTL1Q14019 142 aa7.04□□□□□ -1.28
HDAC6-226ENST00000483656 SCGB3A1Q96QR1 104 aa7.04□□□□□ -1.28
HDAC6-226ENST00000483656 MAP1LC3CQ9BXW4 147 aa7.04□□□□□ -1.28
HDAC6-226ENST00000483656 CYSLTR1Q9Y271 337 aa7.04□□□□□ -1.28
HDAC6-226ENST00000483656 ATP5LO75964 103 aa7.03□□□□□ -1.28
HDAC6-226ENST00000483656 SCGB1D1O95968 90 aa7.03□□□□□ -1.28
HDAC6-226ENST00000483656 PET117Q6UWS5 81 aa7.03□□□□□ -1.28
HDAC6-226ENST00000483656 C11orf45Q8TAV5 145 aa7.03□□□□□ -1.28
HDAC6-226ENST00000483656 FAM104AQ969W3 186 aa7.03□□□□□ -1.28
HDAC6-226ENST00000483656 ZMAT4Q9H898 229 aa7.03□□□□□ -1.28
HDAC6-226ENST00000483656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-226ENST00000483656 IGKV2-29A2NJV5 120 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-226ENST00000483656 G0S2P27469 103 aa7.02□□□□□ -1.29
HDAC6-226ENST00000483656 DEFA6Q01524 100 aa7.02□□□□□ -1.29
HDAC6-226ENST00000483656 LINC01545Q5VT33 79 aa7.02□□□□□ -1.29
HDAC6-226ENST00000483656 ERASQ7Z444 233 aa7.02□□□□□ -1.29
HDAC6-226ENST00000483656 ATP6V0E2Q8NHE4 81 aa7.02□□□□□ -1.29
HDAC6-226ENST00000483656 C12orf57Q99622 126 aa7.02□□□□□ -1.29
HDAC6-226ENST00000483656 GTSF1LQ9H1H1 148 aa7.02□□□□□ -1.29
HDAC6-226ENST00000483656 LINC01549A6NIU2 74 aa7.01□□□□□ -1.29
HDAC6-226ENST00000483656 H0Y8G0 127 aa7.01□□□□□ -1.29
HDAC6-226ENST00000483656 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-226ENST00000483656 ZC2HC1BQ5TFG8 222 aa7.01□□□□□ -1.29
HDAC6-226ENST00000483656 BAALCQ8WXS3 180 aa7.01□□□□□ -1.29
HDAC6-226ENST00000483656 TIMM17AQ99595 171 aa7.01□□□□□ -1.29
HDAC6-226ENST00000483656 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-226ENST00000483656 PMCHL2Q9BQD1 86 aa7.01□□□□□ -1.29
HDAC6-226ENST00000483656 A0A096LPF7 62 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 PRSS1P07477 247 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 ODF1Q14990 250 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 LGALS9CQ6DKI2 356 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 CEMP1Q6PRD7 247 aaPredicted RBP7□□□□□ -1.29
HDAC6-226ENST00000483656 TEX43Q6ZNM6 134 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 TMEM141Q96I45 108 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 UBE2D4Q9Y2X8 147 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 PYGO1Q9Y3Y4 419 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 STAB2Q8WWQ8 2551 aa7□□□□□ -1.29
HDAC6-226ENST00000483656 IGLV4-3A0A075B6K6 122 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 DEFB131BA0A096LNP1 70 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 TRBV6-8A0A0A6YYG3 113 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 TRAV12-1A0A0B4J245 112 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 H3BNG1 76 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 MRPL23Q16540 153 aaKnown RBP6.99□□□□□ -1.29
HDAC6-226ENST00000483656 Q6ZN92 141 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 ATOH7Q8N100 152 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 TMEM243Q9BU79 118 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 TIMM21Q9BVV7 248 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 ICOSQ9Y6W8 199 aa6.99□□□□□ -1.29
HDAC6-226ENST00000483656 TRBV25-1A0A075B6N4 114 aa6.98□□□□□ -1.29
HDAC6-226ENST00000483656 A0A087WX48 190 aa6.98□□□□□ -1.29
HDAC6-226ENST00000483656 PRSS29PA6NIE9 313 aa6.98□□□□□ -1.29
HDAC6-226ENST00000483656 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-226ENST00000483656 TMEM97Q5BJF2 176 aa6.98□□□□□ -1.29
HDAC6-226ENST00000483656 MRPL52Q86TS9 123 aaKnown RBP6.98□□□□□ -1.29
HDAC6-226ENST00000483656 SPANXA1Q9NS26 97 aa6.98□□□□□ -1.29
HDAC6-226ENST00000483656 DNAH7Q8WXX0 4024 aa6.98□□□□□ -1.29
HDAC6-226ENST00000483656 TRAV10A0A0B4J240 114 aa6.97□□□□□ -1.29
HDAC6-226ENST00000483656 C20orf202A1L168 122 aa6.97□□□□□ -1.29
HDAC6-226ENST00000483656 FGF6P10767 208 aa6.97□□□□□ -1.29
HDAC6-226ENST00000483656 MAJINQ3KP22 176 aa6.97□□□□□ -1.29
HDAC6-226ENST00000483656 Q6ZUT4 128 aa6.97□□□□□ -1.29
HDAC6-226ENST00000483656 AMELXQ99217 191 aa6.97□□□□□ -1.29
HDAC6-226ENST00000483656 CST9LQ9H4G1 147 aa6.97□□□□□ -1.29
HDAC6-226ENST00000483656 MRPL35Q9NZE8 188 aaKnown RBP6.97□□□□□ -1.29
HDAC6-226ENST00000483656 H7C423 109 aa6.96□□□□□ -1.3
HDAC6-226ENST00000483656 NPSP0C0P6 89 aa6.96□□□□□ -1.3
HDAC6-226ENST00000483656 MRPS36P82909 103 aaKnown RBP6.96□□□□□ -1.3
HDAC6-226ENST00000483656 GAGE6Q13070 117 aa6.96□□□□□ -1.3
HDAC6-226ENST00000483656 PMVKQ15126 192 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms