RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 NRACQ8N912 160 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 SIRPDQ9H106 197 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 KLK5Q9Y337 293 aaPredicted RBP8.07□□□□□ -1.12
CHD3-208ENST00000470531 M0R2P5 195 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 SLC25A20O43772 301 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 LY6G5BQ8NDX9 201 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 UBE2L6O14933 153 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 HOXD3P31249 432 aaPredicted RBP8.06□□□□□ -1.12
CHD3-208ENST00000470531 LMO4P61968 165 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 ZFHX3Q15911 3703 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 ODF3BA8MYP8 253 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 RHODO00212 210 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 MSMBP08118 114 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 HERVK_113P63121 156 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 ZFAND2AQ8N6M9 145 aa8.06□□□□□ -1.12
CHD3-208ENST00000470531 A0A0U1RQV1 116 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 TCL1BO95988 128 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 ZNRF2Q8NHG8 242 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 CLEC2BQ92478 149 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 NF1P21359 2839 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 IGHV1OR15-1A0A075B7D0 117 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 FAM236AA0A1B0GUQ0 79 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 FAM236BA0A1B0GV22 79 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 NDUFA4O00483 81 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 ANKRD29Q8N6D5 301 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 HIGD1BQ9P298 99 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 NDUFA12Q9UI09 145 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 HTN3P15516 51 aa8.05□□□□□ -1.12
CHD3-208ENST00000470531 FBN2P35556 2912 aa8.04□□□□□ -1.12
CHD3-208ENST00000470531 FAM223BA6NKX1 122 aa8.04□□□□□ -1.12
CHD3-208ENST00000470531 FAM223AQ8IWN6 122 aa8.04□□□□□ -1.12
CHD3-208ENST00000470531 GCN1Q92616 2671 aaKnown RBP8.04□□□□□ -1.12
CHD3-208ENST00000470531 SEC61GP60059 68 aa8.04□□□□□ -1.12
CHD3-208ENST00000470531 C9orf47Q6ZRZ4 202 aa8.04□□□□□ -1.12
CHD3-208ENST00000470531 ZNF575Q86XF7 245 aa8.04□□□□□ -1.12
CHD3-208ENST00000470531 PFN2P35080 140 aa8.04□□□□□ -1.12
CHD3-208ENST00000470531 CIRBPQ14011 172 aaKnown RBP8.03□□□□□ -1.12
CHD3-208ENST00000470531 NFE4Q86UQ8 179 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 PRIMA1Q86XR5 153 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 FLNAP21333 2647 aaKnown RBP8.03□□□□□ -1.12
CHD3-208ENST00000470531 TRBV6-1A0A0K0K1D8 114 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 DEFB130BP0DP73 79 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 DEFB130AP0DP74 79 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 PAPPA-AS1Q5QFB9 102 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 V9GYY9 64 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 TEX15Q9BXT5 2789 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 TOMM6Q96B49 74 aa8.03□□□□□ -1.12
CHD3-208ENST00000470531 RNASE3P12724 160 aaKnown RBP8.02□□□□□ -1.13
CHD3-208ENST00000470531 STHQ8IWL8 128 aa8.02□□□□□ -1.13
CHD3-208ENST00000470531 USMG5Q96IX5 58 aa8.02□□□□□ -1.13
CHD3-208ENST00000470531 CRIP2P52943 208 aaPredicted RBP8.02□□□□□ -1.13
CHD3-208ENST00000470531 FHL3Q13643 280 aa8.02□□□□□ -1.13
CHD3-208ENST00000470531 C18orf65Q6ZTR6 163 aa8.02□□□□□ -1.13
CHD3-208ENST00000470531 ESM1Q9NQ30 184 aa8.02□□□□□ -1.13
CHD3-208ENST00000470531 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
CHD3-208ENST00000470531 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
CHD3-208ENST00000470531 TMEM101Q96IK0 257 aa8.02□□□□□ -1.13
CHD3-208ENST00000470531 IGHV4OR15-8A0A075B7B6 117 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 A0A087WW49 117 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 B4DSR2 109 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 CFC1BP0CG36 223 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 CFC1P0CG37 223 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 LINC00158P58513 81 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 NEXN-AS1Q8NBZ9 246 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 TMEM190Q8WZ59 177 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 I3L3M4 83 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 CRLF1O75462 422 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 AVPP01185 164 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 NHLRC4P0CG21 123 aaPredicted RBP8.01□□□□□ -1.13
CHD3-208ENST00000470531 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
CHD3-208ENST00000470531 NSUN5P1Q3KNT7 163 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 NDUFA11Q86Y39 141 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 Q9UF83 564 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 PRO0461Q9UI25 63 aa8.01□□□□□ -1.13
CHD3-208ENST00000470531 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
CHD3-208ENST00000470531 BSNQ9UPA5 3926 aa8□□□□□ -1.13
CHD3-208ENST00000470531 TRBV7-3A0A075B6L6 115 aa8□□□□□ -1.13
CHD3-208ENST00000470531 PF4P02776 101 aa8□□□□□ -1.13
CHD3-208ENST00000470531 COX6B1P14854 86 aa8□□□□□ -1.13
CHD3-208ENST00000470531 NXPH4O95158 308 aa8□□□□□ -1.13
CHD3-208ENST00000470531 ATP6V0E2Q8NHE4 81 aa8□□□□□ -1.13
CHD3-208ENST00000470531 ITPR3Q14573 2671 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 IGLV2-18A0A075B6J9 118 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 J3QLI3 93 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 NDUFA7O95182 113 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 TRACP01848 142 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 HRNRQ86YZ3 2850 aaPredicted RBP7.99□□□□□ -1.13
CHD3-208ENST00000470531 DNAL4O96015 105 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 CARD19Q96LW7 228 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 ATRQ13535 2644 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 A0A0J9YY99 117 aa7.99□□□□□ -1.13
CHD3-208ENST00000470531 TRGV4A0A0C4DH28 118 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 Q9H8V8 135 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 ATXN8Q156A1 80 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 HIST2H2BCQ6DN03 193 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 U3KQE9 123 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 TRGV11A0A075B6L2 103 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 TINCRA0A1B0GVN0 87 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms