RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 F5H697 171 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 M0QY20 66 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 CRYGDP07320 174 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 PRB4P10163 310 aaPredicted RBP4.13□□□□□ -1.75
HDAC8-216ENST00000470998 GATA1P15976 413 aaPredicted RBP4.13□□□□□ -1.75
HDAC8-216ENST00000470998 EDN2P20800 178 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 INSL3P51460 131 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 BATFQ16520 125 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 DEFB136Q30KP8 78 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 CD300EQ496F6 205 aaPredicted RBP4.13□□□□□ -1.75
HDAC8-216ENST00000470998 BVES-AS1Q5T3Y7 98 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 ZC2HC1BQ5TFG8 222 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 HIST2H2BDQ6DRA6 164 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 NEXN-AS1Q8NBZ9 246 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 C18orf15Q96N68 181 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 DUX3Q96PT4 197 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 KRTAP4-5Q9BYR2 181 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 FAM30AQ9NZY2 134 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 HHLA3Q9XRX5 114 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 CHTOPQ9Y3Y2 248 aaKnown RBP4.13□□□□□ -1.75
HDAC8-216ENST00000470998 COX11Q9Y6N1 276 aa4.13□□□□□ -1.75
HDAC8-216ENST00000470998 PKD1L1Q8TDX9 2849 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 TRAV12-2A0A075B6T6 113 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 TRBV10-1A0A0K0K1A3 114 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 IGIPA6NJ69 53 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 I3L3M4 83 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 K7EIL1 84 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 GAS8-AS1O95177 125 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 PRB2P02812 416 aaPredicted RBP4.12□□□□□ -1.75
HDAC8-216ENST00000470998 NMUP48645 174 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 HINT1P49773 126 aaPredicted RBP4.12□□□□□ -1.75
HDAC8-216ENST00000470998 DEFB1P60022 68 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 PMVKQ15126 192 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 ODF3L2Q3SX64 289 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 C9orf66Q5T8R8 295 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 Q6ZQT7 251 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 C2orf91Q6ZV80 131 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 OR11H2Q8NH07 326 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 RPL39LQ96EH5 51 aaKnown RBP4.12□□□□□ -1.75
HDAC8-216ENST00000470998 MRPL35Q9NZE8 188 aaKnown RBP4.12□□□□□ -1.75
HDAC8-216ENST00000470998 PYGO1Q9Y3Y4 419 aa4.12□□□□□ -1.75
HDAC8-216ENST00000470998 DNAH3Q8TD57 4116 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 A0A087WWL8 130 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 C11orf86A6NJI1 115 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 KNCNA6PVL3 124 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 E9PLD3 99 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 IGKV3-20P01619 116 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 IGLV1-51P01701 117 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 IGHV3-53P01767 116 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 NHLRC4P0CG21 123 aaPredicted RBP4.11□□□□□ -1.75
HDAC8-216ENST00000470998 MPV17L2Q567V2 206 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 DEFB121Q5J5C9 76 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 FAM74A4Q5TZK3 123 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 NFE4Q86UQ8 179 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 STPG4Q8N801 248 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 C20orf203Q8NBC4 194 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 TMEM263Q8WUH6 116 aaKnown RBP4.11□□□□□ -1.75
HDAC8-216ENST00000470998 BAALCQ8WXS3 180 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 C16orf74Q96GX8 76 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 LINC01587Q99440 93 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 B9D2Q9BPU9 175 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 TMEM208Q9BTX3 173 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 SPANXA1Q9NS26 97 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 MDFICQ9P1T7 246 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 DKK2Q9UBU2 259 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 TP53TG1Q9Y2A0 90 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 VWFP04275 2813 aa4.11□□□□□ -1.75
HDAC8-216ENST00000470998 RBMY1BA6NDE4 496 aaKnown RBP4.1□□□□□ -1.75
HDAC8-216ENST00000470998 RBMY1EA6NEQ0 496 aaKnown RBP4.1□□□□□ -1.75
HDAC8-216ENST00000470998 H3BRM9 83 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 RS1O15537 224 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 SAP30O75446 220 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 RBMY1DP0C7P1 496 aaKnown RBP4.1□□□□□ -1.75
HDAC8-216ENST00000470998 ZNF25P17030 456 aaPredicted RBP4.1□□□□□ -1.75
HDAC8-216ENST00000470998 KRTAP10-11P60412 298 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 DAZ2Q13117 558 aaKnown RBP4.1□□□□□ -1.75
HDAC8-216ENST00000470998 UFSP1Q6NVU6 142 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 C18orf65Q6ZTR6 163 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 C11orf72Q8NBR9 251 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 TIMM21Q9BVV7 248 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 TM2D2Q9BX73 214 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 TNFRSF18Q9Y5U5 241 aa4.1□□□□□ -1.75
HDAC8-216ENST00000470998 NOTCH1P46531 2555 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 NOTCH3Q9UM47 2321 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 TRBV25-1A0A075B6N4 114 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 TRAV4A0A0B4J268 109 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 MYMXA0A1B0GTQ4 84 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 PRSS29PA6NIE9 313 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 TSHBP01222 138 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 RBMY1A1P0DJD3 496 aaKnown RBP4.09□□□□□ -1.75
HDAC8-216ENST00000470998 RBMY1CP0DJD4 496 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 MALP21145 153 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 FXYD7P58549 80 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 UBE2V1Q13404 147 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 RBMY1FQ15415 496 aaKnown RBP4.09□□□□□ -1.75
HDAC8-216ENST00000470998 CFAP126Q5VTH2 177 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 GTF2H5Q6ZYL4 71 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 RNASE8Q8TDE3 154 aaKnown RBP4.09□□□□□ -1.75
HDAC8-216ENST00000470998 CHAC1Q9BUX1 264 aa4.09□□□□□ -1.75
HDAC8-216ENST00000470998 CST9LQ9H4G1 147 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms