RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SCRT2Q9NQ03 307 aa9.31□□□□□ -0.92
HMGN1-211ENST00000471260 MRPL16Q9NX20 251 aaKnown RBP9.31□□□□□ -0.92
HMGN1-211ENST00000471260 HHLA3Q9XRX5 114 aa9.31□□□□□ -0.92
HMGN1-211ENST00000471260 PKD1P98161 4303 aa9.31□□□□□ -0.92
HMGN1-211ENST00000471260 DNAH11Q96DT5 4516 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 TRAV21A0A0B4J279 112 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 D6R8Y8 96 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 CRYBA4P53673 196 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 FHL2Q14192 279 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 BATFQ16520 125 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 MRPL23Q16540 153 aaKnown RBP9.3□□□□□ -0.92
HMGN1-211ENST00000471260 MRPL51Q4U2R6 128 aaKnown RBP9.3□□□□□ -0.92
HMGN1-211ENST00000471260 MUC21Q5SSG8 566 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 MAP1LC3AQ9H492 121 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
HMGN1-211ENST00000471260 MDFICQ9P1T7 246 aa9.3□□□□□ -0.92
HMGN1-211ENST00000471260 CACNG7P62955 275 aa9.29□□□□□ -0.92
HMGN1-211ENST00000471260 TPPP3Q9BW30 176 aa9.29□□□□□ -0.92
HMGN1-211ENST00000471260 KIAA1109Q2LD37 5005 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 TRGV4A0A0C4DH28 118 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 SIVA1O15304 175 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 COX8AP10176 69 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 G0S2P27469 103 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 CKS2P33552 79 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 NEGR1Q7Z3B1 354 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 AMN1Q8IY45 258 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 STPG4Q8N801 248 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
HMGN1-211ENST00000471260 A0A096LNJ9 63 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 PRSS47A8MTI9 375 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 M0R2P5 195 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 ORM1P02763 201 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 TWIST1Q15672 202 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 MAJINQ3KP22 176 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 SMIM15Q7Z3B0 74 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 KRTAP1-5Q9BYS1 174 aa9.27□□□□□ -0.93
HMGN1-211ENST00000471260 DYNC1H1Q14204 4646 aaKnown RBP9.26□□□□□ -0.93
HMGN1-211ENST00000471260 TRAV4A0A0B4J268 109 aa9.26□□□□□ -0.93
HMGN1-211ENST00000471260 IGHV3-16A0A0C4DH30 117 aa9.26□□□□□ -0.93
HMGN1-211ENST00000471260 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
HMGN1-211ENST00000471260 K7EP13 123 aa9.26□□□□□ -0.93
HMGN1-211ENST00000471260 SNAI2O43623 268 aa9.26□□□□□ -0.93
HMGN1-211ENST00000471260 IFI27P40305 119 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-211ENST00000471260 ZNF80P51504 273 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-211ENST00000471260 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
HMGN1-211ENST00000471260 ZNF479Q96JC4 524 aa9.26□□□□□ -0.93
HMGN1-211ENST00000471260 KRTAP17-1Q9BYP8 105 aa9.26□□□□□ -0.93
HMGN1-211ENST00000471260 TMSB15BA0A087X1C1 80 aa9.25□□□□□ -0.93
HMGN1-211ENST00000471260 hDV102S1A0JD36 115 aa9.25□□□□□ -0.93
HMGN1-211ENST00000471260 GNRH2O43555 120 aa9.25□□□□□ -0.93
HMGN1-211ENST00000471260 CIDEAO60543 219 aa9.25□□□□□ -0.93
HMGN1-211ENST00000471260 NXPH4O95158 308 aa9.25□□□□□ -0.93
HMGN1-211ENST00000471260 HINT1P49773 126 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-211ENST00000471260 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
HMGN1-211ENST00000471260 RNF185Q96GF1 192 aa9.25□□□□□ -0.93
HMGN1-211ENST00000471260 K7EMI3 77 aa9.24□□□□□ -0.93
HMGN1-211ENST00000471260 K7EQD1 137 aa9.24□□□□□ -0.93
HMGN1-211ENST00000471260 NPYP01303 97 aa9.24□□□□□ -0.93
HMGN1-211ENST00000471260 SEC11AP67812 179 aa9.24□□□□□ -0.93
HMGN1-211ENST00000471260 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
HMGN1-211ENST00000471260 OR4C5Q8NGB2 326 aa9.24□□□□□ -0.93
HMGN1-211ENST00000471260 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
HMGN1-211ENST00000471260 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
HMGN1-211ENST00000471260 CDK2AP2O75956 126 aa9.23□□□□□ -0.93
HMGN1-211ENST00000471260 GYPEP15421 78 aa9.23□□□□□ -0.93
HMGN1-211ENST00000471260 FCER1GP30273 86 aa9.23□□□□□ -0.93
HMGN1-211ENST00000471260 BVES-AS1Q5T3Y7 98 aa9.23□□□□□ -0.93
HMGN1-211ENST00000471260 Q8N8P6 123 aa9.23□□□□□ -0.93
HMGN1-211ENST00000471260 MRAP2Q96G30 205 aa9.23□□□□□ -0.93
HMGN1-211ENST00000471260 ATP5LO75964 103 aa9.22□□□□□ -0.93
HMGN1-211ENST00000471260 NPSP0C0P6 89 aa9.22□□□□□ -0.93
HMGN1-211ENST00000471260 LINC00315P59091 139 aa9.22□□□□□ -0.93
HMGN1-211ENST00000471260 UBE2V1Q13404 147 aa9.22□□□□□ -0.93
HMGN1-211ENST00000471260 NFE4Q86UQ8 179 aa9.22□□□□□ -0.93
HMGN1-211ENST00000471260 PTH2Q96A98 100 aa9.22□□□□□ -0.93
HMGN1-211ENST00000471260 IGKV3D-20A0A0C4DH25 116 aa9.21□□□□□ -0.94
HMGN1-211ENST00000471260 TNFRSF6BO95407 300 aa9.21□□□□□ -0.94
HMGN1-211ENST00000471260 BOD1L2Q8IYS8 172 aa9.21□□□□□ -0.94
HMGN1-211ENST00000471260 LINC01549A6NIU2 74 aa9.2□□□□□ -0.94
HMGN1-211ENST00000471260 M0R381 172 aa9.2□□□□□ -0.94
HMGN1-211ENST00000471260 PPP1R17O96001 155 aa9.2□□□□□ -0.94
HMGN1-211ENST00000471260 FGF6P10767 208 aa9.2□□□□□ -0.94
HMGN1-211ENST00000471260 TIRAPP58753 221 aa9.2□□□□□ -0.94
HMGN1-211ENST00000471260 HSD52Q0P140 79 aa9.2□□□□□ -0.94
HMGN1-211ENST00000471260 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
HMGN1-211ENST00000471260 MPV17L2Q567V2 206 aa9.2□□□□□ -0.94
HMGN1-211ENST00000471260 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-211ENST00000471260 LOC389332A0A1B0GUA5 103 aa9.19□□□□□ -0.94
HMGN1-211ENST00000471260 A6NDN8 102 aa9.19□□□□□ -0.94
HMGN1-211ENST00000471260 GATA1P15976 413 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-211ENST00000471260 EVI2AP22794 236 aa9.19□□□□□ -0.94
HMGN1-211ENST00000471260 C2orf91Q6ZV80 131 aa9.19□□□□□ -0.94
HMGN1-211ENST00000471260 C9orf85Q96MD7 179 aa9.19□□□□□ -0.94
HMGN1-211ENST00000471260 TRBV6-4A0A1B0GX49 114 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 H0Y8G0 127 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 RS1O15537 224 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 NCR2O95944 276 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms