RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 GAGE12BA1L429 117 aa10.34□□□□□ -0.75
TNFRSF1A-204ENST00000440083 PLAC8L1A1L4L8 177 aa10.34□□□□□ -0.75
TNFRSF1A-204ENST00000440083 LINC00587B1AMM8 73 aa10.34□□□□□ -0.75
TNFRSF1A-204ENST00000440083 CIDEAO60543 219 aa10.34□□□□□ -0.75
TNFRSF1A-204ENST00000440083 GAGE7O76087 117 aa10.34□□□□□ -0.75
TNFRSF1A-204ENST00000440083 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
TNFRSF1A-204ENST00000440083 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
TNFRSF1A-204ENST00000440083 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
TNFRSF1A-204ENST00000440083 P0DMU3 169 aa10.33□□□□□ -0.76
TNFRSF1A-204ENST00000440083 FAM231AP0DMU4 169 aa10.33□□□□□ -0.76
TNFRSF1A-204ENST00000440083 FAM231CP0DMU5 169 aa10.33□□□□□ -0.76
TNFRSF1A-204ENST00000440083 MIFP14174 115 aa10.33□□□□□ -0.76
TNFRSF1A-204ENST00000440083 C11orf68Q9H3H3 251 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-204ENST00000440083 TENM2Q9NT68 2774 aa10.33□□□□□ -0.76
TNFRSF1A-204ENST00000440083 hDV102S1A0JD36 115 aa10.32□□□□□ -0.76
TNFRSF1A-204ENST00000440083 K7EQD1 137 aa10.32□□□□□ -0.76
TNFRSF1A-204ENST00000440083 TSHBP01222 138 aa10.32□□□□□ -0.76
TNFRSF1A-204ENST00000440083 EMP1P54849 157 aa10.32□□□□□ -0.76
TNFRSF1A-204ENST00000440083 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
TNFRSF1A-204ENST00000440083 ZNF479Q96JC4 524 aa10.32□□□□□ -0.76
TNFRSF1A-204ENST00000440083 CELA1Q9UNI1 258 aa10.32□□□□□ -0.76
TNFRSF1A-204ENST00000440083 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
TNFRSF1A-204ENST00000440083 NANOS2P60321 138 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-204ENST00000440083 MAJINQ3KP22 176 aa10.31□□□□□ -0.76
TNFRSF1A-204ENST00000440083 Q6ZSN1 163 aa10.31□□□□□ -0.76
TNFRSF1A-204ENST00000440083 ERASQ7Z444 233 aa10.31□□□□□ -0.76
TNFRSF1A-204ENST00000440083 UQCR10Q9UDW1 63 aa10.31□□□□□ -0.76
TNFRSF1A-204ENST00000440083 PLECQ15149 4684 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 TRAV12-1A0A0B4J245 112 aa10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 DPM2O94777 84 aa10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 ODF1Q14990 250 aa10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 TMEM141Q96I45 108 aa10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 MIEN1Q9BRT3 115 aa10.3□□□□□ -0.76
TNFRSF1A-204ENST00000440083 A0A087WX48 190 aa10.29□□□□□ -0.76
TNFRSF1A-204ENST00000440083 IGKCP01834 107 aa10.29□□□□□ -0.76
TNFRSF1A-204ENST00000440083 COTL1Q14019 142 aa10.29□□□□□ -0.76
TNFRSF1A-204ENST00000440083 TIMM17AQ99595 171 aa10.29□□□□□ -0.76
TNFRSF1A-204ENST00000440083 DKK2Q9UBU2 259 aa10.29□□□□□ -0.76
TNFRSF1A-204ENST00000440083 C3orf84H3BNL1 204 aa10.28□□□□□ -0.76
TNFRSF1A-204ENST00000440083 IGLC3P0DOY3 106 aa10.28□□□□□ -0.76
TNFRSF1A-204ENST00000440083 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
TNFRSF1A-204ENST00000440083 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
TNFRSF1A-204ENST00000440083 BAALCQ8WXS3 180 aa10.28□□□□□ -0.76
TNFRSF1A-204ENST00000440083 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
TNFRSF1A-204ENST00000440083 PLNP26678 52 aa10.27□□□□□ -0.77
TNFRSF1A-204ENST00000440083 HNRNPA3P51991 378 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-204ENST00000440083 RPL39P62891 51 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-204ENST00000440083 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
TNFRSF1A-204ENST00000440083 ZNRF2Q8NHG8 242 aa10.27□□□□□ -0.77
TNFRSF1A-204ENST00000440083 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF1A-204ENST00000440083 CHTOPQ9Y3Y2 248 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-204ENST00000440083 LYRM9A8MSI8 78 aa10.26□□□□□ -0.77
TNFRSF1A-204ENST00000440083 F8VRH5 84 aa10.26□□□□□ -0.77
TNFRSF1A-204ENST00000440083 DEFB130BP0DP73 79 aa10.26□□□□□ -0.77
TNFRSF1A-204ENST00000440083 DEFB130AP0DP74 79 aa10.26□□□□□ -0.77
TNFRSF1A-204ENST00000440083 PRADC1Q9BSG0 188 aa10.26□□□□□ -0.77
TNFRSF1A-204ENST00000440083 MRPL35Q9NZE8 188 aaKnown RBP10.26□□□□□ -0.77
TNFRSF1A-204ENST00000440083 ALMS1Q8TCU4 4167 aa10.26□□□□□ -0.77
TNFRSF1A-204ENST00000440083 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 TRBV6-4A0A1B0GX49 114 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 GAGE12JA6NER3 117 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 IGIPA6NJ69 53 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 GAGE1Q13065 139 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 GAGE4Q13068 117 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 GAGE5Q13069 117 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 C12orf74Q32Q52 190 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 GAGE13Q4V321 117 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 PAPPA-AS1Q5QFB9 102 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 FAM222AQ5U5X8 452 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 SLC25A29Q8N8R3 303 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 C14orf144Q96I85 54 aa10.25□□□□□ -0.77
TNFRSF1A-204ENST00000440083 PMVKQ15126 192 aa10.24□□□□□ -0.77
TNFRSF1A-204ENST00000440083 SLC25A34Q6PIV7 304 aa10.24□□□□□ -0.77
TNFRSF1A-204ENST00000440083 Q6ZTC4 211 aa10.24□□□□□ -0.77
TNFRSF1A-204ENST00000440083 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
TNFRSF1A-204ENST00000440083 LINC00612Q8N6U2 182 aa10.24□□□□□ -0.77
TNFRSF1A-204ENST00000440083 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
TNFRSF1A-204ENST00000440083 DNAH1Q9P2D7 4330 aa10.24□□□□□ -0.77
TNFRSF1A-204ENST00000440083 KMT2CQ8NEZ4 4911 aaKnown RBP10.23□□□□□ -0.77
TNFRSF1A-204ENST00000440083 PRSS29PA6NIE9 313 aa10.23□□□□□ -0.77
TNFRSF1A-204ENST00000440083 Q9UF83 564 aa10.23□□□□□ -0.77
TNFRSF1A-204ENST00000440083 UBE2D3P61077 147 aa10.22□□□□□ -0.77
TNFRSF1A-204ENST00000440083 UBE2D2P62837 147 aa10.22□□□□□ -0.77
TNFRSF1A-204ENST00000440083 SMAGPQ0VAQ4 97 aa10.22□□□□□ -0.77
TNFRSF1A-204ENST00000440083 FHL2Q14192 279 aa10.22□□□□□ -0.77
TNFRSF1A-204ENST00000440083 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
TNFRSF1A-204ENST00000440083 STPG4Q8N801 248 aa10.22□□□□□ -0.77
TNFRSF1A-204ENST00000440083 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
TNFRSF1A-204ENST00000440083 SACSQ9NZJ4 4579 aa10.22□□□□□ -0.77
TNFRSF1A-204ENST00000440083 NPSP0C0P6 89 aa10.21□□□□□ -0.77
TNFRSF1A-204ENST00000440083 SPART-AS1P0CW21 52 aa10.21□□□□□ -0.77
TNFRSF1A-204ENST00000440083 COX8AP10176 69 aa10.21□□□□□ -0.77
TNFRSF1A-204ENST00000440083 NMUP48645 174 aa10.21□□□□□ -0.77
TNFRSF1A-204ENST00000440083 DAD1P61803 113 aa10.21□□□□□ -0.77
TNFRSF1A-204ENST00000440083 ZC2HC1BQ5TFG8 222 aa10.21□□□□□ -0.77
TNFRSF1A-204ENST00000440083 CEMP1Q6PRD7 247 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1779.8 ms