RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 SPINK4O60575 86 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 IGHV3-48P01763 117 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 SNRPCP09234 159 aaKnown RBP4.31□□□□□ -1.72
PTPRK-211ENST00000429595 TSPOP30536 169 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 CAMPP49913 170 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 HIST1H1AQ02539 215 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-211ENST00000429595 C12orf74Q32Q52 190 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 PRR27Q6MZM9 219 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 PRNTQ86SH4 94 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 Q8NAQ8 132 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 OR10AG1Q8NH19 301 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 PGLYRP4Q96LB8 373 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 DNAH5Q8TE73 4624 aa4.31□□□□□ -1.72
PTPRK-211ENST00000429595 LRP1BQ9NZR2 4599 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 IGHV1-24A0A0C4DH33 117 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 FAM223BA6NKX1 122 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 K7EMI3 77 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 AZU1P20160 251 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 SAMD13Q5VXD3 122 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 APRG1Q8IVJ8 170 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 FAM223AQ8IWN6 122 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 ORMDL3Q8N138 153 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 FAM19A2Q8N3H0 131 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 TMEM208Q9BTX3 173 aa4.3□□□□□ -1.72
PTPRK-211ENST00000429595 TRAV8-1A0A0A6YYK1 113 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 LINC01549A6NIU2 74 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 HSBP1L1C9JCN9 74 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 NTF3P20783 257 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 HNRNPA3P51991 378 aaKnown RBP4.29□□□□□ -1.72
PTPRK-211ENST00000429595 RHOGP84095 191 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 Q56UQ5 140 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 LEMD1Q68G75 181 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 RNASEKQ6P5S7 137 aaKnown RBP4.29□□□□□ -1.72
PTPRK-211ENST00000429595 Q6ZN92 141 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 GPHB5Q86YW7 130 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 EEF1AKMT3Q96AZ1 226 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 LINC00477Q96M19 166 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 SMPXQ9UHP9 88 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 GOLT1BQ9Y3E0 138 aa4.29□□□□□ -1.72
PTPRK-211ENST00000429595 RNF213Q63HN8 5207 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 IGHV3-21A0A0B4J1V1 117 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 SH2D1AO60880 128 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 CLEC3BP05452 202 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 ARMS2P0C7Q2 107 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 HLA-DRB4P13762 266 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 HTN3P15516 51 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 ZNF25P17030 456 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-211ENST00000429595 ARL3P36405 182 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 CACNG7P62955 275 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 TTC32Q5I0X7 151 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 SLC25A34Q6PIV7 304 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 LYZL1Q6UWQ5 148 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 FA2HQ7L5A8 372 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 PRELID3AQ96N28 172 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 NXT2Q9NPJ8 142 aaKnown RBP4.28□□□□□ -1.72
PTPRK-211ENST00000429595 HLA-DRB4X5D2U9 266 aa4.28□□□□□ -1.72
PTPRK-211ENST00000429595 TMEM213A2RRL7 107 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 K7EMT4 169 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 M0R3E3 92 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 NDUFA4O00483 81 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 SNAI2O43623 268 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 PPP1R17O96001 155 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 SPART-AS1P0CW21 52 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 COX8AP10176 69 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 ZNF138P52744 262 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 CCL18P55774 89 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 HAMPP81172 84 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 C15orf32Q32M92 178 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 MRPL51Q4U2R6 128 aaKnown RBP4.27□□□□□ -1.73
PTPRK-211ENST00000429595 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 AMN1Q8IY45 258 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 STPG4Q8N801 248 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 FER1L6-AS1Q8NA97 138 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 ZNF738Q8NE65 137 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 SGK494Q96LW2 274 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 METTL26Q96S19 204 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 UFC1Q9Y3C8 167 aa4.27□□□□□ -1.73
PTPRK-211ENST00000429595 A0A096LNJ9 63 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 OR2T8A6NH00 312 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 K7EP13 123 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 HBDP02042 147 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 APELAP0DMC3 54 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 G0S2P27469 103 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 FCER1GP30273 86 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 FUSP35637 526 aaKnown RBP eCLIP4.26□□□□□ -1.73
PTPRK-211ENST00000429595 DSCR10P59022 87 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 RPL32P62910 135 aaKnown RBP4.26□□□□□ -1.73
PTPRK-211ENST00000429595 SEC11AP67812 179 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 UBE2V1Q13404 147 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 ZNRF2Q8NHG8 242 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 RNF185Q96GF1 192 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 FAM19A4Q96LR4 140 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
PTPRK-211ENST00000429595 HIGD1BQ9P298 99 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms