RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 Q8N814 137 aa9.24□□□□□ -0.93
VARS-225ENST00000482996 UBE2WQ96B02 151 aa9.24□□□□□ -0.93
VARS-225ENST00000482996 GFRA4Q9GZZ7 299 aa9.24□□□□□ -0.93
VARS-225ENST00000482996 IGKV2D-24A0A075B6R9 120 aa9.23□□□□□ -0.93
VARS-225ENST00000482996 FAM231BA6NCW3 169 aa9.23□□□□□ -0.93
VARS-225ENST00000482996 Q0VG73 95 aa9.23□□□□□ -0.93
VARS-225ENST00000482996 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
VARS-225ENST00000482996 SMIM15Q7Z3B0 74 aa9.23□□□□□ -0.93
VARS-225ENST00000482996 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
VARS-225ENST00000482996 TRBV25-1A0A075B6N4 114 aa9.22□□□□□ -0.93
VARS-225ENST00000482996 HIGD1CA8MV81 97 aa9.22□□□□□ -0.93
VARS-225ENST00000482996 CRPP02741 224 aa9.22□□□□□ -0.93
VARS-225ENST00000482996 KRTAP10-1P60331 282 aa9.22□□□□□ -0.93
VARS-225ENST00000482996 SMIM27A0A1W2PRY6 76 aa9.21□□□□□ -0.94
VARS-225ENST00000482996 S100A8P05109 93 aa9.21□□□□□ -0.94
VARS-225ENST00000482996 MPV17L2Q567V2 206 aa9.21□□□□□ -0.94
VARS-225ENST00000482996 NTM-AS1Q6ZSK4 140 aa9.21□□□□□ -0.94
VARS-225ENST00000482996 Q8N1X5 172 aa9.21□□□□□ -0.94
VARS-225ENST00000482996 NIT2Q9NQR4 276 aa9.21□□□□□ -0.94
VARS-225ENST00000482996 ABCA13Q86UQ4 5058 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 IGHV1-24A0A0C4DH33 117 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 LECT2O14960 151 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
VARS-225ENST00000482996 RIGQ13278 110 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 IQCJQ1A5X6 159 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 COX19Q49B96 90 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 GTSF1Q8WW33 167 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 BAALCQ8WXS3 180 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 PGLYRP4Q96LB8 373 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 C1orf43Q9BWL3 253 aa9.2□□□□□ -0.94
VARS-225ENST00000482996 TRBV24-1A0A075B6N3 115 aa9.19□□□□□ -0.94
VARS-225ENST00000482996 GAGE6Q13070 117 aa9.19□□□□□ -0.94
VARS-225ENST00000482996 WFDC2Q14508 124 aa9.19□□□□□ -0.94
VARS-225ENST00000482996 MRPL54Q6P161 138 aaKnown RBP9.19□□□□□ -0.94
VARS-225ENST00000482996 ATP5L2Q7Z4Y8 100 aa9.19□□□□□ -0.94
VARS-225ENST00000482996 NUP35Q8NFH5 326 aa9.19□□□□□ -0.94
VARS-225ENST00000482996 FRZBQ92765 325 aa9.19□□□□□ -0.94
VARS-225ENST00000482996 TGIF2-C20orf24A0A0A6YYL0 155 aa9.18□□□□□ -0.94
VARS-225ENST00000482996 A0A1B0GUT8 65 aa9.18□□□□□ -0.94
VARS-225ENST00000482996 RBX1P62877 108 aa9.18□□□□□ -0.94
VARS-225ENST00000482996 Q8N976 141 aa9.18□□□□□ -0.94
VARS-225ENST00000482996 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
VARS-225ENST00000482996 KRTAP4-5Q9BYR2 181 aa9.18□□□□□ -0.94
VARS-225ENST00000482996 A0A1B0GW15 77 aa9.17□□□□□ -0.94
VARS-225ENST00000482996 RPS10P46783 165 aaKnown RBP9.17□□□□□ -0.94
VARS-225ENST00000482996 XGP55808 180 aa9.17□□□□□ -0.94
VARS-225ENST00000482996 COTL1Q14019 142 aa9.17□□□□□ -0.94
VARS-225ENST00000482996 MIAQ16674 131 aa9.17□□□□□ -0.94
VARS-225ENST00000482996 ENHOQ6UWT2 76 aa9.17□□□□□ -0.94
VARS-225ENST00000482996 TMEM70Q9BUB7 260 aa9.17□□□□□ -0.94
VARS-225ENST00000482996 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.16□□□□□ -0.94
VARS-225ENST00000482996 MT-ND6P03923 174 aa9.16□□□□□ -0.94
VARS-225ENST00000482996 RAB5AP20339 215 aa9.16□□□□□ -0.94
VARS-225ENST00000482996 FOXA3P55318 350 aaPredicted RBP9.16□□□□□ -0.94
VARS-225ENST00000482996 HBBP68871 147 aa9.16□□□□□ -0.94
VARS-225ENST00000482996 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
VARS-225ENST00000482996 TRAV26-2A0A0B4J265 109 aa9.15□□□□□ -0.94
VARS-225ENST00000482996 UBE2L6O14933 153 aa9.15□□□□□ -0.94
VARS-225ENST00000482996 AMTP48728 403 aa9.15□□□□□ -0.94
VARS-225ENST00000482996 CAMPP49913 170 aa9.15□□□□□ -0.94
VARS-225ENST00000482996 C14orf177Q52M58 125 aa9.15□□□□□ -0.94
VARS-225ENST00000482996 DNAH8Q96JB1 4490 aa9.14□□□□□ -0.95
VARS-225ENST00000482996 COLCA2A8K830 154 aa9.14□□□□□ -0.95
VARS-225ENST00000482996 HLA-DQA1P01909 254 aa9.14□□□□□ -0.95
VARS-225ENST00000482996 CLPSL2Q6UWE3 100 aa9.14□□□□□ -0.95
VARS-225ENST00000482996 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
VARS-225ENST00000482996 PRR34Q9NV39 138 aa9.14□□□□□ -0.95
VARS-225ENST00000482996 A0A1B0GUV1 79 aa9.13□□□□□ -0.95
VARS-225ENST00000482996 C1orf196B1AJZ1 125 aa9.13□□□□□ -0.95
VARS-225ENST00000482996 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
VARS-225ENST00000482996 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
VARS-225ENST00000482996 YPEL4Q96NS1 127 aa9.13□□□□□ -0.95
VARS-225ENST00000482996 TRAPPC1Q9Y5R8 145 aa9.13□□□□□ -0.95
VARS-225ENST00000482996 FAT1Q14517 4588 aa9.13□□□□□ -0.95
VARS-225ENST00000482996 DEFB104AQ8WTQ1 72 aa9.12□□□□□ -0.95
VARS-225ENST00000482996 GNB1LQ9BYB4 327 aa9.12□□□□□ -0.95
VARS-225ENST00000482996 TMEM191AQ9H0A3 160 aa9.12□□□□□ -0.95
VARS-225ENST00000482996 NCR2O95944 276 aa9.11□□□□□ -0.95
VARS-225ENST00000482996 RAB5BP61020 215 aa9.11□□□□□ -0.95
VARS-225ENST00000482996 REG3AQ06141 175 aa9.11□□□□□ -0.95
VARS-225ENST00000482996 C20orf203Q8NBC4 194 aa9.11□□□□□ -0.95
VARS-225ENST00000482996 TRAV8-4A0A0B4J246 113 aa9.1□□□□□ -0.95
VARS-225ENST00000482996 A0A1B0GXF2 115 aa9.1□□□□□ -0.95
VARS-225ENST00000482996 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
VARS-225ENST00000482996 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
VARS-225ENST00000482996 APCSP02743 223 aa9.1□□□□□ -0.95
VARS-225ENST00000482996 FABP9Q0Z7S8 132 aa9.1□□□□□ -0.95
VARS-225ENST00000482996 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
VARS-225ENST00000482996 IGLV4-60A0A075B6I1 120 aa9.09□□□□□ -0.95
VARS-225ENST00000482996 TRBV6-5A0A0K0K1A5 114 aa9.09□□□□□ -0.95
VARS-225ENST00000482996 PMCHP20382 165 aa9.09□□□□□ -0.95
VARS-225ENST00000482996 HAMPP81172 84 aa9.09□□□□□ -0.95
VARS-225ENST00000482996 AMMECR1LQ6DCA0 310 aa9.09□□□□□ -0.95
VARS-225ENST00000482996 MRAP2Q96G30 205 aa9.09□□□□□ -0.95
VARS-225ENST00000482996 ST20Q9HBF5 79 aa9.09□□□□□ -0.95
VARS-225ENST00000482996 FAM30AQ9NZY2 134 aa9.09□□□□□ -0.95
VARS-225ENST00000482996 IGLV10-54A0A075B6I4 117 aa9.08□□□□□ -0.96
VARS-225ENST00000482996 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
VARS-225ENST00000482996 I3L3M4 83 aa9.08□□□□□ -0.96
VARS-225ENST00000482996 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms