RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ZNF56Q15929 161 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 IQCJQ1A5X6 159 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 TTC32Q5I0X7 151 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 FAM74A4Q5TZK3 123 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 SLC25A29Q8N8R3 303 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 PRSS3P2Q8NHM4 247 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 CHCHD1Q96BP2 118 aaKnown RBP5.66□□□□□ -1.5
HDAC6-221ENST00000477561 MAP1LC3AQ9H492 121 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 JPT2Q9H910 190 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 TNFRSF18Q9Y5U5 241 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 KIAA1109Q2LD37 5005 aa5.66□□□□□ -1.5
HDAC6-221ENST00000477561 LOC105371267A0A1B0GV96 52 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 SMKR1H3BMG3 65 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 HSBP1O75506 76 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 SERF1AO75920 110 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 NCR2O95944 276 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 NPYP01303 97 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 CRYGDP07320 174 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 LINC00614P0C842 121 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 PMCHP20382 165 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 RNASEKQ6P5S7 137 aaKnown RBP5.65□□□□□ -1.5
HDAC6-221ENST00000477561 ZFP2Q6ZN57 461 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 Q6ZSN1 163 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 FA2HQ7L5A8 372 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 NIT1Q86X76 327 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 WFDC10BQ8IUB3 73 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 HIST3H2BBQ8N257 126 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 TMEM18Q96B42 140 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 C20orf78Q9BR46 151 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 SAMD10Q9BYL1 202 aa5.65□□□□□ -1.5
HDAC6-221ENST00000477561 TRAV26-2A0A0B4J265 109 aa5.64□□□□□ -1.51
HDAC6-221ENST00000477561 PRSS47A8MTI9 375 aa5.64□□□□□ -1.51
HDAC6-221ENST00000477561 LINC00315P59091 139 aa5.64□□□□□ -1.51
HDAC6-221ENST00000477561 PDZD11Q5EBL8 140 aa5.64□□□□□ -1.51
HDAC6-221ENST00000477561 SUMO4Q6EEV6 95 aa5.64□□□□□ -1.51
HDAC6-221ENST00000477561 NRACQ8N912 160 aa5.64□□□□□ -1.51
HDAC6-221ENST00000477561 PACRGQ96M98 296 aaPredicted RBP5.64□□□□□ -1.51
HDAC6-221ENST00000477561 PRADC1Q9BSG0 188 aa5.64□□□□□ -1.51
HDAC6-221ENST00000477561 NXT2Q9NPJ8 142 aaKnown RBP5.64□□□□□ -1.51
HDAC6-221ENST00000477561 LRP1BQ9NZR2 4599 aa5.63□□□□□ -1.51
HDAC6-221ENST00000477561 LOC389332A0A1B0GUA5 103 aa5.63□□□□□ -1.51
HDAC6-221ENST00000477561 TRBV6-4A0A1B0GX49 114 aa5.63□□□□□ -1.51
HDAC6-221ENST00000477561 SUMO2P61956 95 aaKnown RBP5.63□□□□□ -1.51
HDAC6-221ENST00000477561 RPL32P62910 135 aaKnown RBP5.63□□□□□ -1.51
HDAC6-221ENST00000477561 RHOHQ15669 191 aa5.63□□□□□ -1.51
HDAC6-221ENST00000477561 Q8N8P6 123 aa5.63□□□□□ -1.51
HDAC6-221ENST00000477561 ST20Q9HBF5 79 aa5.63□□□□□ -1.51
HDAC6-221ENST00000477561 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
HDAC6-221ENST00000477561 Q9UF83 564 aa5.63□□□□□ -1.51
HDAC6-221ENST00000477561 DNAH5Q8TE73 4624 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 TRBV6-5A0A0K0K1A5 114 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 GAGE12JA6NER3 117 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 K7EMI3 77 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 M0QY20 66 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 NUPR1O60356 82 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 FABP4P15090 132 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 IFI27P40305 119 aaPredicted RBP5.62□□□□□ -1.51
HDAC6-221ENST00000477561 AMTP48728 403 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 AKR1D1P51857 326 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 LINC00310P59036 64 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 GAGE1Q13065 139 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 GAGE4Q13068 117 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 GAGE5Q13069 117 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 GAGE13Q4V321 117 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 UFSP1Q6NVU6 142 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 DNAJC30Q96LL9 226 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 HIST1H2BLQ99880 126 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 SMIM2Q9BVW6 85 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 NIT2Q9NQR4 276 aa5.62□□□□□ -1.51
HDAC6-221ENST00000477561 TRAV9-2A0A087WT02 112 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 C16orf90A8MZG2 172 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 VCYO14598 125 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 TCAPO15273 167 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 GAS8-AS1O95177 125 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 SH2D6Q7Z4S9 175 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 SPATA12Q7Z6I5 190 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 ATP6V0E2Q8NHE4 81 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 RPL39LQ96EH5 51 aaKnown RBP5.61□□□□□ -1.51
HDAC6-221ENST00000477561 URB1-AS1Q96HZ7 61 aa5.61□□□□□ -1.51
HDAC6-221ENST00000477561 TRAV8-6A0A0B4J262 113 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 IGHV1-24A0A0C4DH33 117 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 TRBV10-1A0A0K0K1A3 114 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 IFITM10A6NMD0 228 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 IGHV3-30P01768 117 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 IGHV3-33P01772 117 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 DNAH10OSP0CZ25 163 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 IGHV3-30-3P0DP02 117 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 IGHV3-30-5P0DP03 117 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 G0S2P27469 103 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 FUSP35637 526 aaKnown RBP eCLIP5.6□□□□□ -1.51
HDAC6-221ENST00000477561 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 LAGE3Q14657 143 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 ORMDL2Q53FV1 153 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 Q6ZRN7 208 aaPredicted RBP5.6□□□□□ -1.51
HDAC6-221ENST00000477561 OR10D4PQ8NGN7 298 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 KIR2DL4Q99706 377 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 GTSF1LQ9H1H1 148 aa5.6□□□□□ -1.51
HDAC6-221ENST00000477561 IGHV3-38A0A0C4DH36 116 aa5.59□□□□□ -1.51
HDAC6-221ENST00000477561 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms