RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 COX6B1P14854 86 aa-1.97□□□□□ -2.72
PRPF40A-207ENST00000471701 SPRR2EP22531 72 aa-1.97□□□□□ -2.72
PRPF40A-207ENST00000471701 CCL18P55774 89 aa-1.97□□□□□ -2.72
PRPF40A-207ENST00000471701 UBE2G1P62253 170 aa-1.97□□□□□ -2.72
PRPF40A-207ENST00000471701 PIGYQ3MUY2 71 aa-1.97□□□□□ -2.72
PRPF40A-207ENST00000471701 RPL7L1Q6DKI1 246 aaKnown RBP-1.97□□□□□ -2.72
PRPF40A-207ENST00000471701 SDF2Q99470 211 aa-1.97□□□□□ -2.72
PRPF40A-207ENST00000471701 PBRM1Q86U86 1689 aa-1.97□□□□□ -2.73
PRPF40A-207ENST00000471701 MYH13Q9UKX3 1938 aa-1.97□□□□□ -2.73
PRPF40A-207ENST00000471701 BICRAQ9NZM4 1560 aa-1.98□□□□□ -2.73
PRPF40A-207ENST00000471701 ZNF236Q9UL36 1845 aa-1.98□□□□□ -2.73
PRPF40A-207ENST00000471701 M0R129 80 aa-1.98□□□□□ -2.73
PRPF40A-207ENST00000471701 TCTE3Q8IZS6 198 aa-1.98□□□□□ -2.73
PRPF40A-207ENST00000471701 SMPXQ9UHP9 88 aa-1.98□□□□□ -2.73
PRPF40A-207ENST00000471701 HIVEP1P15822 2718 aa-1.99□□□□□ -2.73
PRPF40A-207ENST00000471701 TRBV20-1A0A075B6N2 111 aa-1.99□□□□□ -2.73
PRPF40A-207ENST00000471701 A0A1B0GV72 72 aa-1.99□□□□□ -2.73
PRPF40A-207ENST00000471701 RPS28P62857 69 aaKnown RBP-1.99□□□□□ -2.73
PRPF40A-207ENST00000471701 TFAMQ00059 246 aaKnown RBP-1.99□□□□□ -2.73
PRPF40A-207ENST00000471701 PPP1R2P3Q6NXS1 205 aa-1.99□□□□□ -2.73
PRPF40A-207ENST00000471701 MAGOHBQ96A72 148 aaKnown RBP-1.99□□□□□ -2.73
PRPF40A-207ENST00000471701 HIGD1AQ9Y241 93 aa-1.99□□□□□ -2.73
PRPF40A-207ENST00000471701 LRRC37A2A6NM11 1700 aa-2□□□□□ -2.73
PRPF40A-207ENST00000471701 IFNA17P01571 189 aa-2□□□□□ -2.73
PRPF40A-207ENST00000471701 SCTP09683 121 aa-2□□□□□ -2.73
PRPF40A-207ENST00000471701 S100GP29377 79 aa-2□□□□□ -2.73
PRPF40A-207ENST00000471701 CMPK1P30085 196 aa-2□□□□□ -2.73
PRPF40A-207ENST00000471701 SPTSSBQ8NFR3 76 aa-2□□□□□ -2.73
PRPF40A-207ENST00000471701 LINC00312Q9Y6C7 94 aa-2□□□□□ -2.73
PRPF40A-207ENST00000471701 ZNF818PQ6ZRF7 136 aa-2.01□□□□□ -2.73
PRPF40A-207ENST00000471701 KDM5AP29375 1690 aaKnown RBP-2.02□□□□□ -2.73
PRPF40A-207ENST00000471701 A0A1B0GX51 115 aa-2.02□□□□□ -2.73
PRPF40A-207ENST00000471701 A6NIN4 97 aa-2.02□□□□□ -2.73
PRPF40A-207ENST00000471701 H0YJX3 145 aa-2.02□□□□□ -2.73
PRPF40A-207ENST00000471701 CASKIN1Q8WXD9 1431 aa-2.02□□□□□ -2.73
PRPF40A-207ENST00000471701 MYH8P13535 1937 aa-2.03□□□□□ -2.73
PRPF40A-207ENST00000471701 ARHGEF10O15013 1369 aa-2.03□□□□□ -2.73
PRPF40A-207ENST00000471701 MRC1P22897 1456 aa-2.03□□□□□ -2.73
PRPF40A-207ENST00000471701 M0R135 149 aa-2.04□□□□□ -2.74
PRPF40A-207ENST00000471701 KLK9Q2XQG4 91 aa-2.04□□□□□ -2.74
PRPF40A-207ENST00000471701 DNAJC13O75165 2243 aa-2.05□□□□□ -2.74
PRPF40A-207ENST00000471701 NWD2Q9ULI1 1742 aa-2.05□□□□□ -2.74
PRPF40A-207ENST00000471701 PKD1P98161 4303 aa-2.05□□□□□ -2.74
PRPF40A-207ENST00000471701 CTXND1A0A1B0GTU2 59 aa-2.05□□□□□ -2.74
PRPF40A-207ENST00000471701 PPP1R17O96001 155 aa-2.05□□□□□ -2.74
PRPF40A-207ENST00000471701 S100A7L2Q5SY68 101 aa-2.05□□□□□ -2.74
PRPF40A-207ENST00000471701 SMIM4Q8WVI0 70 aa-2.05□□□□□ -2.74
PRPF40A-207ENST00000471701 SKA2Q8WVK7 121 aaPredicted RBP-2.05□□□□□ -2.74
PRPF40A-207ENST00000471701 DAPK1P53355 1430 aa-2.06□□□□□ -2.74
PRPF40A-207ENST00000471701 EPG5Q9HCE0 2579 aa-2.06□□□□□ -2.74
PRPF40A-207ENST00000471701 FAM236AA0A1B0GUQ0 79 aa-2.06□□□□□ -2.74
PRPF40A-207ENST00000471701 FAM236BA0A1B0GV22 79 aa-2.06□□□□□ -2.74
PRPF40A-207ENST00000471701 SPINK4O60575 86 aa-2.06□□□□□ -2.74
PRPF40A-207ENST00000471701 PITX3O75364 302 aa-2.06□□□□□ -2.74
PRPF40A-207ENST00000471701 NCS1P62166 190 aa-2.06□□□□□ -2.74
PRPF40A-207ENST00000471701 ADGRB1O14514 1584 aa-2.06□□□□□ -2.74
PRPF40A-207ENST00000471701 PXDNQ92626 1479 aa-2.07□□□□□ -2.74
PRPF40A-207ENST00000471701 Q6JHZ5 121 aa-2.07□□□□□ -2.74
PRPF40A-207ENST00000471701 R4GMQ9 66 aa-2.07□□□□□ -2.74
PRPF40A-207ENST00000471701 IL5P05113 134 aa-2.08□□□□□ -2.74
PRPF40A-207ENST00000471701 FABP1P07148 127 aa-2.08□□□□□ -2.74
PRPF40A-207ENST00000471701 SAR1AQ9NR31 198 aa-2.08□□□□□ -2.74
PRPF40A-207ENST00000471701 CBLN1P23435 193 aa-2.09□□□□□ -2.74
PRPF40A-207ENST00000471701 DEFB123Q8N688 67 aa-2.09□□□□□ -2.74
PRPF40A-207ENST00000471701 CENPHQ9H3R5 247 aa-2.09□□□□□ -2.74
PRPF40A-207ENST00000471701 CCL8P80075 99 aa-2.1□□□□□ -2.75
PRPF40A-207ENST00000471701 LINC00472Q9H8W2 130 aa-2.1□□□□□ -2.75
PRPF40A-207ENST00000471701 DOCK1Q14185 1865 aa-2.1□□□□□ -2.75
PRPF40A-207ENST00000471701 CDK5RAP2Q96SN8 1893 aa-2.1□□□□□ -2.75
PRPF40A-207ENST00000471701 FAT3Q8TDW7 4589 aa-2.1□□□□□ -2.75
PRPF40A-207ENST00000471701 TNFP01375 233 aa-2.11□□□□□ -2.75
PRPF40A-207ENST00000471701 PIPP12273 146 aaPredicted RBP-2.11□□□□□ -2.75
PRPF40A-207ENST00000471701 Q6ZUT4 128 aa-2.11□□□□□ -2.75
PRPF40A-207ENST00000471701 DEFB105AQ8NG35 78 aa-2.11□□□□□ -2.75
PRPF40A-207ENST00000471701 DDA1Q9BW61 102 aa-2.11□□□□□ -2.75
PRPF40A-207ENST00000471701 GINS2Q9Y248 185 aa-2.11□□□□□ -2.75
PRPF40A-207ENST00000471701 TMEM2Q9UHN6 1383 aa-2.11□□□□□ -2.75
PRPF40A-207ENST00000471701 SBF2Q86WG5 1849 aa-2.12□□□□□ -2.75
PRPF40A-207ENST00000471701 MYH6P13533 1939 aa-2.12□□□□□ -2.75
PRPF40A-207ENST00000471701 TSTD3H0UI37 97 aa-2.12□□□□□ -2.75
PRPF40A-207ENST00000471701 TMEM170BQ5T4T1 132 aa-2.12□□□□□ -2.75
PRPF40A-207ENST00000471701 CTAGE3PQ8IX95 158 aa-2.12□□□□□ -2.75
PRPF40A-207ENST00000471701 USP9YO00507 2555 aaPredicted RBP-2.12□□□□□ -2.75
PRPF40A-207ENST00000471701 DNAH3Q8TD57 4116 aa-2.13□□□□□ -2.75
PRPF40A-207ENST00000471701 MRPL40Q9NQ50 206 aaKnown RBP-2.13□□□□□ -2.75
PRPF40A-207ENST00000471701 V9GYQ6 96 aa-2.13□□□□□ -2.75
PRPF40A-207ENST00000471701 KIF21AQ7Z4S6 1674 aa-2.13□□□□□ -2.75
PRPF40A-207ENST00000471701 GAPVD1Q14C86 1478 aa-2.14□□□□□ -2.75
PRPF40A-207ENST00000471701 CCDC153Q494R4 210 aa-2.14□□□□□ -2.75
PRPF40A-207ENST00000471701 AMELXQ99217 191 aa-2.14□□□□□ -2.75
PRPF40A-207ENST00000471701 PSMG3Q9BT73 122 aaPredicted RBP-2.14□□□□□ -2.75
PRPF40A-207ENST00000471701 SEC11CQ9BY50 192 aa-2.14□□□□□ -2.75
PRPF40A-207ENST00000471701 HSPB11Q9Y547 144 aa-2.14□□□□□ -2.75
PRPF40A-207ENST00000471701 EPPK1P58107 5090 aaKnown RBP-2.14□□□□□ -2.75
PRPF40A-207ENST00000471701 TACC2O95359 2948 aa-2.14□□□□□ -2.75
PRPF40A-207ENST00000471701 PKHD1L1Q86WI1 4243 aa-2.15□□□□□ -2.75
PRPF40A-207ENST00000471701 MUC17Q685J3 4493 aa-2.15□□□□□ -2.75
PRPF40A-207ENST00000471701 SNCGO76070 127 aa-2.15□□□□□ -2.75
PRPF40A-207ENST00000471701 IGLC6P0CF74 106 aa-2.15□□□□□ -2.75
PRPF40A-207ENST00000471701 RRAS2P62070 204 aaPredicted RBP-2.15□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 399.6 ms