RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 PPP1R17O96001 155 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 NDUFA6P56556 154 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BDP58876 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 SSTP61278 116 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BCP62807 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST2H2BEQ16778 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BHQ93079 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BNQ99877 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BMQ99879 126 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 LAMTOR2Q9Y2Q5 125 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 RNASE3P12724 160 aaKnown RBP8.29□□□□□ -1.08
HDAC6-217ENST00000469223 S100A2P29034 98 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 SRIP30626 198 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 DMRTA1Q5VZB9 504 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 FAM104BQ5XKR9 115 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 NEGR1Q7Z3B1 354 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 BAGE3Q86Y29 109 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 ORMDL3Q8N138 153 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 OR10AG1Q8NH19 301 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 C9orf85Q96MD7 179 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 DPH3P1Q9H4G8 78 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 TP53TG3Q9ULZ0 132 aa8.29□□□□□ -1.08
HDAC6-217ENST00000469223 M0R2P5 195 aa8.28□□□□□ -1.08
HDAC6-217ENST00000469223 IGHV3-53P01767 116 aa8.28□□□□□ -1.08
HDAC6-217ENST00000469223 CKS2P33552 79 aa8.28□□□□□ -1.08
HDAC6-217ENST00000469223 SLAQ13239 276 aa8.28□□□□□ -1.08
HDAC6-217ENST00000469223 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
HDAC6-217ENST00000469223 PTH2Q96A98 100 aa8.28□□□□□ -1.08
HDAC6-217ENST00000469223 MRAP2Q96G30 205 aa8.28□□□□□ -1.08
HDAC6-217ENST00000469223 GSN-AS1Q9NRJ2 163 aa8.28□□□□□ -1.08
HDAC6-217ENST00000469223 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 MUC21A0A0G2JKD1 596 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 MUC21A0A140T8X8 626 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 A8MWV9 139 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 PHOX2AO14813 284 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 Q0VG73 95 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 ZNF876PQ49A33 203 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 Q6ZQT7 251 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 C11orf72Q8NBR9 251 aa8.27□□□□□ -1.09
HDAC6-217ENST00000469223 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
HDAC6-217ENST00000469223 ALKBH7Q9BT30 221 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-217ENST00000469223 PRO0255Q9UI72 69 aa8.26□□□□□ -1.09
HDAC6-217ENST00000469223 IBA57-AS1B1ANH7 110 aa8.25□□□□□ -1.09
HDAC6-217ENST00000469223 H7C1H1 209 aa8.25□□□□□ -1.09
HDAC6-217ENST00000469223 RHODO00212 210 aa8.25□□□□□ -1.09
HDAC6-217ENST00000469223 CIDEAO60543 219 aa8.25□□□□□ -1.09
HDAC6-217ENST00000469223 CRYBA4P53673 196 aa8.25□□□□□ -1.09
HDAC6-217ENST00000469223 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
HDAC6-217ENST00000469223 KIAA1644Q3SXP7 199 aa8.25□□□□□ -1.09
HDAC6-217ENST00000469223 COA6Q5JTJ3 125 aaKnown RBP8.25□□□□□ -1.09
HDAC6-217ENST00000469223 Q6ZRU5 148 aa8.25□□□□□ -1.09
HDAC6-217ENST00000469223 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
HDAC6-217ENST00000469223 C5orf52A6NGY3 159 aa8.24□□□□□ -1.09
HDAC6-217ENST00000469223 D6R8Y8 96 aa8.24□□□□□ -1.09
HDAC6-217ENST00000469223 MGPP08493 103 aa8.24□□□□□ -1.09
HDAC6-217ENST00000469223 GYPEP15421 78 aa8.24□□□□□ -1.09
HDAC6-217ENST00000469223 RAB4AP20338 218 aa8.24□□□□□ -1.09
HDAC6-217ENST00000469223 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
HDAC6-217ENST00000469223 TMEM18Q96B42 140 aa8.24□□□□□ -1.09
HDAC6-217ENST00000469223 MAP1LC3AQ9H492 121 aa8.24□□□□□ -1.09
HDAC6-217ENST00000469223 F5H697 171 aa8.23□□□□□ -1.09
HDAC6-217ENST00000469223 K7EQD1 137 aa8.23□□□□□ -1.09
HDAC6-217ENST00000469223 PMCHP20382 165 aa8.23□□□□□ -1.09
HDAC6-217ENST00000469223 C14orf178Q8N769 122 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-217ENST00000469223 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
HDAC6-217ENST00000469223 C18orf32Q8TCD1 76 aa8.23□□□□□ -1.09
HDAC6-217ENST00000469223 CHCHD1Q96BP2 118 aaKnown RBP8.23□□□□□ -1.09
HDAC6-217ENST00000469223 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
HDAC6-217ENST00000469223 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
HDAC6-217ENST00000469223 HSBP1O75506 76 aa8.22□□□□□ -1.09
HDAC6-217ENST00000469223 ZNF56Q15929 161 aa8.22□□□□□ -1.09
HDAC6-217ENST00000469223 LINC01556Q5JQF7 62 aa8.22□□□□□ -1.09
HDAC6-217ENST00000469223 FAM74A4Q5TZK3 123 aa8.22□□□□□ -1.09
HDAC6-217ENST00000469223 FA2HQ7L5A8 372 aa8.22□□□□□ -1.09
HDAC6-217ENST00000469223 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
HDAC6-217ENST00000469223 HHLA3Q9XRX5 114 aa8.22□□□□□ -1.09
HDAC6-217ENST00000469223 G0S2P27469 103 aa8.21□□□□□ -1.1
HDAC6-217ENST00000469223 RASL10AQ92737 203 aa8.21□□□□□ -1.1
HDAC6-217ENST00000469223 RNF185Q96GF1 192 aa8.21□□□□□ -1.1
HDAC6-217ENST00000469223 K7EMI3 77 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 TCAPO15273 167 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 TNFRSF6BO95407 300 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 LINC00614P0C842 121 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 ESDP10768 282 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 FHL2Q14192 279 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 RNASEKQ6P5S7 137 aaKnown RBP8.2□□□□□ -1.1
HDAC6-217ENST00000469223 ZFP2Q6ZN57 461 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 PACRGQ96M98 296 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-217ENST00000469223 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 TM2D2Q9BX73 214 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
HDAC6-217ENST00000469223 MRPL16Q9NX20 251 aaKnown RBP8.2□□□□□ -1.1
HDAC6-217ENST00000469223 A0A087WWL8 130 aa8.19□□□□□ -1.1
HDAC6-217ENST00000469223 SERF1AO75920 110 aa8.19□□□□□ -1.1
HDAC6-217ENST00000469223 IGHV3-30P01768 117 aa8.19□□□□□ -1.1
HDAC6-217ENST00000469223 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms