RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 A0A0J9YXV3 536 aa12.98□□□□□ -0.33
CPSF7-209ENST00000463244 CACNG7P62955 275 aa12.98□□□□□ -0.33
CPSF7-209ENST00000463244 NIT2Q9NQR4 276 aa12.98□□□□□ -0.33
CPSF7-209ENST00000463244 AMTP48728 403 aa12.97□□□□□ -0.33
CPSF7-209ENST00000463244 HIGD2BQ4VC39 106 aa12.97□□□□□ -0.33
CPSF7-209ENST00000463244 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
CPSF7-209ENST00000463244 STPG4Q8N801 248 aa12.97□□□□□ -0.33
CPSF7-209ENST00000463244 UMAD1C9J7I0 102 aa12.96□□□□□ -0.33
CPSF7-209ENST00000463244 RPS20P60866 119 aaKnown RBP12.96□□□□□ -0.33
CPSF7-209ENST00000463244 COTL1Q14019 142 aa12.96□□□□□ -0.33
CPSF7-209ENST00000463244 OR2D3Q8NGH3 330 aa12.96□□□□□ -0.33
CPSF7-209ENST00000463244 KRTAP10-8P60410 259 aa12.95□□□□□ -0.34
CPSF7-209ENST00000463244 LYPD6BQ8NI32 183 aa12.95□□□□□ -0.34
CPSF7-209ENST00000463244 GVQW2A0A096LPI5 108 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-209ENST00000463244 IGKV3OR2-268A0A0C4DH90 116 aa12.94□□□□□ -0.34
CPSF7-209ENST00000463244 TRGC1P0CF51 173 aa12.94□□□□□ -0.34
CPSF7-209ENST00000463244 C11orf52Q96A22 123 aa12.94□□□□□ -0.34
CPSF7-209ENST00000463244 A0A096LNI7 61 aa12.93□□□□□ -0.34
CPSF7-209ENST00000463244 C19orf71A6NCJ1 209 aa12.93□□□□□ -0.34
CPSF7-209ENST00000463244 F2Z2F3 143 aa12.93□□□□□ -0.34
CPSF7-209ENST00000463244 CENPWQ5EE01 88 aa12.93□□□□□ -0.34
CPSF7-209ENST00000463244 SPINK6Q6UWN8 80 aa12.93□□□□□ -0.34
CPSF7-209ENST00000463244 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-209ENST00000463244 LPAP08519 4548 aa12.93□□□□□ -0.34
CPSF7-209ENST00000463244 H2AFB1P0C5Y9 115 aa12.92□□□□□ -0.34
CPSF7-209ENST00000463244 REG3GQ6UW15 175 aa12.92□□□□□ -0.34
CPSF7-209ENST00000463244 NTF3P20783 257 aa12.91□□□□□ -0.34
CPSF7-209ENST00000463244 ZNF345Q14585 488 aa12.91□□□□□ -0.34
CPSF7-209ENST00000463244 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
CPSF7-209ENST00000463244 XKRY2A2RUG3 117 aa12.9□□□□□ -0.34
CPSF7-209ENST00000463244 LINC00474Q9P2X8 69 aa12.9□□□□□ -0.34
CPSF7-209ENST00000463244 SMLR1H3BR10 107 aa12.89□□□□□ -0.35
CPSF7-209ENST00000463244 MANBALQ9NQG1 85 aa12.89□□□□□ -0.35
CPSF7-209ENST00000463244 IFNA1P01562 189 aa12.88□□□□□ -0.35
CPSF7-209ENST00000463244 SRSF9Q13242 221 aaKnown RBP eCLIP12.88□□□□□ -0.35
CPSF7-209ENST00000463244 AMMECR1LQ6DCA0 310 aa12.88□□□□□ -0.35
CPSF7-209ENST00000463244 SMIM12Q96EX1 92 aa12.88□□□□□ -0.35
CPSF7-209ENST00000463244 CCL20P78556 96 aa12.87□□□□□ -0.35
CPSF7-209ENST00000463244 FOXI1Q12951 378 aa12.87□□□□□ -0.35
CPSF7-209ENST00000463244 Q6ZNX1 250 aa12.87□□□□□ -0.35
CPSF7-209ENST00000463244 C9orf62Q8N4C0 152 aa12.87□□□□□ -0.35
CPSF7-209ENST00000463244 GATD1Q8NB37 220 aa12.87□□□□□ -0.35
CPSF7-209ENST00000463244 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
CPSF7-209ENST00000463244 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
CPSF7-209ENST00000463244 CTRLP40313 264 aa12.86□□□□□ -0.35
CPSF7-209ENST00000463244 GNG4P50150 75 aa12.86□□□□□ -0.35
CPSF7-209ENST00000463244 RNASEKQ6P5S7 137 aaKnown RBP12.86□□□□□ -0.35
CPSF7-209ENST00000463244 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-209ENST00000463244 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
CPSF7-209ENST00000463244 IGKV2-29A2NJV5 120 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-209ENST00000463244 H7C423 109 aa12.85□□□□□ -0.35
CPSF7-209ENST00000463244 NCR2O95944 276 aa12.85□□□□□ -0.35
CPSF7-209ENST00000463244 Q6ZRP5 223 aa12.85□□□□□ -0.35
CPSF7-209ENST00000463244 CNFNQ9BYD5 112 aa12.85□□□□□ -0.35
CPSF7-209ENST00000463244 PKIGQ9Y2B9 76 aa12.85□□□□□ -0.35
CPSF7-209ENST00000463244 FGF6P10767 208 aa12.84□□□□□ -0.35
CPSF7-209ENST00000463244 TWIST1Q15672 202 aa12.84□□□□□ -0.35
CPSF7-209ENST00000463244 TRBV20OR9-2A0A075B6H5 130 aa12.83□□□□□ -0.36
CPSF7-209ENST00000463244 BCL2L11O43521 198 aa12.83□□□□□ -0.36
CPSF7-209ENST00000463244 GAS8-AS1O95177 125 aa12.83□□□□□ -0.36
CPSF7-209ENST00000463244 APCSP02743 223 aa12.83□□□□□ -0.36
CPSF7-209ENST00000463244 LINC00526Q96FQ7 95 aa12.83□□□□□ -0.36
CPSF7-209ENST00000463244 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
CPSF7-209ENST00000463244 KANTRA0A1W2PQU2 76 aa12.82□□□□□ -0.36
CPSF7-209ENST00000463244 XCL1P47992 114 aa12.82□□□□□ -0.36
CPSF7-209ENST00000463244 OR5A1Q8NGJ0 315 aa12.82□□□□□ -0.36
CPSF7-209ENST00000463244 RPL39LQ96EH5 51 aaKnown RBP12.82□□□□□ -0.36
CPSF7-209ENST00000463244 CARD19Q96LW7 228 aa12.82□□□□□ -0.36
CPSF7-209ENST00000463244 BIN3Q9NQY0 253 aa12.82□□□□□ -0.36
CPSF7-209ENST00000463244 HMSDA8MTL9 139 aa12.81□□□□□ -0.36
CPSF7-209ENST00000463244 ZNF25P17030 456 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-209ENST00000463244 IGHV1-58A0A0C4DH39 117 aa12.8□□□□□ -0.36
CPSF7-209ENST00000463244 NUDT10Q8NFP7 164 aa12.8□□□□□ -0.36
CPSF7-209ENST00000463244 NUDT11Q96G61 164 aa12.8□□□□□ -0.36
CPSF7-209ENST00000463244 SDHAF1A6NFY7 115 aa12.79□□□□□ -0.36
CPSF7-209ENST00000463244 CCL25O15444 150 aa12.79□□□□□ -0.36
CPSF7-209ENST00000463244 EIF5AP63241 154 aaKnown RBP12.79□□□□□ -0.36
CPSF7-209ENST00000463244 MEF2BQ02080 365 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-209ENST00000463244 LINC00959A0A1B0GUT2 108 aa12.78□□□□□ -0.36
CPSF7-209ENST00000463244 PDE6DO43924 150 aa12.78□□□□□ -0.36
CPSF7-209ENST00000463244 BTF3L4Q96K17 158 aa12.77□□□□□ -0.37
CPSF7-209ENST00000463244 BATF3Q9NR55 127 aa12.77□□□□□ -0.37
CPSF7-209ENST00000463244 MED9Q9NWA0 146 aa12.77□□□□□ -0.37
CPSF7-209ENST00000463244 FAM231BA6NCW3 169 aa12.76□□□□□ -0.37
CPSF7-209ENST00000463244 PTTG1IPP53801 180 aa12.76□□□□□ -0.37
CPSF7-209ENST00000463244 SYCNQ0VAF6 134 aa12.76□□□□□ -0.37
CPSF7-209ENST00000463244 TEX261Q6UWH6 196 aa12.76□□□□□ -0.37
CPSF7-209ENST00000463244 TMEM101Q96IK0 257 aa12.76□□□□□ -0.37
CPSF7-209ENST00000463244 RPP21Q9H633 154 aaKnown RBP12.76□□□□□ -0.37
CPSF7-209ENST00000463244 I3L3M4 83 aa12.75□□□□□ -0.37
CPSF7-209ENST00000463244 ZNF561-AS1K7EIQ3 104 aa12.75□□□□□ -0.37
CPSF7-209ENST00000463244 FOXA3P55318 350 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-209ENST00000463244 TEX46H3BTG2 121 aa12.74□□□□□ -0.37
CPSF7-209ENST00000463244 CD164L2Q6UWJ8 174 aa12.74□□□□□ -0.37
CPSF7-209ENST00000463244 SMIM15Q7Z3B0 74 aa12.74□□□□□ -0.37
CPSF7-209ENST00000463244 RNASE7Q9H1E1 156 aaKnown RBP12.74□□□□□ -0.37
CPSF7-209ENST00000463244 ESDP10768 282 aa12.73□□□□□ -0.37
CPSF7-209ENST00000463244 SS18Q15532 418 aa12.73□□□□□ -0.37
CPSF7-209ENST00000463244 RGS21Q2M5E4 152 aa12.73□□□□□ -0.37
CPSF7-209ENST00000463244 LOC107984640A0A0U1RRK4 108 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms