RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TENM4Q6N022 2769 aa13.24□□□□□ -0.29
HPS3-202ENST00000460120 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.24□□□□□ -0.29
HPS3-202ENST00000460120 IGKV2-29A2NJV5 120 aaPredicted RBP13.24□□□□□ -0.29
HPS3-202ENST00000460120 RHOHQ15669 191 aa13.24□□□□□ -0.29
HPS3-202ENST00000460120 Q6ZSV7 163 aa13.24□□□□□ -0.29
HPS3-202ENST00000460120 SPXQ9BT56 116 aa13.24□□□□□ -0.29
HPS3-202ENST00000460120 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
HPS3-202ENST00000460120 KRTAP1-3Q8IUG1 177 aa13.23□□□□□ -0.29
HPS3-202ENST00000460120 TRAV26-1A0A087WT03 109 aa13.23□□□□□ -0.29
HPS3-202ENST00000460120 A0A1B0GV72 72 aa13.23□□□□□ -0.29
HPS3-202ENST00000460120 DEFB114Q30KQ6 69 aa13.23□□□□□ -0.29
HPS3-202ENST00000460120 RAX2Q96IS3 184 aa13.23□□□□□ -0.29
HPS3-202ENST00000460120 ETDBQ3ZM63 59 aa13.22□□□□□ -0.29
HPS3-202ENST00000460120 M0R2P5 195 aa13.22□□□□□ -0.29
HPS3-202ENST00000460120 DNAJC9-AS1A6NH13 148 aa13.21□□□□□ -0.29
HPS3-202ENST00000460120 H7C2G1 150 aa13.21□□□□□ -0.29
HPS3-202ENST00000460120 CRYBA4P53673 196 aa13.21□□□□□ -0.29
HPS3-202ENST00000460120 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.29
HPS3-202ENST00000460120 ZNF415Q09FC8 603 aa13.21□□□□□ -0.29
HPS3-202ENST00000460120 TRAV2A0A0B4J234 112 aa13.2□□□□□ -0.3
HPS3-202ENST00000460120 TSPAN13O95857 204 aa13.2□□□□□ -0.3
HPS3-202ENST00000460120 PSMB2P49721 201 aa13.2□□□□□ -0.3
HPS3-202ENST00000460120 CFAP126Q5VTH2 177 aa13.2□□□□□ -0.3
HPS3-202ENST00000460120 Q8N2B8 174 aa13.2□□□□□ -0.3
HPS3-202ENST00000460120 TRAV8-3A0A0A6YYJ7 113 aa13.2□□□□□ -0.3
HPS3-202ENST00000460120 IGHV3-53P01767 116 aa13.2□□□□□ -0.3
HPS3-202ENST00000460120 A8MZ25 164 aa13.19□□□□□ -0.3
HPS3-202ENST00000460120 RHODO00212 210 aa13.19□□□□□ -0.3
HPS3-202ENST00000460120 ESM1Q9NQ30 184 aa13.19□□□□□ -0.3
HPS3-202ENST00000460120 TMEM223A0PJW6 202 aa13.19□□□□□ -0.3
HPS3-202ENST00000460120 GAGE13Q4V321 117 aa13.19□□□□□ -0.3
HPS3-202ENST00000460120 A0A1B0GWB2 263 aa13.19□□□□□ -0.3
HPS3-202ENST00000460120 AMELXQ99217 191 aa13.19□□□□□ -0.3
HPS3-202ENST00000460120 ZNF418Q8TF45 676 aaPredicted RBP13.18□□□□□ -0.3
HPS3-202ENST00000460120 INSP01308 110 aa13.18□□□□□ -0.3
HPS3-202ENST00000460120 IGHV3-30P01768 117 aa13.18□□□□□ -0.3
HPS3-202ENST00000460120 IGHV3-30-5P0DP03 117 aa13.18□□□□□ -0.3
HPS3-202ENST00000460120 ODF3L2Q3SX64 289 aa13.18□□□□□ -0.3
HPS3-202ENST00000460120 C2CD3Q4AC94 2353 aa13.17□□□□□ -0.3
HPS3-202ENST00000460120 A8MWV9 139 aa13.17□□□□□ -0.3
HPS3-202ENST00000460120 NFE4Q86UQ8 179 aa13.17□□□□□ -0.3
HPS3-202ENST00000460120 STHQ8IWL8 128 aa13.17□□□□□ -0.3
HPS3-202ENST00000460120 UBE2D1P51668 147 aa13.17□□□□□ -0.3
HPS3-202ENST00000460120 NPC2P61916 151 aa13.17□□□□□ -0.3
HPS3-202ENST00000460120 NDUFA11Q86Y39 141 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 SLC25A29Q8N8R3 303 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 C11orf72Q8NBR9 251 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 LINC00467Q9BRT7 94 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 TRGV1A0A0A0MS02 117 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 CFC1BP0CG36 223 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 CFC1P0CG37 223 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 INSL3P51460 131 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 FAM104AQ969W3 186 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 CITED2Q99967 270 aaPredicted RBP13.16□□□□□ -0.3
HPS3-202ENST00000460120 WFDC10AQ9H1F0 79 aa13.16□□□□□ -0.3
HPS3-202ENST00000460120 LEPROTO15243 131 aa13.15□□□□□ -0.3
HPS3-202ENST00000460120 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.3
HPS3-202ENST00000460120 LRRC75A-AS1Q8N1F1 130 aa13.15□□□□□ -0.3
HPS3-202ENST00000460120 SIGMAR1Q99720 223 aa13.15□□□□□ -0.3
HPS3-202ENST00000460120 SETXQ7Z333 2677 aaKnown RBP13.14□□□□□ -0.31
HPS3-202ENST00000460120 F8W1H4 67 aa13.14□□□□□ -0.31
HPS3-202ENST00000460120 CCL24O00175 119 aa13.14□□□□□ -0.31
HPS3-202ENST00000460120 SPINK8P0C7L1 97 aa13.14□□□□□ -0.31
HPS3-202ENST00000460120 CKS1BP61024 79 aa13.14□□□□□ -0.31
HPS3-202ENST00000460120 Q6ZUT4 128 aa13.14□□□□□ -0.31
HPS3-202ENST00000460120 A4D1N5 150 aa13.14□□□□□ -0.31
HPS3-202ENST00000460120 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
HPS3-202ENST00000460120 CHCHD7Q9BUK0 85 aa13.13□□□□□ -0.31
HPS3-202ENST00000460120 TIMM21Q9BVV7 248 aa13.13□□□□□ -0.31
HPS3-202ENST00000460120 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
HPS3-202ENST00000460120 SCGB1A1P11684 91 aa13.13□□□□□ -0.31
HPS3-202ENST00000460120 MUSTN1Q8IVN3 82 aa13.13□□□□□ -0.31
HPS3-202ENST00000460120 SCGB1C2P0DMR2 95 aa13.12□□□□□ -0.31
HPS3-202ENST00000460120 PRSS2P07478 247 aa13.12□□□□□ -0.31
HPS3-202ENST00000460120 PTH2Q96A98 100 aa13.12□□□□□ -0.31
HPS3-202ENST00000460120 YAE1D1Q9NRH1 226 aa13.12□□□□□ -0.31
HPS3-202ENST00000460120 ITPR2Q14571 2701 aa13.11□□□□□ -0.31
HPS3-202ENST00000460120 A8MTW9 85 aa13.11□□□□□ -0.31
HPS3-202ENST00000460120 C1orf158Q8N1D5 194 aa13.11□□□□□ -0.31
HPS3-202ENST00000460120 PRO0461Q9UI25 63 aa13.11□□□□□ -0.31
HPS3-202ENST00000460120 UBE2D4Q9Y2X8 147 aa13.11□□□□□ -0.31
HPS3-202ENST00000460120 TSSC4Q9Y5U2 329 aaPredicted RBP13.11□□□□□ -0.31
HPS3-202ENST00000460120 RPL35AP18077 110 aaKnown RBP13.1□□□□□ -0.31
HPS3-202ENST00000460120 Q6ZTI0 123 aa13.1□□□□□ -0.31
HPS3-202ENST00000460120 EIF4EBP3O60516 100 aaPredicted RBP13.09□□□□□ -0.31
HPS3-202ENST00000460120 A0A0J9YXY3 114 aa13.09□□□□□ -0.31
HPS3-202ENST00000460120 NDUFA7O95182 113 aa13.09□□□□□ -0.31
HPS3-202ENST00000460120 TCL1BO95988 128 aa13.09□□□□□ -0.31
HPS3-202ENST00000460120 DGAT2L7PQ6IED9 249 aa13.09□□□□□ -0.31
HPS3-202ENST00000460120 Q1RN00 199 aa13.08□□□□□ -0.32
HPS3-202ENST00000460120 PRO1854Q9UHT4 67 aa13.08□□□□□ -0.32
HPS3-202ENST00000460120 PLA2G2AP14555 144 aa13.08□□□□□ -0.32
HPS3-202ENST00000460120 SMCPP49901 116 aaPredicted RBP13.08□□□□□ -0.32
HPS3-202ENST00000460120 GEMIN7Q9H840 131 aaKnown RBP13.07□□□□□ -0.32
HPS3-202ENST00000460120 DAND5Q8N907 189 aa13.07□□□□□ -0.32
HPS3-202ENST00000460120 PYGO1Q9Y3Y4 419 aa13.07□□□□□ -0.32
HPS3-202ENST00000460120 MRPS36P82909 103 aaKnown RBP13.06□□□□□ -0.32
HPS3-202ENST00000460120 NOP10Q9NPE3 64 aaKnown RBP13.06□□□□□ -0.32
HPS3-202ENST00000460120 A0A0U1RRA0 63 aa13.06□□□□□ -0.32
HPS3-202ENST00000460120 RS1O15537 224 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms