RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PTH2Q96A98 100 aa6.45□□□□□ -1.38
GABPB1-205ENST00000429662 MDFICQ9P1T7 246 aa6.45□□□□□ -1.38
GABPB1-205ENST00000429662 IGKV3-7A0A075B6H7 116 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 IGHV4-30-2A0A087WSY4 118 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 TRAV2A0A0B4J234 112 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 I3L3M4 83 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 M0QY20 66 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 LEPROTO15243 131 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 LGALS3P17931 250 aaKnown RBP6.44□□□□□ -1.38
GABPB1-205ENST00000429662 WFDC2Q14508 124 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 LINC01356Q8N9X3 169 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 PLEKHB2Q96CS7 222 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 SPATA25Q9BR10 227 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 PRO0461Q9UI25 63 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 A0A087WWL8 130 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 GAGE12HA6NDE8 117 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 TMEM238C9JI98 176 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 DEFB1P60022 68 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 UBE2D3P61077 147 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 UBE2D2P62837 147 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 ZNF56Q15929 161 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 TMEM170BQ5T4T1 132 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 LCNL1Q6ZST4 164 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.44□□□□□ -1.38
GABPB1-205ENST00000429662 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 PYGO1Q9Y3Y4 419 aa6.44□□□□□ -1.38
GABPB1-205ENST00000429662 TMEM223A0PJW6 202 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 J3QQQ9 107 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 M0QXV9 152 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 SPRY2O43597 315 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 IGHV3-30P01768 117 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 ZNF688P0C7X2 276 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 IGHV3-30-5P0DP03 117 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 SRD5A1P18405 259 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 NDUFA11Q86Y39 141 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 C20orf203Q8NBC4 194 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 UBE2E2Q96LR5 201 aa6.43□□□□□ -1.38
GABPB1-205ENST00000429662 RYR2Q92736 4967 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 WNK2Q9Y3S1 2297 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
GABPB1-205ENST00000429662 A8MTW9 85 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 TSPAN13O95857 204 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 DEFB112Q30KQ8 113 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 ETDBQ3ZM63 59 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 FAM74A4Q5TZK3 123 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 CFAP126Q5VTH2 177 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 Q8N1Y9 231 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 KLHL30-AS1Q8NEE0 82 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 SPAG8Q99932 426 aaPredicted RBP6.42□□□□□ -1.38
GABPB1-205ENST00000429662 C1QTNF4Q9BXJ3 329 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 JPT2Q9H910 190 aa6.42□□□□□ -1.38
GABPB1-205ENST00000429662 COL7A1Q02388 2944 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 A0A0B4J2C4 111 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 A8MWV9 139 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 APOMO95445 188 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 PSMB2P49721 201 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 RPL39P62891 51 aaKnown RBP6.41□□□□□ -1.38
GABPB1-205ENST00000429662 AMTNQ6UX39 209 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 SBSPONQ8IVN8 264 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 ZNRF2Q8NHG8 242 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 LINC00467Q9BRT7 94 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 PRO1854Q9UHT4 67 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 VPREB3Q9UKI3 123 aa6.41□□□□□ -1.38
GABPB1-205ENST00000429662 TSSC4Q9Y5U2 329 aaPredicted RBP6.41□□□□□ -1.38
GABPB1-205ENST00000429662 LOC107984156A0A0G2JMH3 177 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 RHODO00212 210 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 AZU1P20160 251 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 FOXI1Q12951 378 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 LCE1DQ5T752 114 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 ARL17AQ8IVW1 177 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 PPDPFLQ8WWR9 84 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 DNAJC30Q96LL9 226 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 AMELXQ99217 191 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 SELENOKQ9Y6D0 94 aa6.4□□□□□ -1.39
GABPB1-205ENST00000429662 IGHV4-59P01825 116 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 CFC1BP0CG36 223 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 CFC1P0CG37 223 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 P0DMU3 169 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 FAM231AP0DMU4 169 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 FAM231CP0DMU5 169 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 IGHV4-31P0DP07 118 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 ZNF22P17026 224 aaPredicted RBP6.39□□□□□ -1.39
GABPB1-205ENST00000429662 SYNJ2BPP57105 145 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 SPINK13Q1W4C9 94 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 Q6YL49 198 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 SH2D6Q7Z4S9 175 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 MTURNQ8N3F0 131 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 SPANXA1Q9NS26 97 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 PEMTQ9UBM1 199 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
GABPB1-205ENST00000429662 IGLV4-3A0A075B6K6 122 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 TRAV12-2A0A075B6T6 113 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 TMEM262E9PQX1 116 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 M0R2P5 195 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 SCGB1C2P0DMR2 95 aa6.38□□□□□ -1.39
GABPB1-205ENST00000429662 HOXD3P31249 432 aaPredicted RBP6.38□□□□□ -1.39
GABPB1-205ENST00000429662 MRPS36P82909 103 aaKnown RBP6.38□□□□□ -1.39
GABPB1-205ENST00000429662 ZNF415Q09FC8 603 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms