RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 CHCHD7Q9BUK0 85 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
CASC3-204ENST00000474190 TNFRSF18Q9Y5U5 241 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 ABCA13Q86UQ4 5058 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 APCSP02743 223 aa7.02□□□□□ -1.29
CASC3-204ENST00000474190 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
CASC3-204ENST00000474190 ESDP10768 282 aa7.02□□□□□ -1.29
CASC3-204ENST00000474190 ORMDL3Q8N138 153 aa7.02□□□□□ -1.29
CASC3-204ENST00000474190 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
CASC3-204ENST00000474190 URB1-AS1Q96HZ7 61 aa7.02□□□□□ -1.29
CASC3-204ENST00000474190 Q9H8V8 135 aa7.02□□□□□ -1.29
CASC3-204ENST00000474190 HECTD4Q9Y4D8 3996 aa7.02□□□□□ -1.29
CASC3-204ENST00000474190 MT-ND6P03923 174 aa7.01□□□□□ -1.29
CASC3-204ENST00000474190 S100A1P23297 94 aa7.01□□□□□ -1.29
CASC3-204ENST00000474190 NIT1Q86X76 327 aa7.01□□□□□ -1.29
CASC3-204ENST00000474190 SMIM2Q9BVW6 85 aa7.01□□□□□ -1.29
CASC3-204ENST00000474190 ST20Q9HBF5 79 aa7.01□□□□□ -1.29
CASC3-204ENST00000474190 DNAH5Q8TE73 4624 aa7□□□□□ -1.29
CASC3-204ENST00000474190 PKD1P98161 4303 aa7□□□□□ -1.29
CASC3-204ENST00000474190 LINC01546A6NGU7 62 aa7□□□□□ -1.29
CASC3-204ENST00000474190 FABP9Q0Z7S8 132 aa7□□□□□ -1.29
CASC3-204ENST00000474190 COX19Q49B96 90 aa7□□□□□ -1.29
CASC3-204ENST00000474190 LINC01556Q5JQF7 62 aa7□□□□□ -1.29
CASC3-204ENST00000474190 LAMTOR2Q9Y2Q5 125 aa7□□□□□ -1.29
CASC3-204ENST00000474190 DYNC1H1Q14204 4646 aaKnown RBP7□□□□□ -1.29
CASC3-204ENST00000474190 I3L3M4 83 aa6.99□□□□□ -1.29
CASC3-204ENST00000474190 VCYO14598 125 aa6.99□□□□□ -1.29
CASC3-204ENST00000474190 PPP1R17O96001 155 aa6.99□□□□□ -1.29
CASC3-204ENST00000474190 RAB5AP20339 215 aa6.99□□□□□ -1.29
CASC3-204ENST00000474190 KRTAP3-3Q9BYR6 98 aa6.99□□□□□ -1.29
CASC3-204ENST00000474190 KRTAP3-2Q9BYR7 98 aa6.99□□□□□ -1.29
CASC3-204ENST00000474190 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
CASC3-204ENST00000474190 NBDYA0A0U1RRE5 68 aa6.98□□□□□ -1.29
CASC3-204ENST00000474190 SIVA1O15304 175 aa6.98□□□□□ -1.29
CASC3-204ENST00000474190 TRGC2P03986 189 aa6.98□□□□□ -1.29
CASC3-204ENST00000474190 LINC00310P59036 64 aa6.98□□□□□ -1.29
CASC3-204ENST00000474190 COTL1Q14019 142 aa6.98□□□□□ -1.29
CASC3-204ENST00000474190 MPV17L2Q567V2 206 aa6.98□□□□□ -1.29
CASC3-204ENST00000474190 UBE2DNLQ8IWF7 75 aa6.98□□□□□ -1.29
CASC3-204ENST00000474190 PKHD1P08F94 4074 aa6.98□□□□□ -1.29
CASC3-204ENST00000474190 IGLV4-60A0A075B6I1 120 aa6.97□□□□□ -1.29
CASC3-204ENST00000474190 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.97□□□□□ -1.29
CASC3-204ENST00000474190 IGHV1-24A0A0C4DH33 117 aa6.97□□□□□ -1.29
CASC3-204ENST00000474190 LOC389332A0A1B0GUA5 103 aa6.97□□□□□ -1.29
CASC3-204ENST00000474190 IGKV2-29A2NJV5 120 aaPredicted RBP6.97□□□□□ -1.29
CASC3-204ENST00000474190 TCAPO15273 167 aa6.97□□□□□ -1.29
CASC3-204ENST00000474190 PMCHP20382 165 aa6.97□□□□□ -1.29
CASC3-204ENST00000474190 IFI27P40305 119 aaPredicted RBP6.97□□□□□ -1.29
CASC3-204ENST00000474190 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
CASC3-204ENST00000474190 Q8N8P6 123 aa6.97□□□□□ -1.29
CASC3-204ENST00000474190 C20orf203Q8NBC4 194 aa6.97□□□□□ -1.29
CASC3-204ENST00000474190 C18orf32Q8TCD1 76 aa6.97□□□□□ -1.29
CASC3-204ENST00000474190 TRBV25-1A0A075B6N4 114 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 A0A096LNJ9 63 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 M0R2N4 97 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 AMTP48728 403 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 RBX1P62877 108 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 GAGE6Q13070 117 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 TMEM97Q5BJF2 176 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 Q8N976 141 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 TMEM243Q9BU79 118 aa6.96□□□□□ -1.3
CASC3-204ENST00000474190 TRAV8-6A0A0B4J262 113 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 A0A1B0GUV1 79 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 RTL8CO15255 209 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 IGHV3-30P01768 117 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 IGHV3-33P01772 117 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 IGHV3-30-3P0DP02 117 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 IGHV3-30-5P0DP03 117 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 RPL39P62891 51 aaKnown RBP6.95□□□□□ -1.3
CASC3-204ENST00000474190 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
CASC3-204ENST00000474190 MAP1LC3AQ9H492 121 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 PRR34Q9NV39 138 aa6.95□□□□□ -1.3
CASC3-204ENST00000474190 IBA57-AS1B1ANH7 110 aa6.94□□□□□ -1.3
CASC3-204ENST00000474190 KRTAP26-1Q6PEX3 210 aa6.94□□□□□ -1.3
CASC3-204ENST00000474190 CHCHD5Q9BSY4 110 aa6.94□□□□□ -1.3
CASC3-204ENST00000474190 UBE2D4Q9Y2X8 147 aa6.94□□□□□ -1.3
CASC3-204ENST00000474190 LRP1BQ9NZR2 4599 aa6.94□□□□□ -1.3
CASC3-204ENST00000474190 H7C423 109 aa6.93□□□□□ -1.3
CASC3-204ENST00000474190 FGF6P10767 208 aa6.93□□□□□ -1.3
CASC3-204ENST00000474190 KIR2DL4Q99706 377 aa6.93□□□□□ -1.3
CASC3-204ENST00000474190 NXT2Q9NPJ8 142 aaKnown RBP6.93□□□□□ -1.3
CASC3-204ENST00000474190 NUPR1O60356 82 aa6.92□□□□□ -1.3
CASC3-204ENST00000474190 Q0VG73 95 aa6.92□□□□□ -1.3
CASC3-204ENST00000474190 MAPKAPK5-AS1Q8N8E1 139 aa6.92□□□□□ -1.3
CASC3-204ENST00000474190 OPRPNQ99935 248 aaPredicted RBP6.92□□□□□ -1.3
CASC3-204ENST00000474190 KLK12Q9UKR0 248 aa6.92□□□□□ -1.3
CASC3-204ENST00000474190 IGIPA6NJ69 53 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 K7EP13 123 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST1H2BKO60814 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST1H2BJP06899 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST1H2BOP23527 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 FCER1GP30273 86 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST1H2BBP33778 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST1H2BDP58876 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST1H2BCP62807 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 LAGE3Q14657 143 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST2H2BEQ16778 126 aa6.91□□□□□ -1.3
CASC3-204ENST00000474190 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.91□□□□□ -1.3
CASC3-204ENST00000474190 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms