RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 DCANP1Q8TF63 244 aa13.15□□□□□ -0.3
CHRD-208ENST00000460627 SPATA25Q9BR10 227 aa13.15□□□□□ -0.3
CHRD-208ENST00000460627 CXCL5P42830 114 aa13.15□□□□□ -0.3
CHRD-208ENST00000460627 KLLNB2CW77 178 aa13.15□□□□□ -0.3
CHRD-208ENST00000460627 C11orf86A6NJI1 115 aa13.14□□□□□ -0.31
CHRD-208ENST00000460627 SPATA12Q7Z6I5 190 aa13.14□□□□□ -0.31
CHRD-208ENST00000460627 LINC00482Q8N8I6 264 aa13.14□□□□□ -0.31
CHRD-208ENST00000460627 TRAV26-1A0A087WT03 109 aa13.14□□□□□ -0.31
CHRD-208ENST00000460627 C21orf62-AS1Q17RA5 79 aa13.13□□□□□ -0.31
CHRD-208ENST00000460627 SMR3AQ99954 134 aa13.13□□□□□ -0.31
CHRD-208ENST00000460627 RAI1Q7Z5J4 1906 aaPredicted RBP13.13□□□□□ -0.31
CHRD-208ENST00000460627 A0A1B0GV72 72 aa13.13□□□□□ -0.31
CHRD-208ENST00000460627 CFC1BP0CG36 223 aa13.13□□□□□ -0.31
CHRD-208ENST00000460627 CFC1P0CG37 223 aa13.13□□□□□ -0.31
CHRD-208ENST00000460627 LURAP1LQ8IV03 231 aa13.13□□□□□ -0.31
CHRD-208ENST00000460627 SIGMAR1Q99720 223 aa13.13□□□□□ -0.31
CHRD-208ENST00000460627 NDUFA1O15239 70 aa13.13□□□□□ -0.31
CHRD-208ENST00000460627 IGLL5B9A064 214 aa13.12□□□□□ -0.31
CHRD-208ENST00000460627 POLQO75417 2590 aa13.12□□□□□ -0.31
CHRD-208ENST00000460627 KIR2DL5BQ8NHK3 375 aa13.12□□□□□ -0.31
CHRD-208ENST00000460627 TMEM126AQ9H061 195 aa13.12□□□□□ -0.31
CHRD-208ENST00000460627 P0DMU3 169 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 FAM231AP0DMU4 169 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 FAM231CP0DMU5 169 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 A0A1W2PPM0 123 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 SOCS3O14543 225 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 TDRG1Q3Y452 100 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 HIGD1BQ9P298 99 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 UBE2BP63146 152 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 CDPF1Q6NVV7 123 aa13.11□□□□□ -0.31
CHRD-208ENST00000460627 TRBV6-4A0A1B0GX49 114 aa13.1□□□□□ -0.31
CHRD-208ENST00000460627 CCL25O15444 150 aa13.1□□□□□ -0.31
CHRD-208ENST00000460627 SPAG11BQ08648 103 aa13.1□□□□□ -0.31
CHRD-208ENST00000460627 SND1-IT1Q9HBX3 110 aa13.1□□□□□ -0.31
CHRD-208ENST00000460627 CFAP126Q5VTH2 177 aa13.1□□□□□ -0.31
CHRD-208ENST00000460627 HIST2H2BDQ6DRA6 164 aa13.1□□□□□ -0.31
CHRD-208ENST00000460627 K7ERJ3 54 aa13.09□□□□□ -0.31
CHRD-208ENST00000460627 Q6ZUT4 128 aa13.09□□□□□ -0.31
CHRD-208ENST00000460627 GTSF1LQ9H1H1 148 aa13.09□□□□□ -0.31
CHRD-208ENST00000460627 IGHV1-58A0A0C4DH39 117 aa13.09□□□□□ -0.31
CHRD-208ENST00000460627 K7EP34 96 aa13.09□□□□□ -0.31
CHRD-208ENST00000460627 CDK2AP2O75956 126 aa13.09□□□□□ -0.31
CHRD-208ENST00000460627 M0QY20 66 aa13.09□□□□□ -0.31
CHRD-208ENST00000460627 RS1O15537 224 aa13.09□□□□□ -0.31
CHRD-208ENST00000460627 GAGE2BQ13066 116 aa13.08□□□□□ -0.31
CHRD-208ENST00000460627 GAGE2EQ4V326 116 aa13.08□□□□□ -0.31
CHRD-208ENST00000460627 GAGE2DQ9UEU5 116 aa13.08□□□□□ -0.31
CHRD-208ENST00000460627 F8W1H4 67 aa13.08□□□□□ -0.32
CHRD-208ENST00000460627 MRPS12O15235 138 aaKnown RBP13.08□□□□□ -0.32
CHRD-208ENST00000460627 DEFB131BA0A096LNP1 70 aa13.08□□□□□ -0.32
CHRD-208ENST00000460627 CRYBA4P53673 196 aa13.08□□□□□ -0.32
CHRD-208ENST00000460627 GAGE2AQ6NT46 116 aa13.08□□□□□ -0.32
CHRD-208ENST00000460627 H7C423 109 aa13.08□□□□□ -0.32
CHRD-208ENST00000460627 PCP4P48539 62 aa13.08□□□□□ -0.32
CHRD-208ENST00000460627 RNASE3P12724 160 aaKnown RBP13.07□□□□□ -0.32
CHRD-208ENST00000460627 NEXN-AS1Q8NBZ9 246 aa13.07□□□□□ -0.32
CHRD-208ENST00000460627 C16orf95Q9H693 158 aa13.07□□□□□ -0.32
CHRD-208ENST00000460627 TNRC6BQ9UPQ9 1833 aaKnown RBP13.07□□□□□ -0.32
CHRD-208ENST00000460627 TRBV6-5A0A0K0K1A5 114 aa13.07□□□□□ -0.32
CHRD-208ENST00000460627 RPL18AQ02543 176 aaKnown RBP13.07□□□□□ -0.32
CHRD-208ENST00000460627 OPRPNQ99935 248 aaPredicted RBP13.07□□□□□ -0.32
CHRD-208ENST00000460627 A4D1N5 150 aa13.06□□□□□ -0.32
CHRD-208ENST00000460627 PRR9Q5T870 116 aa13.06□□□□□ -0.32
CHRD-208ENST00000460627 RPL32P62910 135 aaKnown RBP13.06□□□□□ -0.32
CHRD-208ENST00000460627 MUSTN1Q8IVN3 82 aa13.06□□□□□ -0.32
CHRD-208ENST00000460627 PPDPFLQ8WWR9 84 aa13.06□□□□□ -0.32
CHRD-208ENST00000460627 CEMP1Q6PRD7 247 aaPredicted RBP13.05□□□□□ -0.32
CHRD-208ENST00000460627 C11orf21Q9P2W6 132 aa13.05□□□□□ -0.32
CHRD-208ENST00000460627 ETDBQ3ZM63 59 aa13.05□□□□□ -0.32
CHRD-208ENST00000460627 OCIAD2Q56VL3 154 aa13.05□□□□□ -0.32
CHRD-208ENST00000460627 RNF185Q96GF1 192 aa13.05□□□□□ -0.32
CHRD-208ENST00000460627 TTTY13Q9BZ97 58 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 U3KQK5 164 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 PIK3CD-AS1Q5SR53 167 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 TINCRA0A1B0GVN0 87 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 WFDC10AQ9H1F0 79 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 IGHV4-4A0A075B6R2 117 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 TRBV27A0A0K0K1C4 114 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 ODF3L2Q3SX64 289 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 CARD19Q96LW7 228 aa13.04□□□□□ -0.32
CHRD-208ENST00000460627 H0YGX0 51 aa13.03□□□□□ -0.32
CHRD-208ENST00000460627 C9orf85Q96MD7 179 aa13.03□□□□□ -0.32
CHRD-208ENST00000460627 DSCAML1Q8TD84 2053 aa13.03□□□□□ -0.32
CHRD-208ENST00000460627 IGLV1-51P01701 117 aa13.03□□□□□ -0.32
CHRD-208ENST00000460627 YPEL4Q96NS1 127 aa13.03□□□□□ -0.32
CHRD-208ENST00000460627 LINC00467Q9BRT7 94 aa13.03□□□□□ -0.32
CHRD-208ENST00000460627 ACANP16112 2415 aa13.03□□□□□ -0.32
CHRD-208ENST00000460627 HIST1H4AP62805 103 aaKnown RBP13.02□□□□□ -0.32
CHRD-208ENST00000460627 IGHV4-28A0A0C4DH34 117 aa13.02□□□□□ -0.33
CHRD-208ENST00000460627 ETDCA0A1B0GVM5 59 aa13.02□□□□□ -0.33
CHRD-208ENST00000460627 H3BMG7 143 aa13.02□□□□□ -0.33
CHRD-208ENST00000460627 FAM110AQ9BQ89 295 aa13.02□□□□□ -0.33
CHRD-208ENST00000460627 PTPRBP23467 1997 aa13.01□□□□□ -0.33
CHRD-208ENST00000460627 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
CHRD-208ENST00000460627 REG3AQ06141 175 aa13.01□□□□□ -0.33
CHRD-208ENST00000460627 CNFNQ9BYD5 112 aa13.01□□□□□ -0.33
CHRD-208ENST00000460627 GAGE12HA6NDE8 117 aa13□□□□□ -0.33
CHRD-208ENST00000460627 LINC00269Q8N2A0 174 aa13□□□□□ -0.33
CHRD-208ENST00000460627 K7EP13 123 aa13□□□□□ -0.33
CHRD-208ENST00000460627 TIRAPP58753 221 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms