RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 H3BQ15 152 aa1.72□□□□□ -2.13
LINC00440-201ENST00000446579 UBE2D1P51668 147 aa1.72□□□□□ -2.13
LINC00440-201ENST00000446579 GNG11P61952 73 aa1.72□□□□□ -2.13
LINC00440-201ENST00000446579 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
LINC00440-201ENST00000446579 MADDQ8WXG6 1647 aa1.72□□□□□ -2.13
LINC00440-201ENST00000446579 RNF17Q9BXT8 1623 aaKnown RBP1.72□□□□□ -2.13
LINC00440-201ENST00000446579 LMTK2Q8IWU2 1503 aa1.71□□□□□ -2.14
LINC00440-201ENST00000446579 PTPRMP28827 1452 aa1.71□□□□□ -2.14
LINC00440-201ENST00000446579 ATP7BP35670 1465 aa1.71□□□□□ -2.14
LINC00440-201ENST00000446579 CDK12Q9NYV4 1490 aaPredicted RBP1.71□□□□□ -2.14
LINC00440-201ENST00000446579 LINC00032P0C843 101 aa1.71□□□□□ -2.14
LINC00440-201ENST00000446579 SCP2D1Q9UJQ7 156 aa1.71□□□□□ -2.14
LINC00440-201ENST00000446579 V9GYV3 84 aa1.71□□□□□ -2.14
LINC00440-201ENST00000446579 EDC4Q6P2E9 1401 aaKnown RBP1.71□□□□□ -2.14
LINC00440-201ENST00000446579 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.71□□□□□ -2.14
LINC00440-201ENST00000446579 PREX2Q70Z35 1606 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 USP32Q8NFA0 1604 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 MAP3K4Q9Y6R4 1608 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 MYH7P12883 1935 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 LYNX1P0DP58 116 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 ANK1P16157 1881 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 CCL3L1P16619 93 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 CR1P17927 2039 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 EFNA4P52798 201 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 KLKP1Q107X0 134 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 LINC00575Q6W349 94 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 DPY30Q9C005 99 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 Q9H521 79 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 PLXNA4Q9HCM2 1894 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 UGGT1Q9NYU2 1555 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 IQGAP1P46940 1657 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 ABCC1P33527 1531 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 EFCAB6Q5THR3 1501 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 NINQ8N4C6 2090 aa1.7□□□□□ -2.14
LINC00440-201ENST00000446579 CLTCL1P53675 1640 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 SHROOM2Q13796 1616 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 LRRIQ1Q96JM4 1722 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 CDC42BPGQ6DT37 1551 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 SIP14410 1827 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 ANGP03950 147 aaKnown RBP1.69□□□□□ -2.14
LINC00440-201ENST00000446579 ELOF1P60002 83 aaKnown RBP1.69□□□□□ -2.14
LINC00440-201ENST00000446579 KRTDAPP60985 99 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 ATP7AQ04656 1500 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 NEXMIFQ5QGS0 1516 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 ZFYVE16Q7Z3T8 1539 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 INTS1Q8N201 2190 aaKnown RBP1.69□□□□□ -2.14
LINC00440-201ENST00000446579 ABCA9Q8IUA7 1624 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 MYO3AQ8NEV4 1616 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 TRPM7Q96QT4 1865 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 MLH3Q9UHC1 1453 aa1.69□□□□□ -2.14
LINC00440-201ENST00000446579 ALPK3Q96L96 1907 aa1.68□□□□□ -2.14
LINC00440-201ENST00000446579 TET3O43151 1660 aa1.68□□□□□ -2.14
LINC00440-201ENST00000446579 CHD3Q12873 2000 aaKnown RBP1.68□□□□□ -2.14
LINC00440-201ENST00000446579 MPC2O95563 127 aa1.68□□□□□ -2.14
LINC00440-201ENST00000446579 EDDM3BP56851 147 aa1.68□□□□□ -2.14
LINC00440-201ENST00000446579 GNGT1P63211 74 aa1.68□□□□□ -2.14
LINC00440-201ENST00000446579 Q6ZSA8 131 aa1.68□□□□□ -2.14
LINC00440-201ENST00000446579 TMEM14BQ9NUH8 114 aa1.68□□□□□ -2.14
LINC00440-201ENST00000446579 CDC42BPAQ5VT25 1732 aa1.68□□□□□ -2.14
LINC00440-201ENST00000446579 RBBP6Q7Z6E9 1792 aaKnown RBP1.67□□□□□ -2.14
LINC00440-201ENST00000446579 ANKARQ7Z5J8 1434 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 ABCC3O15438 1527 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 LRRC7Q96NW7 1537 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 TULP4Q9NRJ4 1543 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 EML5Q05BV3 1969 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 EXPH5Q8NEV8 1989 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 ABCA6Q8N139 1617 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 SPHKAPQ2M3C7 1700 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.67□□□□□ -2.14
LINC00440-201ENST00000446579 A0A0D9SFI3 127 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 NAP1L6A6NFF2 107 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 H3BQF6 201 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 GNGT2O14610 69 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 GNG2P59768 71 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 UBA52P62987 128 aaKnown RBP1.67□□□□□ -2.14
LINC00440-201ENST00000446579 GLI2P10070 1586 aa1.67□□□□□ -2.14
LINC00440-201ENST00000446579 INO80Q9ULG1 1556 aaPredicted RBP1.67□□□□□ -2.14
LINC00440-201ENST00000446579 MYO18AQ92614 2054 aaKnown RBP1.67□□□□□ -2.14
LINC00440-201ENST00000446579 C10orf71Q711Q0 1435 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 DEPDC5O75140 1603 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 TRBV7-3A0A075B6L6 115 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 PPP1R17O96001 155 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 SNHG12Q9BXW3 62 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 LINC00474Q9P2X8 69 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 CD163L1Q9NR16 1453 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 MYOM1P52179 1685 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 SHPRHQ149N8 1683 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 MYO5CQ9NQX4 1742 aa1.66□□□□□ -2.14
LINC00440-201ENST00000446579 QRICH2Q9H0J4 1663 aa1.65□□□□□ -2.15
LINC00440-201ENST00000446579 ERCC6L2Q5T890 1561 aa1.65□□□□□ -2.15
LINC00440-201ENST00000446579 NRKQ7Z2Y5 1582 aa1.65□□□□□ -2.15
LINC00440-201ENST00000446579 SORL1Q92673 2214 aa1.65□□□□□ -2.15
LINC00440-201ENST00000446579 C10orf99Q6UWK7 81 aa1.65□□□□□ -2.15
LINC00440-201ENST00000446579 TSLPQ969D9 159 aa1.65□□□□□ -2.15
LINC00440-201ENST00000446579 MGST2Q99735 147 aa1.65□□□□□ -2.15
LINC00440-201ENST00000446579 TNRC6BQ9UPQ9 1833 aaKnown RBP1.65□□□□□ -2.15
LINC00440-201ENST00000446579 MROH1Q8NDA8 1641 aa1.65□□□□□ -2.15
LINC00440-201ENST00000446579 TNRC6AQ8NDV7 1962 aaKnown RBP1.65□□□□□ -2.15
LINC00440-201ENST00000446579 SDK1Q7Z5N4 2213 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 PTPRDP23468 1912 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms