RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 LINC00467Q9BRT7 94 aa14.09□□□□□ -0.15
FAM239A-202ENST00000438107 POLQO75417 2590 aa14.09□□□□□ -0.15
FAM239A-202ENST00000438107 IGHV3-73A0A0B4J1V6 119 aa14.08□□□□□ -0.16
FAM239A-202ENST00000438107 SLURP1P55000 103 aa14.08□□□□□ -0.16
FAM239A-202ENST00000438107 PROK1P58294 105 aa14.08□□□□□ -0.16
FAM239A-202ENST00000438107 SPXQ9BT56 116 aa14.08□□□□□ -0.16
FAM239A-202ENST00000438107 NACAE9PAV3 2078 aa14.08□□□□□ -0.16
FAM239A-202ENST00000438107 IGHV1-58A0A0C4DH39 117 aa14.07□□□□□ -0.16
FAM239A-202ENST00000438107 RBMY1BA6NDE4 496 aaKnown RBP14.07□□□□□ -0.16
FAM239A-202ENST00000438107 RBMY1EA6NEQ0 496 aaKnown RBP14.07□□□□□ -0.16
FAM239A-202ENST00000438107 RBMY1DP0C7P1 496 aaKnown RBP14.07□□□□□ -0.16
FAM239A-202ENST00000438107 HTN1P15515 57 aa14.07□□□□□ -0.16
FAM239A-202ENST00000438107 PEMTQ9UBM1 199 aa14.07□□□□□ -0.16
FAM239A-202ENST00000438107 TINCRA0A1B0GVN0 87 aa14.07□□□□□ -0.16
FAM239A-202ENST00000438107 RAX2Q96IS3 184 aa14.07□□□□□ -0.16
FAM239A-202ENST00000438107 DNAJC30Q96LL9 226 aa14.07□□□□□ -0.16
FAM239A-202ENST00000438107 LITAFQ99732 161 aa14.06□□□□□ -0.16
FAM239A-202ENST00000438107 CHCHD7Q9BUK0 85 aa14.06□□□□□ -0.16
FAM239A-202ENST00000438107 ANKRD17O75179 2603 aaKnown RBP14.06□□□□□ -0.16
FAM239A-202ENST00000438107 Q8N2B8 174 aa14.06□□□□□ -0.16
FAM239A-202ENST00000438107 MAPK1IP1LQ8NDC0 245 aa14.06□□□□□ -0.16
FAM239A-202ENST00000438107 SPANXDQ9BXN6 97 aa14.06□□□□□ -0.16
FAM239A-202ENST00000438107 SPANXCQ9NY87 97 aa14.06□□□□□ -0.16
FAM239A-202ENST00000438107 USP9YO00507 2555 aaPredicted RBP14.05□□□□□ -0.16
FAM239A-202ENST00000438107 CIDEAO60543 219 aa14.05□□□□□ -0.16
FAM239A-202ENST00000438107 UBE2D4Q9Y2X8 147 aa14.05□□□□□ -0.16
FAM239A-202ENST00000438107 A0A1B0GV72 72 aa14.05□□□□□ -0.16
FAM239A-202ENST00000438107 SLC25A20O43772 301 aa14.05□□□□□ -0.16
FAM239A-202ENST00000438107 ANKRD29Q8N6D5 301 aa14.05□□□□□ -0.16
FAM239A-202ENST00000438107 IGHV4-31P0DP07 118 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 CEMP1Q6PRD7 247 aaPredicted RBP14.03□□□□□ -0.16
FAM239A-202ENST00000438107 LINC01600Q96MT4 127 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 BEX4Q9NWD9 120 aaPredicted RBP14.03□□□□□ -0.16
FAM239A-202ENST00000438107 TRBV30A0A0K0K1B3 111 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 IGHV3-53P01767 116 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 DEFB136Q30KP8 78 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 BEAN1Q3B7T3 259 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 C18orf65Q6ZTR6 163 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 TMEM61Q8N0U2 210 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 C11orf72Q8NBR9 251 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 VSIG2Q96IQ7 327 aa14.03□□□□□ -0.16
FAM239A-202ENST00000438107 TRAV8-3A0A0A6YYJ7 113 aa14.02□□□□□ -0.16
FAM239A-202ENST00000438107 FHL3Q13643 280 aa14.02□□□□□ -0.16
FAM239A-202ENST00000438107 ATXN8Q156A1 80 aa14.02□□□□□ -0.16
FAM239A-202ENST00000438107 Q6ZSN1 163 aa14.02□□□□□ -0.16
FAM239A-202ENST00000438107 C4orf3Q8WVX3 66 aa14.02□□□□□ -0.16
FAM239A-202ENST00000438107 MAP6D1Q9H9H5 199 aa14.02□□□□□ -0.16
FAM239A-202ENST00000438107 NDUFA12Q9UI09 145 aa14.02□□□□□ -0.16
FAM239A-202ENST00000438107 ZANQ9Y493 2812 aa14.02□□□□□ -0.17
FAM239A-202ENST00000438107 C9JAW5 83 aa14.02□□□□□ -0.17
FAM239A-202ENST00000438107 PRRC2AP48634 2157 aaKnown RBP14.01□□□□□ -0.17
FAM239A-202ENST00000438107 SORL1Q92673 2214 aa14.01□□□□□ -0.17
FAM239A-202ENST00000438107 Q1RN00 199 aa14.01□□□□□ -0.17
FAM239A-202ENST00000438107 TMEM262E9PQX1 116 aa14□□□□□ -0.17
FAM239A-202ENST00000438107 Q6ZUT4 128 aa14□□□□□ -0.17
FAM239A-202ENST00000438107 RNF183Q96D59 192 aa14□□□□□ -0.17
FAM239A-202ENST00000438107 LINC01587Q99440 93 aa14□□□□□ -0.17
FAM239A-202ENST00000438107 PTPN13Q12923 2485 aa14□□□□□ -0.17
FAM239A-202ENST00000438107 H7C2G1 150 aa14□□□□□ -0.17
FAM239A-202ENST00000438107 RS1O15537 224 aa14□□□□□ -0.17
FAM239A-202ENST00000438107 ADARB2-AS1A8MUL3 147 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 INSP01308 110 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 PRM2P04554 102 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 SPINK8P0C7L1 97 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 MIAQ16674 131 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 CLUHP3Q96NS8 147 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 Q9UF83 564 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 CR1P17927 2039 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 TIMM17BO60830 172 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 RNASE13Q5GAN3 156 aaKnown RBP13.99□□□□□ -0.17
FAM239A-202ENST00000438107 ZFAND6Q6FIF0 208 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 DYNLRB2Q8TF09 96 aa13.99□□□□□ -0.17
FAM239A-202ENST00000438107 ABCA12Q86UK0 2595 aa13.98□□□□□ -0.17
FAM239A-202ENST00000438107 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.98□□□□□ -0.17
FAM239A-202ENST00000438107 IGKV2-29A2NJV5 120 aaPredicted RBP13.98□□□□□ -0.17
FAM239A-202ENST00000438107 LINC01620Q4KN68 170 aa13.98□□□□□ -0.17
FAM239A-202ENST00000438107 TIRAPP58753 221 aa13.98□□□□□ -0.17
FAM239A-202ENST00000438107 YAE1D1Q9NRH1 226 aa13.98□□□□□ -0.17
FAM239A-202ENST00000438107 XGP55808 180 aa13.97□□□□□ -0.17
FAM239A-202ENST00000438107 ADAMTSL4-AS1Q5T5F5 129 aa13.97□□□□□ -0.17
FAM239A-202ENST00000438107 GEMIN7Q9H840 131 aaKnown RBP13.97□□□□□ -0.17
FAM239A-202ENST00000438107 IGLV5-45A0A087WSX0 123 aa13.96□□□□□ -0.17
FAM239A-202ENST00000438107 MT-ATP8P03928 68 aa13.96□□□□□ -0.17
FAM239A-202ENST00000438107 PRSS2P07478 247 aa13.96□□□□□ -0.17
FAM239A-202ENST00000438107 DEFB114Q30KQ6 69 aa13.96□□□□□ -0.17
FAM239A-202ENST00000438107 TRIAP1O43715 76 aa13.96□□□□□ -0.18
FAM239A-202ENST00000438107 KRTAP10-9P60411 292 aa13.96□□□□□ -0.18
FAM239A-202ENST00000438107 CKS1BP61024 79 aa13.96□□□□□ -0.18
FAM239A-202ENST00000438107 IFITM1P13164 125 aa13.95□□□□□ -0.18
FAM239A-202ENST00000438107 ICOSQ9Y6W8 199 aa13.95□□□□□ -0.18
FAM239A-202ENST00000438107 TRBV10-2A0A0K0K1G8 114 aa13.94□□□□□ -0.18
FAM239A-202ENST00000438107 IGHV3-38A0A0C4DH36 116 aa13.93□□□□□ -0.18
FAM239A-202ENST00000438107 NAV2Q8IVL1 2488 aa13.92□□□□□ -0.18
FAM239A-202ENST00000438107 NDUFA1O15239 70 aa13.92□□□□□ -0.18
FAM239A-202ENST00000438107 COX6CP09669 75 aa13.92□□□□□ -0.18
FAM239A-202ENST00000438107 RPL13AP40429 203 aaKnown RBP13.92□□□□□ -0.18
FAM239A-202ENST00000438107 CDKN2A-AS1Q9UH64 79 aa13.92□□□□□ -0.18
FAM239A-202ENST00000438107 TRAV25A0A0B4J276 109 aa13.91□□□□□ -0.18
FAM239A-202ENST00000438107 A8MZ25 164 aa13.91□□□□□ -0.18
FAM239A-202ENST00000438107 KHDC1LQ5JSQ8 128 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms