RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 WDR73Q6P4I2 378 aa12.65□□□□□ -0.38
COL7A1-207ENST00000467985 Q0VG73 95 aa12.64□□□□□ -0.39
COL7A1-207ENST00000467985 FRZBQ92765 325 aa12.64□□□□□ -0.39
COL7A1-207ENST00000467985 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
COL7A1-207ENST00000467985 IGKV2D-24A0A075B6R9 120 aa12.63□□□□□ -0.39
COL7A1-207ENST00000467985 TMEM262E9PQX1 116 aa12.63□□□□□ -0.39
COL7A1-207ENST00000467985 UBE2WQ96B02 151 aa12.63□□□□□ -0.39
COL7A1-207ENST00000467985 IMMP2LQ96T52 175 aa12.63□□□□□ -0.39
COL7A1-207ENST00000467985 CNFNQ9BYD5 112 aa12.63□□□□□ -0.39
COL7A1-207ENST00000467985 TMEM242Q9NWH2 141 aa12.63□□□□□ -0.39
COL7A1-207ENST00000467985 VPS13BQ7Z7G8 4022 aa12.62□□□□□ -0.39
COL7A1-207ENST00000467985 WFDC2Q14508 124 aa12.62□□□□□ -0.39
COL7A1-207ENST00000467985 MRPL54Q6P161 138 aaKnown RBP12.62□□□□□ -0.39
COL7A1-207ENST00000467985 FAT1Q14517 4588 aa12.62□□□□□ -0.39
COL7A1-207ENST00000467985 H7C1H1 209 aa12.61□□□□□ -0.39
COL7A1-207ENST00000467985 LECT2O14960 151 aa12.61□□□□□ -0.39
COL7A1-207ENST00000467985 MGPP08493 103 aa12.61□□□□□ -0.39
COL7A1-207ENST00000467985 ATRAIDQ6UW56 229 aa12.61□□□□□ -0.39
COL7A1-207ENST00000467985 Q8N976 141 aa12.61□□□□□ -0.39
COL7A1-207ENST00000467985 BAALCQ8WXS3 180 aa12.61□□□□□ -0.39
COL7A1-207ENST00000467985 CHCHD5Q9BSY4 110 aa12.61□□□□□ -0.39
COL7A1-207ENST00000467985 A0A1B0GW15 77 aa12.6□□□□□ -0.39
COL7A1-207ENST00000467985 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
COL7A1-207ENST00000467985 S100A8P05109 93 aa12.6□□□□□ -0.39
COL7A1-207ENST00000467985 Q5VSD8 79 aa12.6□□□□□ -0.39
COL7A1-207ENST00000467985 BTF3L4Q96K17 158 aa12.6□□□□□ -0.39
COL7A1-207ENST00000467985 DNAJC30Q96LL9 226 aa12.6□□□□□ -0.39
COL7A1-207ENST00000467985 CAMPP49913 170 aa12.59□□□□□ -0.39
COL7A1-207ENST00000467985 HBBP68871 147 aa12.59□□□□□ -0.39
COL7A1-207ENST00000467985 DPH3P1Q9H4G8 78 aa12.59□□□□□ -0.39
COL7A1-207ENST00000467985 FAM229AH3BQW9 127 aa12.58□□□□□ -0.4
COL7A1-207ENST00000467985 CRPP02741 224 aa12.58□□□□□ -0.4
COL7A1-207ENST00000467985 S100A1P23297 94 aa12.58□□□□□ -0.4
COL7A1-207ENST00000467985 ATP5L2Q7Z4Y8 100 aa12.58□□□□□ -0.4
COL7A1-207ENST00000467985 C1orf43Q9BWL3 253 aa12.58□□□□□ -0.4
COL7A1-207ENST00000467985 TRAV9-1A0A075B6T8 112 aa12.57□□□□□ -0.4
COL7A1-207ENST00000467985 M0QY20 66 aa12.57□□□□□ -0.4
COL7A1-207ENST00000467985 MPV17L2Q567V2 206 aa12.57□□□□□ -0.4
COL7A1-207ENST00000467985 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.56□□□□□ -0.4
COL7A1-207ENST00000467985 TRBV25-1A0A075B6N4 114 aa12.56□□□□□ -0.4
COL7A1-207ENST00000467985 SMR3BP02814 79 aaPredicted RBP12.56□□□□□ -0.4
COL7A1-207ENST00000467985 ANGP03950 147 aaKnown RBP12.56□□□□□ -0.4
COL7A1-207ENST00000467985 INAFM2P0DMQ5 153 aa12.56□□□□□ -0.4
COL7A1-207ENST00000467985 SUMO4Q6EEV6 95 aa12.56□□□□□ -0.4
COL7A1-207ENST00000467985 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
COL7A1-207ENST00000467985 C14orf177Q52M58 125 aa12.55□□□□□ -0.4
COL7A1-207ENST00000467985 ENHOQ6UWT2 76 aa12.55□□□□□ -0.4
COL7A1-207ENST00000467985 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
COL7A1-207ENST00000467985 SMCO4Q9NRQ5 59 aa12.55□□□□□ -0.4
COL7A1-207ENST00000467985 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
COL7A1-207ENST00000467985 IGHV1-24A0A0C4DH33 117 aa12.54□□□□□ -0.4
COL7A1-207ENST00000467985 MIAQ16674 131 aa12.54□□□□□ -0.4
COL7A1-207ENST00000467985 IQCJQ1A5X6 159 aa12.54□□□□□ -0.4
COL7A1-207ENST00000467985 RASL11AQ6T310 242 aa12.54□□□□□ -0.4
COL7A1-207ENST00000467985 Q6ZSA8 131 aa12.54□□□□□ -0.4
COL7A1-207ENST00000467985 FAM30AQ9NZY2 134 aa12.54□□□□□ -0.4
COL7A1-207ENST00000467985 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
COL7A1-207ENST00000467985 A0A1B0GXF2 115 aa12.53□□□□□ -0.4
COL7A1-207ENST00000467985 HAMPP81172 84 aa12.53□□□□□ -0.4
COL7A1-207ENST00000467985 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
COL7A1-207ENST00000467985 RBX1P62877 108 aa12.52□□□□□ -0.41
COL7A1-207ENST00000467985 NIT2Q9NQR4 276 aa12.52□□□□□ -0.41
COL7A1-207ENST00000467985 GAGE6Q13070 117 aa12.51□□□□□ -0.41
COL7A1-207ENST00000467985 AMN1Q8IY45 258 aa12.51□□□□□ -0.41
COL7A1-207ENST00000467985 PRR34Q9NV39 138 aa12.51□□□□□ -0.41
COL7A1-207ENST00000467985 MYCBP2O75592 4640 aa12.51□□□□□ -0.41
COL7A1-207ENST00000467985 TGIF2-C20orf24A0A0A6YYL0 155 aa12.49□□□□□ -0.41
COL7A1-207ENST00000467985 COX19Q49B96 90 aa12.49□□□□□ -0.41
COL7A1-207ENST00000467985 LINC00269Q8N2A0 174 aa12.49□□□□□ -0.41
COL7A1-207ENST00000467985 TRAV26-2A0A0B4J265 109 aa12.48□□□□□ -0.41
COL7A1-207ENST00000467985 FAM104BQ5XKR9 115 aa12.48□□□□□ -0.41
COL7A1-207ENST00000467985 TMEM243Q9BU79 118 aa12.48□□□□□ -0.41
COL7A1-207ENST00000467985 HERC1Q15751 4861 aa12.48□□□□□ -0.41
COL7A1-207ENST00000467985 SCO1O75880 301 aa12.47□□□□□ -0.41
COL7A1-207ENST00000467985 HLA-DQA1P01909 254 aa12.47□□□□□ -0.41
COL7A1-207ENST00000467985 RAB4AP20338 218 aa12.47□□□□□ -0.41
COL7A1-207ENST00000467985 GATD1Q8NB37 220 aa12.47□□□□□ -0.41
COL7A1-207ENST00000467985 MRAP2Q96G30 205 aa12.47□□□□□ -0.41
COL7A1-207ENST00000467985 TRBV24-1A0A075B6N3 115 aa12.46□□□□□ -0.41
COL7A1-207ENST00000467985 A0A1B0GUV1 79 aa12.46□□□□□ -0.41
COL7A1-207ENST00000467985 COTL1Q14019 142 aa12.46□□□□□ -0.41
COL7A1-207ENST00000467985 LINC01620Q4KN68 170 aa12.46□□□□□ -0.41
COL7A1-207ENST00000467985 RNF185Q96GF1 192 aa12.46□□□□□ -0.41
COL7A1-207ENST00000467985 USP17L23D6RBM5 183 aa12.45□□□□□ -0.42
COL7A1-207ENST00000467985 MT-ND6P03923 174 aa12.45□□□□□ -0.42
COL7A1-207ENST00000467985 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
COL7A1-207ENST00000467985 CKS2P33552 79 aa12.45□□□□□ -0.42
COL7A1-207ENST00000467985 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
COL7A1-207ENST00000467985 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
COL7A1-207ENST00000467985 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
COL7A1-207ENST00000467985 GNB1LQ9BYB4 327 aa12.45□□□□□ -0.42
COL7A1-207ENST00000467985 TRAV8-4A0A0B4J246 113 aa12.44□□□□□ -0.42
COL7A1-207ENST00000467985 UBE2L6O14933 153 aa12.44□□□□□ -0.42
COL7A1-207ENST00000467985 NCR2O95944 276 aa12.44□□□□□ -0.42
COL7A1-207ENST00000467985 APCSP02743 223 aa12.44□□□□□ -0.42
COL7A1-207ENST00000467985 REG3AQ06141 175 aa12.44□□□□□ -0.42
COL7A1-207ENST00000467985 FLG2Q5D862 2391 aaPredicted RBP12.43□□□□□ -0.42
COL7A1-207ENST00000467985 SMKR1H3BMG3 65 aa12.43□□□□□ -0.42
COL7A1-207ENST00000467985 PPP1R17O96001 155 aa12.43□□□□□ -0.42
COL7A1-207ENST00000467985 AMTP48728 403 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms