RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 Q6ZTI0 123 aa14.53□□□□□ -0.08
CCM2-203ENST00000461377 ZNRF2Q8NHG8 242 aa14.53□□□□□ -0.08
CCM2-203ENST00000461377 C16orf74Q96GX8 76 aa14.53□□□□□ -0.08
CCM2-203ENST00000461377 NFE4Q86UQ8 179 aa14.53□□□□□ -0.08
CCM2-203ENST00000461377 CHCHD7Q9BUK0 85 aa14.53□□□□□ -0.08
CCM2-203ENST00000461377 PLAC8L1A1L4L8 177 aa14.52□□□□□ -0.09
CCM2-203ENST00000461377 CRLF1O75462 422 aa14.52□□□□□ -0.09
CCM2-203ENST00000461377 ZNF479Q96JC4 524 aa14.52□□□□□ -0.09
CCM2-203ENST00000461377 NIPBLQ6KC79 2804 aaeCLIP14.51□□□□□ -0.091e-6■■■■■ 35.4
CCM2-203ENST00000461377 TRAV4A0A0B4J268 109 aa14.51□□□□□ -0.09
CCM2-203ENST00000461377 HERVK_113P61574 105 aa14.51□□□□□ -0.09
CCM2-203ENST00000461377 NOP10Q9NPE3 64 aaKnown RBP14.51□□□□□ -0.09
CCM2-203ENST00000461377 FAM104AQ969W3 186 aa14.5□□□□□ -0.09
CCM2-203ENST00000461377 H3BRM9 83 aa14.49□□□□□ -0.09
CCM2-203ENST00000461377 GCSHP23434 173 aa14.49□□□□□ -0.09
CCM2-203ENST00000461377 TAL2Q16559 108 aa14.49□□□□□ -0.09
CCM2-203ENST00000461377 VCX2Q9H322 139 aa14.49□□□□□ -0.09
CCM2-203ENST00000461377 CRYBA4P53673 196 aa14.49□□□□□ -0.09
CCM2-203ENST00000461377 PHLDA1Q8WV24 401 aaPredicted RBP14.49□□□□□ -0.09
CCM2-203ENST00000461377 AMELXQ99217 191 aa14.49□□□□□ -0.09
CCM2-203ENST00000461377 TM2D2Q9BX73 214 aa14.49□□□□□ -0.09
CCM2-203ENST00000461377 NSD1Q96L73 2696 aaPredicted RBP14.48□□□□□ -0.09
CCM2-203ENST00000461377 IGHV3-38A0A0C4DH36 116 aa14.48□□□□□ -0.09
CCM2-203ENST00000461377 INSL3P51460 131 aa14.48□□□□□ -0.09
CCM2-203ENST00000461377 FXYD2P54710 66 aa14.48□□□□□ -0.09
CCM2-203ENST00000461377 COTL1Q14019 142 aa14.48□□□□□ -0.09
CCM2-203ENST00000461377 TMEM170BQ5T4T1 132 aa14.48□□□□□ -0.09
CCM2-203ENST00000461377 CEND1Q8N111 149 aa14.48□□□□□ -0.09
CCM2-203ENST00000461377 TRBV10-1A0A0K0K1A3 114 aa14.47□□□□□ -0.09
CCM2-203ENST00000461377 UBE2V1Q13404 147 aa14.47□□□□□ -0.09
CCM2-203ENST00000461377 RRN3P1Q2M238 152 aa14.47□□□□□ -0.09
CCM2-203ENST00000461377 OVOL2Q9BRP0 275 aa14.47□□□□□ -0.09
CCM2-203ENST00000461377 SPANXA1Q9NS26 97 aa14.47□□□□□ -0.09
CCM2-203ENST00000461377 K7EQD1 137 aa14.47□□□□□ -0.09
CCM2-203ENST00000461377 UBE2D4Q9Y2X8 147 aa14.47□□□□□ -0.09
CCM2-203ENST00000461377 FN1P02751 2386 aaKnown RBP14.47□□□□□ -0.09
CCM2-203ENST00000461377 ZNF815PA8K554 130 aa14.46□□□□□ -0.09
CCM2-203ENST00000461377 VAMP3Q15836 100 aa14.46□□□□□ -0.09
CCM2-203ENST00000461377 C9orf66Q5T8R8 295 aa14.46□□□□□ -0.09
CCM2-203ENST00000461377 SPATA3Q8NHX4 192 aa14.46□□□□□ -0.09
CCM2-203ENST00000461377 TRBV7-3A0A075B6L6 115 aa14.45□□□□□ -0.1
CCM2-203ENST00000461377 K7EP13 123 aa14.45□□□□□ -0.1
CCM2-203ENST00000461377 CEMP1Q6PRD7 247 aaPredicted RBP14.45□□□□□ -0.1
CCM2-203ENST00000461377 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.45□□□□□ -0.1
CCM2-203ENST00000461377 IGKV2-29A2NJV5 120 aaPredicted RBP14.45□□□□□ -0.1
CCM2-203ENST00000461377 CCL25O15444 150 aa14.45□□□□□ -0.1
CCM2-203ENST00000461377 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.45□□□□□ -0.1
CCM2-203ENST00000461377 A0A0J9YXV3 536 aa14.44□□□□□ -0.1
CCM2-203ENST00000461377 ZNF22P17026 224 aaPredicted RBP14.44□□□□□ -0.1
CCM2-203ENST00000461377 JMJD1CQ15652 2540 aa14.44□□□□□ -0.1
CCM2-203ENST00000461377 TMEM223A0PJW6 202 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 C9orf118A6NHY6 69 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 PTTG1IPP53801 180 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 RPL36AP83881 106 aaKnown RBP14.43□□□□□ -0.1
CCM2-203ENST00000461377 RPL36ALQ969Q0 106 aaKnown RBP14.43□□□□□ -0.1
CCM2-203ENST00000461377 CITED1Q99966 193 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 C2CD3Q4AC94 2353 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 GAGE12BA1L429 117 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 GAGE7O76087 117 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 GAGE12FP0CL80 117 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 GAGE12GP0CL81 117 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 GAGE12IP0CL82 117 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 TSPEAR-AS2P59090 65 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 SLC25A29Q8N8R3 303 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 HIST1H4GQ99525 98 aa14.43□□□□□ -0.1
CCM2-203ENST00000461377 PLEKHB2Q96CS7 222 aa14.42□□□□□ -0.1
CCM2-203ENST00000461377 HIVEP1P15822 2718 aa14.42□□□□□ -0.1
CCM2-203ENST00000461377 CIDEAO60543 219 aa14.42□□□□□ -0.1
CCM2-203ENST00000461377 SMIM13P0DJ93 91 aa14.42□□□□□ -0.1
CCM2-203ENST00000461377 TRGV2A0A075B6R0 118 aa14.41□□□□□ -0.1
CCM2-203ENST00000461377 UBE2D3P61077 147 aa14.41□□□□□ -0.1
CCM2-203ENST00000461377 UBE2D2P62837 147 aa14.41□□□□□ -0.1
CCM2-203ENST00000461377 MRPS36P82909 103 aaKnown RBP14.41□□□□□ -0.1
CCM2-203ENST00000461377 AMMECR1LQ6DCA0 310 aa14.41□□□□□ -0.1
CCM2-203ENST00000461377 DAZ4Q86SG3 579 aaKnown RBP14.4□□□□□ -0.1
CCM2-203ENST00000461377 DAZ3Q9NR90 486 aaKnown RBP14.4□□□□□ -0.1
CCM2-203ENST00000461377 J3QQQ9 107 aa14.4□□□□□ -0.1
CCM2-203ENST00000461377 LEPROTO15243 131 aa14.4□□□□□ -0.1
CCM2-203ENST00000461377 SCGB1D4Q6XE38 83 aa14.4□□□□□ -0.1
CCM2-203ENST00000461377 Q6ZUT4 128 aa14.4□□□□□ -0.1
CCM2-203ENST00000461377 TIMM21Q9BVV7 248 aa14.4□□□□□ -0.1
CCM2-203ENST00000461377 RNASE13Q5GAN3 156 aaKnown RBP14.39□□□□□ -0.11
CCM2-203ENST00000461377 RAB37Q96AX2 223 aa14.39□□□□□ -0.11
CCM2-203ENST00000461377 GAGE12JA6NER3 117 aa14.38□□□□□ -0.11
CCM2-203ENST00000461377 GAGE4Q13068 117 aa14.38□□□□□ -0.11
CCM2-203ENST00000461377 GAGE5Q13069 117 aa14.38□□□□□ -0.11
CCM2-203ENST00000461377 GAGE13Q4V321 117 aa14.38□□□□□ -0.11
CCM2-203ENST00000461377 H3BUT2 72 aa14.38□□□□□ -0.11
CCM2-203ENST00000461377 NHP2Q9NX24 153 aaKnown RBP14.38□□□□□ -0.11
CCM2-203ENST00000461377 TRBV6-4A0A1B0GX49 114 aa14.37□□□□□ -0.11
CCM2-203ENST00000461377 LGALS3P17931 250 aaKnown RBP14.37□□□□□ -0.11
CCM2-203ENST00000461377 NTM-AS1Q6ZSK4 140 aa14.37□□□□□ -0.11
CCM2-203ENST00000461377 A0A0J9YY99 117 aa14.36□□□□□ -0.11
CCM2-203ENST00000461377 TINCRA0A1B0GVN0 87 aa14.36□□□□□ -0.11
CCM2-203ENST00000461377 K7ERJ3 54 aa14.36□□□□□ -0.11
CCM2-203ENST00000461377 SBSPONQ8IVN8 264 aa14.35□□□□□ -0.11
CCM2-203ENST00000461377 OR5A1Q8NGJ0 315 aa14.35□□□□□ -0.11
CCM2-203ENST00000461377 NAA38Q9BRA0 125 aaKnown RBP14.35□□□□□ -0.11
CCM2-203ENST00000461377 X6R8D5 127 aa14.34□□□□□ -0.11
CCM2-203ENST00000461377 TRGV4A0A0C4DH28 118 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms