RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 RAB5CP51148 216 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 COTL1Q14019 142 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 ZNF345Q14585 488 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 KCNRGQ8N5I3 272 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 PRSS3P2Q8NHM4 247 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 SMIM12Q96EX1 92 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 TPPP3Q9BW30 176 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 A0A1B0GV50 99 aa6.52□□□□□ -1.37
HDLBP-227ENST00000458564 C19orf71A6NCJ1 209 aa6.52□□□□□ -1.37
HDLBP-227ENST00000458564 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
HDLBP-227ENST00000458564 AMTP48728 403 aa6.52□□□□□ -1.37
HDLBP-227ENST00000458564 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
HDLBP-227ENST00000458564 MAJINQ3KP22 176 aa6.52□□□□□ -1.37
HDLBP-227ENST00000458564 OR2D3Q8NGH3 330 aa6.52□□□□□ -1.37
HDLBP-227ENST00000458564 GTSF1Q8WW33 167 aa6.52□□□□□ -1.37
HDLBP-227ENST00000458564 IGKV2-24A0A0C4DH68 120 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 XKRY2A2RUG3 117 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 HIGD2BQ4VC39 106 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 CENPWQ5EE01 88 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 SPINK6Q6UWN8 80 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 STPG4Q8N801 248 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 MANBALQ9NQG1 85 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 LINC00474Q9P2X8 69 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 PKIGQ9Y2B9 76 aa6.51□□□□□ -1.37
HDLBP-227ENST00000458564 A0A096LNI7 61 aa6.5□□□□□ -1.37
HDLBP-227ENST00000458564 CTRLP40313 264 aa6.5□□□□□ -1.37
HDLBP-227ENST00000458564 ODF1Q14990 250 aa6.5□□□□□ -1.37
HDLBP-227ENST00000458564 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
HDLBP-227ENST00000458564 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
HDLBP-227ENST00000458564 CNFNQ9BYD5 112 aa6.5□□□□□ -1.37
HDLBP-227ENST00000458564 H7C423 109 aa6.49□□□□□ -1.37
HDLBP-227ENST00000458564 NCR2O95944 276 aa6.49□□□□□ -1.37
HDLBP-227ENST00000458564 NTF3P20783 257 aa6.49□□□□□ -1.37
HDLBP-227ENST00000458564 CCL20P78556 96 aa6.49□□□□□ -1.37
HDLBP-227ENST00000458564 LYZL1Q6UWQ5 148 aa6.49□□□□□ -1.37
HDLBP-227ENST00000458564 C9orf62Q8N4C0 152 aa6.49□□□□□ -1.37
HDLBP-227ENST00000458564 TRAV1-1A0A0B4J248 108 aa6.48□□□□□ -1.37
HDLBP-227ENST00000458564 IGKV3OR2-268A0A0C4DH90 116 aa6.48□□□□□ -1.37
HDLBP-227ENST00000458564 IFNA1P01562 189 aa6.48□□□□□ -1.37
HDLBP-227ENST00000458564 GNG4P50150 75 aa6.48□□□□□ -1.37
HDLBP-227ENST00000458564 FOXI1Q12951 378 aa6.48□□□□□ -1.37
HDLBP-227ENST00000458564 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.373e-10■■■■■ 32.5
HDLBP-227ENST00000458564 GATD1Q8NB37 220 aa6.48□□□□□ -1.37
HDLBP-227ENST00000458564 GNG13Q9P2W3 67 aa6.48□□□□□ -1.37
HDLBP-227ENST00000458564 TRBV20OR9-2A0A075B6H5 130 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 HMSDA8MTL9 139 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 SMLR1H3BR10 107 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 BCL2L11O43521 198 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 ZNF25P17030 456 aaPredicted RBP6.47□□□□□ -1.37
HDLBP-227ENST00000458564 AMMECR1LQ6DCA0 310 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 Q6ZNX1 250 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 Q6ZRP5 223 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 BIN3Q9NQY0 253 aa6.47□□□□□ -1.37
HDLBP-227ENST00000458564 KANTRA0A1W2PQU2 76 aa6.46□□□□□ -1.38
HDLBP-227ENST00000458564 PDE6DO43924 150 aa6.46□□□□□ -1.38
HDLBP-227ENST00000458564 APCSP02743 223 aa6.46□□□□□ -1.38
HDLBP-227ENST00000458564 FGF6P10767 208 aa6.46□□□□□ -1.38
HDLBP-227ENST00000458564 EIF5AP63241 154 aaKnown RBP6.46□□□□□ -1.38
HDLBP-227ENST00000458564 OR5A1Q8NGJ0 315 aa6.46□□□□□ -1.38
HDLBP-227ENST00000458564 BATF3Q9NR55 127 aa6.46□□□□□ -1.38
HDLBP-227ENST00000458564 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.45□□□□□ -1.38
HDLBP-227ENST00000458564 TRAV26-2A0A0B4J265 109 aa6.45□□□□□ -1.38
HDLBP-227ENST00000458564 IGHV1-58A0A0C4DH39 117 aa6.45□□□□□ -1.38
HDLBP-227ENST00000458564 IGKV2-29A2NJV5 120 aaPredicted RBP6.45□□□□□ -1.38
HDLBP-227ENST00000458564 RAB19A4D1S5 217 aa6.45□□□□□ -1.38
HDLBP-227ENST00000458564 MEF2BQ02080 365 aaPredicted RBP6.45□□□□□ -1.38
HDLBP-227ENST00000458564 TWIST1Q15672 202 aa6.45□□□□□ -1.38
HDLBP-227ENST00000458564 RNASEKQ6P5S7 137 aaKnown RBP6.45□□□□□ -1.38
HDLBP-227ENST00000458564 CARD19Q96LW7 228 aa6.45□□□□□ -1.38
HDLBP-227ENST00000458564 LPAP08519 4548 aa6.44□□□□□ -1.38
HDLBP-227ENST00000458564 SDHAF1A6NFY7 115 aa6.44□□□□□ -1.38
HDLBP-227ENST00000458564 XCL1P47992 114 aa6.44□□□□□ -1.38
HDLBP-227ENST00000458564 TEX261Q6UWH6 196 aa6.44□□□□□ -1.38
HDLBP-227ENST00000458564 NUDT10Q8NFP7 164 aa6.44□□□□□ -1.38
HDLBP-227ENST00000458564 RPL39LQ96EH5 51 aaKnown RBP6.44□□□□□ -1.38
HDLBP-227ENST00000458564 NUDT11Q96G61 164 aa6.44□□□□□ -1.38
HDLBP-227ENST00000458564 FAM210AQ96ND0 272 aa6.44□□□□□ -1.38
HDLBP-227ENST00000458564 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
HDLBP-227ENST00000458564 FAM231BA6NCW3 169 aa6.43□□□□□ -1.38
HDLBP-227ENST00000458564 TEX46H3BTG2 121 aa6.43□□□□□ -1.38
HDLBP-227ENST00000458564 CCL25O15444 150 aa6.43□□□□□ -1.38
HDLBP-227ENST00000458564 GAS8-AS1O95177 125 aa6.43□□□□□ -1.38
HDLBP-227ENST00000458564 PTTG1IPP53801 180 aa6.43□□□□□ -1.38
HDLBP-227ENST00000458564 RGS21Q2M5E4 152 aa6.43□□□□□ -1.38
HDLBP-227ENST00000458564 RPP21Q9H633 154 aaKnown RBP6.43□□□□□ -1.38
HDLBP-227ENST00000458564 TRBV6-5A0A0K0K1A5 114 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 I3L3M4 83 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 BCL2P10415 239 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 ESDP10768 282 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 CD164L2Q6UWJ8 174 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 SMIM15Q7Z3B0 74 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 MRPL52Q86TS9 123 aaKnown RBP6.42□□□□□ -1.38
HDLBP-227ENST00000458564 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 TMEM101Q96IK0 257 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 BTF3L4Q96K17 158 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 MED9Q9NWA0 146 aa6.42□□□□□ -1.38
HDLBP-227ENST00000458564 ZNF561-AS1K7EIQ3 104 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms