RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-208	ENST00000470171	MAPKAPK5-AS1	Q8N8E1	139 aa		10.23	□□□□□ -0.77
FDPS-208	ENST00000470171		V9GYV3	84 aa		10.23	□□□□□ -0.77
FDPS-208	ENST00000470171	GAGE6	Q13070	117 aa		10.22	□□□□□ -0.77
FDPS-208	ENST00000470171	ADIRF	Q15847	76 aa		10.22	□□□□□ -0.77
FDPS-208	ENST00000470171	LRP1B	Q9NZR2	4599 aa		10.21	□□□□□ -0.77
FDPS-208	ENST00000470171		I3L3M4	83 aa		10.21	□□□□□ -0.77
FDPS-208	ENST00000470171	SMAGP	Q0VAQ4	97 aa		10.21	□□□□□ -0.77
FDPS-208	ENST00000470171	NUP35	Q8NFH5	326 aa		10.21	□□□□□ -0.77
FDPS-208	ENST00000470171	ST20	Q9HBF5	79 aa		10.21	□□□□□ -0.77
FDPS-208	ENST00000470171	SMIM27	A0A1W2PRY6	76 aa		10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	LINC00862	A6NCI5	91 aa		10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	SDHAF1	A6NFY7	115 aa		10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	PPP1R2P9	O14990	202 aa		10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	ZNF25	P17030	456 aa	Predicted RBP	10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	RYR1	P21817	5038 aa		10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	PNRC1	Q12796	327 aa	Predicted RBP	10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	LINC00269	Q8N2A0	174 aa		10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	CLRN3	Q8NCR9	226 aa		10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	BAALC	Q8WXS3	180 aa		10.2	□□□□□ -0.78
FDPS-208	ENST00000470171	DNAH5	Q8TE73	4624 aa		10.19	□□□□□ -0.78
FDPS-208	ENST00000470171	TCAP	O15273	167 aa		10.19	□□□□□ -0.78
FDPS-208	ENST00000470171	APCS	P02743	223 aa		10.19	□□□□□ -0.78
FDPS-208	ENST00000470171	RAB4A	P20338	218 aa		10.19	□□□□□ -0.78
FDPS-208	ENST00000470171	PMCH	P20382	165 aa		10.19	□□□□□ -0.78
FDPS-208	ENST00000470171	KRTAP10-1	P60331	282 aa		10.19	□□□□□ -0.78
FDPS-208	ENST00000470171	REG3A	Q06141	175 aa		10.19	□□□□□ -0.78
FDPS-208	ENST00000470171	TRAV26-2	A0A0B4J265	109 aa		10.18	□□□□□ -0.78
FDPS-208	ENST00000470171		C9JQL5	133 aa		10.18	□□□□□ -0.78
FDPS-208	ENST00000470171		F8W036	122 aa		10.18	□□□□□ -0.78
FDPS-208	ENST00000470171	DGAT2L7P	Q6IED9	249 aa		10.18	□□□□□ -0.78
FDPS-208	ENST00000470171	TRBV27	A0A0K0K1C4	114 aa		10.17	□□□□□ -0.78
FDPS-208	ENST00000470171	VCY	O14598	125 aa		10.17	□□□□□ -0.78
FDPS-208	ENST00000470171	AMMECR1L	Q6DCA0	310 aa		10.17	□□□□□ -0.78
FDPS-208	ENST00000470171	C20orf203	Q8NBC4	194 aa		10.17	□□□□□ -0.78
FDPS-208	ENST00000470171	XG	P55808	180 aa		10.16	□□□□□ -0.78
FDPS-208	ENST00000470171	SRSF3	P84103	164 aa	Known RBP	10.16	□□□□□ -0.78
FDPS-208	ENST00000470171	RPL39L	Q96EH5	51 aa	Known RBP	10.16	□□□□□ -0.78
FDPS-208	ENST00000470171	TMEM101	Q96IK0	257 aa		10.16	□□□□□ -0.78
FDPS-208	ENST00000470171	BTF3L4	Q96K17	158 aa		10.16	□□□□□ -0.78
FDPS-208	ENST00000470171	POLR2K	P53803	58 aa	Known RBP	10.15	□□□□□ -0.78
FDPS-208	ENST00000470171	CLLU1	Q5K131	121 aa		10.15	□□□□□ -0.78
FDPS-208	ENST00000470171	FAM104B	Q5XKR9	115 aa		10.15	□□□□□ -0.78
FDPS-208	ENST00000470171	CFAP161	Q6P656	301 aa		10.15	□□□□□ -0.78
FDPS-208	ENST00000470171	ATP5L2	Q7Z4Y8	100 aa		10.15	□□□□□ -0.78
FDPS-208	ENST00000470171	RNF185	Q96GF1	192 aa		10.15	□□□□□ -0.78
FDPS-208	ENST00000470171	C20orf78	Q9BR46	151 aa		10.15	□□□□□ -0.78
FDPS-208	ENST00000470171	EPM2A	B3EWF7	344 aa		10.14	□□□□□ -0.79
FDPS-208	ENST00000470171	PPBP	P02775	128 aa		10.14	□□□□□ -0.79
FDPS-208	ENST00000470171	RPL32	P62910	135 aa	Known RBP	10.14	□□□□□ -0.79
FDPS-208	ENST00000470171	WFDC2	Q14508	124 aa		10.14	□□□□□ -0.79
FDPS-208	ENST00000470171	AMN1	Q8IY45	258 aa		10.14	□□□□□ -0.79
FDPS-208	ENST00000470171	ANAPC16	Q96DE5	110 aa		10.14	□□□□□ -0.79
FDPS-208	ENST00000470171	KIR2DL4	Q99706	377 aa		10.14	□□□□□ -0.79
FDPS-208	ENST00000470171	TRBV24-1	A0A075B6N3	115 aa		10.13	□□□□□ -0.79
FDPS-208	ENST00000470171	LECT2	O14960	151 aa		10.13	□□□□□ -0.79
FDPS-208	ENST00000470171	HLA-DQA1	P01909	254 aa		10.13	□□□□□ -0.79
FDPS-208	ENST00000470171	MT-ND4L	P03901	98 aa		10.13	□□□□□ -0.79
FDPS-208	ENST00000470171	HBB	P68871	147 aa		10.13	□□□□□ -0.79
FDPS-208	ENST00000470171	UQCC3	Q6UW78	93 aa		10.13	□□□□□ -0.79
FDPS-208	ENST00000470171	TMEM18	Q96B42	140 aa		10.13	□□□□□ -0.79
FDPS-208	ENST00000470171	IGLV4-60	A0A075B6I1	120 aa		10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	USP17L23	D6RBM5	183 aa		10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	FAM229A	H3BQW9	127 aa		10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	PHOX2A	O14813	284 aa		10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	CCL25	O15444	150 aa		10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	FGF6	P10767	208 aa		10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	ESD	P10768	282 aa		10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	SUMO2	P61956	95 aa	Known RBP	10.12	□□□□□ -0.79
FDPS-208	ENST00000470171		Q6ZSA8	131 aa		10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	MRPL52	Q86TS9	123 aa	Known RBP	10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	CSDC2	Q9Y534	153 aa	Known RBP	10.12	□□□□□ -0.79
FDPS-208	ENST00000470171	FCER1G	P30273	86 aa		10.11	□□□□□ -0.79
FDPS-208	ENST00000470171	FUS	P35637	526 aa	Known RBP eCLIP	10.11	□□□□□ -0.79	8e-9	■■□□□ 13.1
FDPS-208	ENST00000470171	RNASEK	Q6P5S7	137 aa	Known RBP	10.11	□□□□□ -0.79
FDPS-208	ENST00000470171	KRTAP26-1	Q6PEX3	210 aa		10.11	□□□□□ -0.79
FDPS-208	ENST00000470171	HSPG2	P98160	4391 aa		10.11	□□□□□ -0.79
FDPS-208	ENST00000470171	C7orf77	A4D0Y5	90 aa		10.1	□□□□□ -0.79
FDPS-208	ENST00000470171	CKS2	P33552	79 aa		10.1	□□□□□ -0.79
FDPS-208	ENST00000470171	CAMP	P49913	170 aa		10.1	□□□□□ -0.79
FDPS-208	ENST00000470171	OR5A1	Q8NGJ0	315 aa		10.1	□□□□□ -0.79
FDPS-208	ENST00000470171	AP5S1	Q9NUS5	200 aa		10.1	□□□□□ -0.79
FDPS-208	ENST00000470171	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.09	□□□□□ -0.79
FDPS-208	ENST00000470171	TSHB	P01222	138 aa		10.09	□□□□□ -0.79
FDPS-208	ENST00000470171	CNBP	P62633	177 aa	Known RBP	10.09	□□□□□ -0.79
FDPS-208	ENST00000470171	MRPL51	Q4U2R6	128 aa	Known RBP	10.09	□□□□□ -0.79
FDPS-208	ENST00000470171	CLPSL2	Q6UWE3	100 aa		10.09	□□□□□ -0.79
FDPS-208	ENST00000470171	NRAC	Q8N912	160 aa		10.09	□□□□□ -0.79
FDPS-208	ENST00000470171	APOB	P04114	4563 aa	Known RBP	10.08	□□□□□ -0.8
FDPS-208	ENST00000470171		A0A1B0GXF2	115 aa		10.08	□□□□□ -0.8
FDPS-208	ENST00000470171	RPS10	P46783	165 aa	Known RBP	10.08	□□□□□ -0.8
FDPS-208	ENST00000470171	IMMP2L	Q96T52	175 aa		10.08	□□□□□ -0.8
FDPS-208	ENST00000470171	LAMTOR2	Q9Y2Q5	125 aa		10.08	□□□□□ -0.8
FDPS-208	ENST00000470171	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.07	□□□□□ -0.8
FDPS-208	ENST00000470171	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.07	□□□□□ -0.8
FDPS-208	ENST00000470171	PRSS1	P07477	247 aa		10.07	□□□□□ -0.8
FDPS-208	ENST00000470171	C9orf163	Q8N9P6	203 aa		10.07	□□□□□ -0.8
FDPS-208	ENST00000470171	TIMM21	Q9BVV7	248 aa		10.07	□□□□□ -0.8
FDPS-208	ENST00000470171	TMEM242	Q9NWH2	141 aa		10.07	□□□□□ -0.8
FDPS-208	ENST00000470171	PKIG	Q9Y2B9	76 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 139 ms