RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 POLR2GP62487 172 aaKnown RBP eCLIP2.56□□□□□ -2
LINC00393-202ENST00000452852 ZNF846Q147U1 533 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 AMTNQ6UX39 209 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 LINC00305Q7Z4B0 112 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 DAZ4Q86SG3 579 aaKnown RBP2.56□□□□□ -2
LINC00393-202ENST00000452852 BPIFA4PQ86YQ2 179 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 TMEM263Q8WUH6 116 aaKnown RBP2.56□□□□□ -2
LINC00393-202ENST00000452852 GNPNAT1Q96EK6 184 aaPredicted RBP2.56□□□□□ -2
LINC00393-202ENST00000452852 NOP10Q9NPE3 64 aaKnown RBP2.56□□□□□ -2
LINC00393-202ENST00000452852 GSKIPQ9P0R6 139 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 ALG5Q9Y673 324 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 PXMP4Q9Y6I8 212 aa2.56□□□□□ -2
LINC00393-202ENST00000452852 TRGV2A0A075B6R0 118 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 TRAV12-3A0A0B4J271 114 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 A0A0J9YY99 117 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 NDUFB6O95139 128 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 APOBP04114 4563 aaKnown RBP2.55□□□□□ -2
LINC00393-202ENST00000452852 OR4E1P0C645 316 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 LINC00614P0C842 121 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 TAS2R30P59541 319 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 GUK1Q16774 197 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 RGS21Q2M5E4 152 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 IAH1Q2TAA2 248 aaPredicted RBP2.55□□□□□ -2
LINC00393-202ENST00000452852 C10orf113Q5VZT2 155 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 FAM104BQ5XKR9 115 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 C12orf45Q8N5I9 185 aaPredicted RBP2.55□□□□□ -2
LINC00393-202ENST00000452852 ZNF680Q8NEM1 530 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 PACRGQ96M98 296 aaPredicted RBP2.55□□□□□ -2
LINC00393-202ENST00000452852 PFDN5Q99471 154 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 GGACTQ9BVM4 153 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 LRP1BQ9NZR2 4599 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 LINC00588Q9Y4M8 146 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 V9GYH0 126 aa2.55□□□□□ -2
LINC00393-202ENST00000452852 UBE2L5PA0A1B0GUS4 154 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 COLCA2A8K830 154 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 H3BNG1 76 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 TMEM14EPQ6UXP3 125 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 SCGB1D4Q6XE38 83 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 ADM2Q7Z4H4 148 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 SPATA12Q7Z6I5 190 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 COMMD7Q86VX2 200 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 STX12Q86Y82 276 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 AMN1Q8IY45 258 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 ZFP82Q8N141 532 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 ST20-AS1Q8NBB2 130 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 ODF3Q96PU9 254 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 SDHCQ99643 169 aaPredicted RBP2.54□□□□□ -2
LINC00393-202ENST00000452852 MGST2Q99735 147 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 UQCC1Q9NVA1 299 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 ZNF586Q9NXT0 402 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 PRELID1Q9Y255 219 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 LSM5Q9Y4Y9 91 aaKnown RBP2.54□□□□□ -2
LINC00393-202ENST00000452852 TIMM9Q9Y5J7 89 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
LINC00393-202ENST00000452852 DNAH5Q8TE73 4624 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 TRGV1A0A0A0MS02 117 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 C7orf71A4D174 169 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 B4DEV8 164 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.53□□□□□ -2
LINC00393-202ENST00000452852 SLC17A3O00476 420 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 CST7O76096 145 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 SLC25A5P05141 298 aaKnown RBP2.53□□□□□ -2
LINC00393-202ENST00000452852 GPX1P07203 203 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 IGLC2P0DOY2 106 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 PRB4P10163 310 aaPredicted RBP2.53□□□□□ -2
LINC00393-202ENST00000452852 HIST1H1EP10412 219 aaKnown RBP2.53□□□□□ -2
LINC00393-202ENST00000452852 FGF7P21781 194 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 RPL12P30050 165 aaKnown RBP2.53□□□□□ -2
LINC00393-202ENST00000452852 S100A11P31949 105 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 H2BFSP57053 126 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 S100A10P60903 97 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 TMEM78Q5T7P6 136 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 PATE2Q6UY27 113 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 Q6ZTI0 123 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 ATP5L2Q7Z4Y8 100 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 EIF4E3Q8N5X7 224 aaKnown RBP2.53□□□□□ -2
LINC00393-202ENST00000452852 TMEM75Q8N9X5 138 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 LINC00477Q96M19 166 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 UPK3BQ9BT76 320 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 MRPS16Q9Y3D3 137 aaKnown RBP2.53□□□□□ -2
LINC00393-202ENST00000452852 ICOSQ9Y6W8 199 aa2.53□□□□□ -2
LINC00393-202ENST00000452852 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 RYR1P21817 5038 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 TRAV5A0A0B4J249 113 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 TRGV4A0A0C4DH28 118 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 H3BQ15 152 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 K7ERS5 55 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 LYRM1O43325 122 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 IGHV3-53P01767 116 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 IL7P13232 177 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 RNASE4P34096 147 aaKnown RBP2.52□□□□□ -2.01
LINC00393-202ENST00000452852 CSN1S1P47710 185 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 CEBPGP53567 150 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 LINC00315P59091 139 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 PDE6HQ13956 83 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 ESRGQ1W209 222 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 MIC13Q5XKP0 118 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 ZNF431Q8TF32 576 aaPredicted RBP2.52□□□□□ -2.01
LINC00393-202ENST00000452852 C2orf50Q96LR7 162 aa2.52□□□□□ -2.01
LINC00393-202ENST00000452852 KCNIP2Q9NS61 270 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms