RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 A6NDX4 124 aa5.7□□□□□ -1.5
BRCC3-208ENST00000453705 B4DSR2 109 aa5.7□□□□□ -1.5
BRCC3-208ENST00000453705 SYS1-DBNDD2H3BUS1 97 aa5.7□□□□□ -1.5
BRCC3-208ENST00000453705 NCR2O95944 276 aa5.7□□□□□ -1.5
BRCC3-208ENST00000453705 MSMBP08118 114 aa5.7□□□□□ -1.5
BRCC3-208ENST00000453705 RRN3P1Q2M238 152 aa5.7□□□□□ -1.5
BRCC3-208ENST00000453705 ANKRD17O75179 2603 aaKnown RBP5.7□□□□□ -1.5
BRCC3-208ENST00000453705 CSMD2Q7Z408 3487 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 FAM223BA6NKX1 122 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 APCSP02743 223 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 KRTAP10-9P60411 292 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 UBE2L3P68036 154 aaKnown RBP5.69□□□□□ -1.5
BRCC3-208ENST00000453705 PLGLAQ15195 96 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 BPIFA4PQ86YQ2 179 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 FAM223AQ8IWN6 122 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 VGLL1Q99990 258 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 IMUPQ9GZP8 106 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 HILPDAQ9Y5L2 63 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 ROS1P08922 2347 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 IGHV4-30-2A0A087WSY4 118 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 VSIG2Q96IQ7 327 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 SND1-IT1Q9HBX3 110 aa5.69□□□□□ -1.5
BRCC3-208ENST00000453705 CR1P17927 2039 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 PLXNB1O43157 2135 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 ARHGAP32A7KAX9 2087 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 IGHV3OR16-12A0A075B7B8 117 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 TRBV7-1A0A0A6YYK4 115 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 TMEM262E9PQX1 116 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 PEX7O00628 323 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 IGHV4-59P01825 116 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 DEFA4P12838 97 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 GPHB5Q86YW7 130 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 IGHV1-58A0A0C4DH39 117 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 SMIM27A0A1W2PRY6 76 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 K7EQG2 157 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 TRACP01848 142 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 LCA10Q71F78 164 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 CHCHD1Q96BP2 118 aaKnown RBP5.68□□□□□ -1.5
BRCC3-208ENST00000453705 CHCHD5Q9BSY4 110 aa5.68□□□□□ -1.5
BRCC3-208ENST00000453705 HBBP68871 147 aa5.67□□□□□ -1.5
BRCC3-208ENST00000453705 ADGRG4Q8IZF6 3080 aa5.67□□□□□ -1.5
BRCC3-208ENST00000453705 IGHV3-38A0A0C4DH36 116 aa5.67□□□□□ -1.5
BRCC3-208ENST00000453705 UBE2L6O14933 153 aa5.67□□□□□ -1.5
BRCC3-208ENST00000453705 LTAP01374 205 aa5.67□□□□□ -1.5
BRCC3-208ENST00000453705 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.67□□□□□ -1.5
BRCC3-208ENST00000453705 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 IGLL5B9A064 214 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 LGALS3P17931 250 aaKnown RBP5.66□□□□□ -1.5
BRCC3-208ENST00000453705 ATP6V0E2Q8NHE4 81 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 GFRA4Q9GZZ7 299 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 M0R2P5 195 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 ORMDL2Q53FV1 153 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 LINC01545Q5VT33 79 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 GTSF1Q8WW33 167 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 USMG5Q96IX5 58 aa5.66□□□□□ -1.5
BRCC3-208ENST00000453705 CCDC168Q8NDH2 2452 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 FBN3Q75N90 2809 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 TRAV12-2A0A075B6T6 113 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 C19orf71A6NCJ1 209 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 H3BT86 120 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 SNCGO76070 127 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 NXPH4O95158 308 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 CTSGP08311 255 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 MORN3Q6PF18 240 aaPredicted RBP5.65□□□□□ -1.5
BRCC3-208ENST00000453705 CELA1Q9UNI1 258 aa5.65□□□□□ -1.5
BRCC3-208ENST00000453705 Q9H3A6 140 aa5.65□□□□□ -1.51
BRCC3-208ENST00000453705 ZNF702PQ9H963 129 aa5.65□□□□□ -1.51
BRCC3-208ENST00000453705 IGHV1OR15-1A0A075B7D0 117 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 EPM2AB3EWF7 344 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 IGLV1-40P01703 118 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 SMIM13P0DJ93 91 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 CRYGAP11844 174 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 CEMP1Q6PRD7 247 aaPredicted RBP5.64□□□□□ -1.51
BRCC3-208ENST00000453705 AMTNQ6UX39 209 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 Q6ZRP5 223 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 SH2D6Q7Z4S9 175 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 RABAC1Q9UI14 185 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 LEPROTL1O95214 131 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 IGLV2-11P01706 119 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 HLA-DRB4P13762 266 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 PRB3Q04118 309 aaPredicted RBP5.64□□□□□ -1.51
BRCC3-208ENST00000453705 FP248Q71RG6 208 aaPredicted RBP5.64□□□□□ -1.51
BRCC3-208ENST00000453705 TOMM6Q96B49 74 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 PRELID3AQ96N28 172 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 HLA-DRB4X5D2U9 266 aa5.64□□□□□ -1.51
BRCC3-208ENST00000453705 DCHS2Q6V1P9 2916 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 NIPBLQ6KC79 2804 aaeCLIP5.63□□□□□ -1.517e-6■□□□□ 10.5
BRCC3-208ENST00000453705 IGLV5-52A0A0A0MRZ9 124 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 LYZP61626 148 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 WFDC2Q14508 124 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 ETDBQ3ZM63 59 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 Q86TA4 180 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 TEN1Q86WV5 123 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 KRTAP1-3Q8IUG1 177 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 MYOZ3Q8TDC0 251 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 TRAV40A0A0B4J280 105 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 TCL1BO95988 128 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 Q6ZSN1 163 aa5.63□□□□□ -1.51
BRCC3-208ENST00000453705 Q8N2B8 174 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms