RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TMEM263Q8WUH6 116 aaKnown RBP1.33□□□□□ -2.2
LINC02540-201ENST00000455554 SPTSSAQ969W0 71 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 FAM104AQ969W3 186 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 BPESC1Q9GZL8 116 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 RPP21Q9H633 154 aaKnown RBP1.33□□□□□ -2.2
LINC02540-201ENST00000455554 TMEM167BQ9NRX6 74 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 MRPL35Q9NZE8 188 aaKnown RBP1.33□□□□□ -2.2
LINC02540-201ENST00000455554 UBE2D4Q9Y2X8 147 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 DIDO1Q9BTC0 2240 aaKnown RBP1.33□□□□□ -2.2
LINC02540-201ENST00000455554 SSC5DA1L4H1 1573 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 NACAE9PAV3 2078 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 ZGRF1Q86YA3 2104 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 FREM1Q5H8C1 2179 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 INTS1Q8N201 2190 aaKnown RBP1.32□□□□□ -2.2
LINC02540-201ENST00000455554 THSD7AQ9UPZ6 1657 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 TNS1Q9HBL0 1735 aaKnown RBP1.32□□□□□ -2.2
LINC02540-201ENST00000455554 PDE4DIPQ5VU43 2346 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 PLXNB2O15031 1838 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV1-50A0A075B6I6 118 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1D-17A0A075B6S4 117 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV7A0A075B6U4 112 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 TRBV6-6A0A0A6YYG2 114 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV12-1A0A0B4J245 112 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV40A0A0B4J280 105 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 IGHV5-10-1A0A0J9YXX1 117 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 A0A0J9YY99 117 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 TMEM223A0PJW6 202 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 E7EUB6 86 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 PANO1I0J062 215 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 M0R381 172 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1-5P01602 117 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV3-25P01717 112 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 IGHV3-30P01768 117 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 IGHV3-30-5P0DP03 117 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 DEFA4P12838 97 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 PLNP26678 52 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 FGF12P61328 243 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 UBE2BP63146 152 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 PLGLAQ15195 96 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 Q1T7F1 81 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 ESRGQ1W209 222 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 FAM229BQ4G0N7 80 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 S100A7L2Q5SY68 101 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.32□□□□□ -2.2
LINC02540-201ENST00000455554 CLEC19AQ6UXS0 136 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 C7orf65Q6ZTY9 151 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 DYNAPQ8N1N2 210 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 LINC00337Q8N6G1 96 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 TOMM6Q96B49 74 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 CAMK2N2Q96S95 79 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 TIMM21Q9BVV7 248 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 FGF23Q9GZV9 251 aaPredicted RBP1.32□□□□□ -2.2
LINC02540-201ENST00000455554 PRR14LQ5THK1 2151 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 LTBP4Q8N2S1 1624 aa1.32□□□□□ -2.2
LINC02540-201ENST00000455554 KIAA1549LQ6ZVL6 1849 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 MGAMO43451 1857 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV3-32A0A0A0MS00 114 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV8-3A0A0A6YYJ7 113 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.31□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV3D-7A0A0C4DH55 119 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1-9A0A0C4DH69 117 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 LOC389332A0A1B0GUA5 103 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 A0A1B0GUT8 65 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 A6NN06 94 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 ZNF815PA8K554 130 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 D6R8Y8 96 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 E7EQL1 145 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 F8WEM9 126 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 BUB1B-PAK6H3BSN5 160 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 M0R135 149 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 COX7A2LO14548 114 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 FSTL3O95633 263 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1-39P01597 117 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1D-39P04432 117 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 COX6CP09669 75 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 IGHV1-8P0DP01 117 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 COX6B1P14854 86 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 HMGA1P17096 107 aaKnown RBP1.31□□□□□ -2.2
LINC02540-201ENST00000455554 FUSP35637 526 aaKnown RBP eCLIP1.31□□□□□ -2.2
LINC02540-201ENST00000455554 RPS27P42677 84 aaKnown RBP1.31□□□□□ -2.2
LINC02540-201ENST00000455554 SPINT3P49223 89 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 MP68P56378 58 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 FXYD7P58549 80 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 LINC00313P59037 77 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 BLCAPP62952 87 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 MRPL51Q4U2R6 128 aaKnown RBP1.31□□□□□ -2.2
LINC02540-201ENST00000455554 SOSTDC1Q6X4U4 206 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 ATP11AUNQ6ZP68 121 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 VMO1Q7Z5L0 202 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 GPHB5Q86YW7 130 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 ORMDL3Q8N138 153 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 FAM216BQ8N7L0 139 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 C15orf56Q8N910 161 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 DIRC1Q969H9 104 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 CCL13Q99616 98 aa1.31□□□□□ -2.2
LINC02540-201ENST00000455554 ARHGAP32A7KAX9 2087 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 UNC13CQ8NB66 2214 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1D-42A0A075B6H8 117 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV3-16A0A075B6K0 115 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 A0A087WVE0 104 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms