RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 TDRG1Q3Y452 100 aa8.65□□□□□ -1.03
PTCH1-208ENST00000430669 ANAPC13Q9BS18 74 aa8.64□□□□□ -1.03
PTCH1-208ENST00000430669 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
PTCH1-208ENST00000430669 CFC1P0CG37 223 aa8.64□□□□□ -1.03
PTCH1-208ENST00000430669 CCL18P55774 89 aa8.64□□□□□ -1.03
PTCH1-208ENST00000430669 ABCA2Q9BZC7 2435 aa8.64□□□□□ -1.03
PTCH1-208ENST00000430669 K7ERJ3 54 aa8.64□□□□□ -1.03
PTCH1-208ENST00000430669 MRPS12O15235 138 aaKnown RBP8.63□□□□□ -1.03
PTCH1-208ENST00000430669 ANKRD39Q53RE8 183 aa8.63□□□□□ -1.03
PTCH1-208ENST00000430669 USP9YO00507 2555 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-208ENST00000430669 TRBV6-5A0A0K0K1A5 114 aa8.63□□□□□ -1.03
PTCH1-208ENST00000430669 RNF185Q96GF1 192 aa8.63□□□□□ -1.03
PTCH1-208ENST00000430669 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
PTCH1-208ENST00000430669 HILS1P60008 231 aa8.63□□□□□ -1.03
PTCH1-208ENST00000430669 H0YGX0 51 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 CDH23Q9H251 3354 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 CITED1Q99966 193 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 A0A0J9YY99 117 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 MIFP14174 115 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 VSIG2Q96IQ7 327 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 AMTNQ6UX39 209 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 DEFB135Q30KP9 77 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 CFAP126Q5VTH2 177 aa8.62□□□□□ -1.03
PTCH1-208ENST00000430669 FRMD6-AS1P0C7T7 363 aa8.61□□□□□ -1.03
PTCH1-208ENST00000430669 CLPSL2Q6UWE3 100 aa8.61□□□□□ -1.03
PTCH1-208ENST00000430669 MRAPQ8TCY5 172 aa8.61□□□□□ -1.03
PTCH1-208ENST00000430669 M0QY20 66 aa8.61□□□□□ -1.03
PTCH1-208ENST00000430669 NRACQ8N912 160 aa8.61□□□□□ -1.03
PTCH1-208ENST00000430669 ACYP1P07311 99 aa8.61□□□□□ -1.03
PTCH1-208ENST00000430669 GAGE2AQ6NT46 116 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 IL17DQ8TAD2 202 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 A0A096LPF7 62 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 Q6ZQT7 251 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 H3BMG7 143 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 TM2D2Q9BX73 214 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 IGKV2D-24A0A075B6R9 120 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 DEFB1P60022 68 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 KIR2DL5BQ8NHK3 375 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 TP53TG3Q9ULZ0 132 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 DOPEY1Q5JWR5 2465 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 C9orf85Q96MD7 179 aa8.6□□□□□ -1.03
PTCH1-208ENST00000430669 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
PTCH1-208ENST00000430669 TRBV6-4A0A1B0GX49 114 aa8.59□□□□□ -1.03
PTCH1-208ENST00000430669 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
PTCH1-208ENST00000430669 ORMDL1Q9P0S3 153 aa8.59□□□□□ -1.03
PTCH1-208ENST00000430669 MRGPRG-AS1Q2M3A8 158 aa8.59□□□□□ -1.03
PTCH1-208ENST00000430669 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
PTCH1-208ENST00000430669 CARD19Q96LW7 228 aa8.58□□□□□ -1.04
PTCH1-208ENST00000430669 PKD1L2Q7Z442 2459 aa8.58□□□□□ -1.04
PTCH1-208ENST00000430669 LY6G6DO95868 133 aa8.58□□□□□ -1.04
PTCH1-208ENST00000430669 C16orf95Q9H693 158 aa8.58□□□□□ -1.04
PTCH1-208ENST00000430669 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
PTCH1-208ENST00000430669 RS1O15537 224 aa8.58□□□□□ -1.04
PTCH1-208ENST00000430669 MIAQ16674 131 aa8.58□□□□□ -1.04
PTCH1-208ENST00000430669 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
PTCH1-208ENST00000430669 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
PTCH1-208ENST00000430669 IGLL5B9A064 214 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 NDUFA1O15239 70 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 UBL5Q9BZL1 73 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 CLUHP3Q96NS8 147 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 INAFM1C9JVW0 142 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 IGHV3-30-3P0DP02 117 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 LINC01006Q8NI28 216 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 A4D1N5 150 aa8.57□□□□□ -1.04
PTCH1-208ENST00000430669 KLK5Q9Y337 293 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-208ENST00000430669 F8W735 103 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-208ENST00000430669 Q6ZUT4 128 aa8.56□□□□□ -1.04
PTCH1-208ENST00000430669 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-208ENST00000430669 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
PTCH1-208ENST00000430669 TIRAPP58753 221 aa8.56□□□□□ -1.04
PTCH1-208ENST00000430669 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
PTCH1-208ENST00000430669 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
PTCH1-208ENST00000430669 A0A0B4J2C4 111 aa8.55□□□□□ -1.04
PTCH1-208ENST00000430669 MRPS36P82909 103 aaKnown RBP8.55□□□□□ -1.04
PTCH1-208ENST00000430669 RBMY1FQ15415 496 aaKnown RBP8.55□□□□□ -1.04
PTCH1-208ENST00000430669 NXPH4O95158 308 aa8.55□□□□□ -1.04
PTCH1-208ENST00000430669 FXYD2P54710 66 aa8.55□□□□□ -1.04
PTCH1-208ENST00000430669 LINC00467Q9BRT7 94 aa8.55□□□□□ -1.04
PTCH1-208ENST00000430669 C2CD3Q4AC94 2353 aa8.55□□□□□ -1.04
PTCH1-208ENST00000430669 HIST2H2BCQ6DN03 193 aa8.55□□□□□ -1.04
PTCH1-208ENST00000430669 Q6ZTI0 123 aa8.55□□□□□ -1.04
PTCH1-208ENST00000430669 ANKRD29Q8N6D5 301 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 TIMM17BO60830 172 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 FAM110AQ9BQ89 295 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 HIST1H4AP62805 103 aaKnown RBP8.54□□□□□ -1.04
PTCH1-208ENST00000430669 C14orf177Q52M58 125 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 TRIOO75962 3097 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 IGLV4-3A0A075B6K6 122 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 SETD2Q9BYW2 2564 aaPredicted RBP8.54□□□□□ -1.04
PTCH1-208ENST00000430669 ETDBQ3ZM63 59 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 C11orf45Q8TAV5 145 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 PRUNE2Q8WUY3 3088 aa8.54□□□□□ -1.04
PTCH1-208ENST00000430669 A0A1W2PPR1 153 aa8.53□□□□□ -1.04
PTCH1-208ENST00000430669 CR1P17927 2039 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms