RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MORN3Q6PF18 240 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-213ENST00000462730 PTH2Q96A98 100 aa10.5□□□□□ -0.73
HDAC6-213ENST00000462730 K7EMI3 77 aa10.49□□□□□ -0.73
HDAC6-213ENST00000462730 GIG44P09565 113 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-213ENST00000462730 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
HDAC6-213ENST00000462730 IGHV3-73A0A0B4J1V6 119 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 TRBV6-5A0A0K0K1A5 114 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 A8MWV9 139 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 CRYBA4P53673 196 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 POLR2KP53803 58 aaKnown RBP10.48□□□□□ -0.73
HDAC6-213ENST00000462730 PIK3CD-AS1Q5SR53 167 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
HDAC6-213ENST00000462730 SDHAF1A6NFY7 115 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 K7ERJ3 54 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 CEND1Q8N111 149 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 C3orf56Q8N813 242 aa10.48□□□□□ -0.73
HDAC6-213ENST00000462730 E9PLD3 99 aa10.47□□□□□ -0.73
HDAC6-213ENST00000462730 VCYO14598 125 aa10.47□□□□□ -0.73
HDAC6-213ENST00000462730 PHLDA1Q8WV24 401 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-213ENST00000462730 TOMM6Q96B49 74 aa10.47□□□□□ -0.73
HDAC6-213ENST00000462730 A0A087WX48 190 aa10.46□□□□□ -0.73
HDAC6-213ENST00000462730 CFAP126Q5VTH2 177 aa10.46□□□□□ -0.73
HDAC6-213ENST00000462730 WFDC9Q8NEX5 89 aa10.46□□□□□ -0.73
HDAC6-213ENST00000462730 IL17DQ8TAD2 202 aa10.46□□□□□ -0.73
HDAC6-213ENST00000462730 DEFB104AQ8WTQ1 72 aa10.46□□□□□ -0.73
HDAC6-213ENST00000462730 SPATA25Q9BR10 227 aa10.46□□□□□ -0.73
HDAC6-213ENST00000462730 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.74
HDAC6-213ENST00000462730 PLNP26678 52 aa10.46□□□□□ -0.74
HDAC6-213ENST00000462730 KIR2DL4Q99706 377 aa10.46□□□□□ -0.74
HDAC6-213ENST00000462730 NHP2Q9NX24 153 aaKnown RBP10.46□□□□□ -0.74
HDAC6-213ENST00000462730 NOTCH3Q9UM47 2321 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 H7C1H1 209 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 CKS1BP61024 79 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 SCGB3A1Q96QR1 104 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 C1QTNF4Q9BXJ3 329 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-213ENST00000462730 RS1O15537 224 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 RPL24P83731 157 aaKnown RBP10.45□□□□□ -0.74
HDAC6-213ENST00000462730 ZFP2Q6ZN57 461 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 TMEM263Q8WUH6 116 aaKnown RBP10.45□□□□□ -0.74
HDAC6-213ENST00000462730 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
HDAC6-213ENST00000462730 RHODO00212 210 aa10.44□□□□□ -0.74
HDAC6-213ENST00000462730 P0DMU3 169 aa10.44□□□□□ -0.74
HDAC6-213ENST00000462730 FAM231AP0DMU4 169 aa10.44□□□□□ -0.74
HDAC6-213ENST00000462730 FAM231CP0DMU5 169 aa10.44□□□□□ -0.74
HDAC6-213ENST00000462730 SHISA2Q6UWI4 295 aa10.44□□□□□ -0.74
HDAC6-213ENST00000462730 TRGV1A0A0A0MS02 117 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 ATP6V0E2Q8NHE4 81 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 PGPEP1Q9NXJ5 209 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 TRAV12-1A0A0B4J245 112 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 Q6ZSN1 163 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 CSNK1G2-AS1Q8NCQ2 148 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 VCX2Q9H322 139 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-213ENST00000462730 CYSLTR1Q9Y271 337 aa10.43□□□□□ -0.74
HDAC6-213ENST00000462730 NACAE9PAV3 2078 aa10.42□□□□□ -0.74
HDAC6-213ENST00000462730 A0A1B0GWB2 263 aa10.42□□□□□ -0.74
HDAC6-213ENST00000462730 GAGE12HA6NDE8 117 aa10.42□□□□□ -0.74
HDAC6-213ENST00000462730 F8VRH5 84 aa10.42□□□□□ -0.74
HDAC6-213ENST00000462730 WIPF1O43516 503 aa10.42□□□□□ -0.74
HDAC6-213ENST00000462730 TSPAN13O95857 204 aa10.42□□□□□ -0.74
HDAC6-213ENST00000462730 TP53TG1Q9Y2A0 90 aa10.42□□□□□ -0.74
HDAC6-213ENST00000462730 IGLL5B9A064 214 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 OR11H2Q8NH07 326 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 C16orf74Q96GX8 76 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 STAB1Q9NY15 2570 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 I3L3M4 83 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 TSHBP01222 138 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 RHOHQ15669 191 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 LYRM7Q5U5X0 104 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 Q6ZTI0 123 aa10.41□□□□□ -0.74
HDAC6-213ENST00000462730 RPL39P62891 51 aaKnown RBP10.4□□□□□ -0.74
HDAC6-213ENST00000462730 HIST1H4GQ99525 98 aa10.4□□□□□ -0.74
HDAC6-213ENST00000462730 NOP10Q9NPE3 64 aaKnown RBP10.4□□□□□ -0.74
HDAC6-213ENST00000462730 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.74
HDAC6-213ENST00000462730 IGHV3-53P01767 116 aa10.39□□□□□ -0.75
HDAC6-213ENST00000462730 SMAGPQ0VAQ4 97 aa10.39□□□□□ -0.75
HDAC6-213ENST00000462730 RRN3P1Q2M238 152 aa10.39□□□□□ -0.75
HDAC6-213ENST00000462730 C12orf74Q32Q52 190 aa10.39□□□□□ -0.75
HDAC6-213ENST00000462730 BAALCQ8WXS3 180 aa10.39□□□□□ -0.75
HDAC6-213ENST00000462730 PLAC8L1A1L4L8 177 aa10.39□□□□□ -0.75
HDAC6-213ENST00000462730 LINC01549A6NIU2 74 aa10.39□□□□□ -0.75
HDAC6-213ENST00000462730 DAZ2Q13117 558 aaKnown RBP10.39□□□□□ -0.75
HDAC6-213ENST00000462730 NEXN-AS1Q8NBZ9 246 aa10.39□□□□□ -0.75
HDAC6-213ENST00000462730 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
HDAC6-213ENST00000462730 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
HDAC6-213ENST00000462730 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
HDAC6-213ENST00000462730 Q9UF83 564 aa10.38□□□□□ -0.75
HDAC6-213ENST00000462730 CMYA5Q8N3K9 4069 aa10.38□□□□□ -0.75
HDAC6-213ENST00000462730 MYMXA0A1B0GTQ4 84 aa10.37□□□□□ -0.75
HDAC6-213ENST00000462730 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
HDAC6-213ENST00000462730 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
HDAC6-213ENST00000462730 IGIPA6NJ69 53 aa10.37□□□□□ -0.75
HDAC6-213ENST00000462730 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
HDAC6-213ENST00000462730 DNAJC30Q96LL9 226 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms