RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 Q6ZTI0 123 aa9.77□□□□□ -0.85
HMGXB4-206ENST00000466438 TRGV2A0A075B6R0 118 aa9.76□□□□□ -0.85
HMGXB4-206ENST00000466438 M0R2P5 195 aa9.76□□□□□ -0.85
HMGXB4-206ENST00000466438 S100A6P06703 90 aa9.76□□□□□ -0.85
HMGXB4-206ENST00000466438 SLAQ13239 276 aa9.76□□□□□ -0.85
HMGXB4-206ENST00000466438 PTH2Q96A98 100 aa9.76□□□□□ -0.85
HMGXB4-206ENST00000466438 DPH3P1Q9H4G8 78 aa9.76□□□□□ -0.85
HMGXB4-206ENST00000466438 PHOX2AO14813 284 aa9.75□□□□□ -0.85
HMGXB4-206ENST00000466438 FAM104BQ5XKR9 115 aa9.75□□□□□ -0.85
HMGXB4-206ENST00000466438 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
HMGXB4-206ENST00000466438 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BKO60814 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 PPBPP02775 128 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 MRPL23Q16540 153 aaKnown RBP9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 ZNF876PQ49A33 203 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 NEGR1Q7Z3B1 354 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 AMN1Q8IY45 258 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 CHAC1Q9BUX1 264 aa9.74□□□□□ -0.85
HMGXB4-206ENST00000466438 SRIP30626 198 aa9.73□□□□□ -0.85
HMGXB4-206ENST00000466438 HNRNPA3P51991 378 aaKnown RBP9.73□□□□□ -0.85
HMGXB4-206ENST00000466438 ORMDL3Q8N138 153 aa9.73□□□□□ -0.85
HMGXB4-206ENST00000466438 A8MWV9 139 aa9.72□□□□□ -0.85
HMGXB4-206ENST00000466438 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
HMGXB4-206ENST00000466438 OR10J3Q5JRS4 329 aa9.72□□□□□ -0.85
HMGXB4-206ENST00000466438 MRAP2Q96G30 205 aa9.72□□□□□ -0.85
HMGXB4-206ENST00000466438 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
HMGXB4-206ENST00000466438 LAMTOR2Q9Y2Q5 125 aa9.72□□□□□ -0.85
HMGXB4-206ENST00000466438 GAS8-AS1O95177 125 aa9.71□□□□□ -0.86
HMGXB4-206ENST00000466438 MGPP08493 103 aa9.71□□□□□ -0.86
HMGXB4-206ENST00000466438 RAB4AP20338 218 aa9.71□□□□□ -0.86
HMGXB4-206ENST00000466438 CKS2P33552 79 aa9.71□□□□□ -0.86
HMGXB4-206ENST00000466438 MRPL51Q4U2R6 128 aaKnown RBP9.71□□□□□ -0.86
HMGXB4-206ENST00000466438 C14orf178Q8N769 122 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-206ENST00000466438 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.86
HMGXB4-206ENST00000466438 ALKBH7Q9BT30 221 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-206ENST00000466438 D6R8Y8 96 aa9.7□□□□□ -0.86
HMGXB4-206ENST00000466438 RHODO00212 210 aa9.7□□□□□ -0.86
HMGXB4-206ENST00000466438 PPP1R17O96001 155 aa9.7□□□□□ -0.86
HMGXB4-206ENST00000466438 CRYBA4P53673 196 aa9.7□□□□□ -0.86
HMGXB4-206ENST00000466438 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
HMGXB4-206ENST00000466438 RASL10AQ92737 203 aa9.7□□□□□ -0.86
HMGXB4-206ENST00000466438 RNF185Q96GF1 192 aa9.7□□□□□ -0.86
HMGXB4-206ENST00000466438 TRGV1A0A0A0MS02 117 aa9.69□□□□□ -0.86
HMGXB4-206ENST00000466438 NDUFA6P56556 154 aa9.69□□□□□ -0.86
HMGXB4-206ENST00000466438 Q0VG73 95 aa9.69□□□□□ -0.86
HMGXB4-206ENST00000466438 FAM74A4Q5TZK3 123 aa9.69□□□□□ -0.86
HMGXB4-206ENST00000466438 PRELID3AQ96N28 172 aa9.69□□□□□ -0.86
HMGXB4-206ENST00000466438 MRPL16Q9NX20 251 aaKnown RBP9.69□□□□□ -0.86
HMGXB4-206ENST00000466438 IBA57-AS1B1ANH7 110 aa9.68□□□□□ -0.86
HMGXB4-206ENST00000466438 WFDC2Q14508 124 aa9.68□□□□□ -0.86
HMGXB4-206ENST00000466438 ZNF56Q15929 161 aa9.68□□□□□ -0.86
HMGXB4-206ENST00000466438 LINC01620Q4KN68 170 aa9.68□□□□□ -0.86
HMGXB4-206ENST00000466438 BAGE3Q86Y29 109 aa9.68□□□□□ -0.86
HMGXB4-206ENST00000466438 Q9HAA7 133 aa9.68□□□□□ -0.86
HMGXB4-206ENST00000466438 HHLA3Q9XRX5 114 aa9.68□□□□□ -0.86
HMGXB4-206ENST00000466438 A0A087WWL8 130 aa9.67□□□□□ -0.86
HMGXB4-206ENST00000466438 F5H697 171 aa9.67□□□□□ -0.86
HMGXB4-206ENST00000466438 H7C1H1 209 aa9.67□□□□□ -0.86
HMGXB4-206ENST00000466438 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
HMGXB4-206ENST00000466438 CIDEAO60543 219 aa9.67□□□□□ -0.86
HMGXB4-206ENST00000466438 COA6Q5JTJ3 125 aaKnown RBP9.67□□□□□ -0.86
HMGXB4-206ENST00000466438 C18orf32Q8TCD1 76 aa9.67□□□□□ -0.86
HMGXB4-206ENST00000466438 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
HMGXB4-206ENST00000466438 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.66□□□□□ -0.86
HMGXB4-206ENST00000466438 TRAV4A0A0B4J268 109 aa9.66□□□□□ -0.86
HMGXB4-206ENST00000466438 NCR2O95944 276 aa9.66□□□□□ -0.86
HMGXB4-206ENST00000466438 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
HMGXB4-206ENST00000466438 ZFP2Q6ZN57 461 aa9.66□□□□□ -0.86
HMGXB4-206ENST00000466438 MAP1LC3AQ9H492 121 aa9.66□□□□□ -0.86
HMGXB4-206ENST00000466438 JPT2Q9H910 190 aa9.66□□□□□ -0.86
HMGXB4-206ENST00000466438 IGHV3-38A0A0C4DH36 116 aa9.65□□□□□ -0.86
HMGXB4-206ENST00000466438 K7EQD1 137 aa9.65□□□□□ -0.86
HMGXB4-206ENST00000466438 LINC01556Q5JQF7 62 aa9.65□□□□□ -0.86
HMGXB4-206ENST00000466438 CFAP126Q5VTH2 177 aa9.65□□□□□ -0.86
HMGXB4-206ENST00000466438 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.86
HMGXB4-206ENST00000466438 TRAV26-2A0A0B4J265 109 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 C5orf52A6NGY3 159 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 SMKR1H3BMG3 65 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 GYPEP15421 78 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 S100A2P29034 98 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 SNRPEP62304 92 aaKnown RBP9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 FHL2Q14192 279 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 Q6ZRU5 148 aa9.64□□□□□ -0.87
HMGXB4-206ENST00000466438 NPYP01303 97 aa9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 PMCHP20382 165 aa9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 IQCJQ1A5X6 159 aa9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 FA2HQ7L5A8 372 aa9.63□□□□□ -0.87
HMGXB4-206ENST00000466438 PRSS3P2Q8NHM4 247 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1018.9 ms