RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 SPAG11AQ6PDA7 123 aa-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 ANP32BQ92688 251 aaKnown RBP-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 V9GYH0 126 aa-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 PKDREJQ9NTG1 2253 aa-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 ERCC6L2Q5T890 1561 aa-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 TENM4Q6N022 2769 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 TRBV6-1A0A0K0K1D8 114 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 PITX3O75364 302 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 TPPP2P59282 170 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 RPS25P62851 125 aaKnown RBP-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 TMEM170BQ5T4T1 132 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 TTC9CQ8N5M4 171 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 CASKIN1Q8WXD9 1431 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 ADGRB1O14514 1584 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 AKAP11Q9UKA4 1901 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 FAM208BQ5VWN6 2430 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 NCOR1O75376 2440 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 PTPRQQ9UMZ3 2332 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 PARP14Q460N5 1801 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 SSPOA2VEC9 5147 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 C10orf71Q711Q0 1435 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 HCG22E2RYF7 251 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 UQCR11O14957 56 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 ARPC5O15511 151 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 BCE1O60756 84 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 TNFP01375 233 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 SMIM21Q3B7S5 101 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 PDCD10Q9BUL8 212 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 PPRC1Q5VV67 1664 aaKnown RBP-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 LOC285095A0A1B0GVY8 99 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 LOC730098B7Z3J9 87 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 K7EQZ3 153 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 SPINK4O60575 86 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 ARPC4P59998 168 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 MYH9P35579 1960 aaKnown RBP-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 SIPA1L3O60292 1781 aaPredicted RBP-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 BCL9LQ86UU0 1499 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 SHANK2Q9UPX8 1470 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 PPIP5K1Q6PFW1 1433 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 F8VRH5 84 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 COX6B1P14854 86 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 Q6JHZ5 121 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 BAGE2Q86Y30 109 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 DPH3Q96FX2 82 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 PPP3R2Q96LZ3 170 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 SDF2Q99470 211 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 MGST2Q99735 147 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 RERGLQ9H628 205 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 NAA60Q9H7X0 242 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 DYNLRB1Q9NP97 96 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 LRRC37A2A6NM11 1700 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 IFT172Q9UG01 1749 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 FLNAP21333 2647 aaKnown RBP-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 MRC1P22897 1456 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 WDR7Q9Y4E6 1490 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 STAB1Q9NY15 2570 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 C2CD3Q4AC94 2353 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 PRM1P04553 51 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 SELENOWP63302 87 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 RBM3P98179 157 aaKnown RBP-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 AMELXQ99217 191 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 AGPAT4-IT1Q9H0P7 198 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 SERP1Q9Y6X1 66 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 ZNF292O60281 2723 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 NAIPQ13075 1403 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 PKD1L1Q8TDX9 2849 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 LRP6O75581 1613 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 CDK5RAP2Q96SN8 1893 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 FAM25AB3EWG3 89 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 FAM25CB3EWG5 89 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 FAM25GB3EWG6 89 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 HIST1H1DP16402 221 aaKnown RBP-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 SPRR2BP35325 72 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 WHAMMP3Q1A5X7 153 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 Q6AWC8 147 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 SNRNP25Q9BV90 132 aaKnown RBP-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 FAIMQ9NVQ4 179 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 MUC22E2RYF6 1773 aaPredicted RBP-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 GRIN2AQ12879 1464 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 MYOM3Q5VTT5 1437 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 MYH13Q9UKX3 1938 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 KDM3BQ7LBC6 1761 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 TRBV7-3A0A075B6L6 115 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 I3L2K1 104 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 SSSCA1O60232 199 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 IFNGP01579 166 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 MGPP08493 103 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 C8orf59Q8N0T1 100 aaPredicted RBP-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 ARL11Q969Q4 196 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 NWD2Q9ULI1 1742 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 LRP2P98164 4655 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 POLA1P09884 1462 aaPredicted RBP-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 CFTRP13569 1480 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 ZANQ9Y493 2812 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 WNK3Q9BYP7 1800 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 ARFGEF1Q9Y6D6 1849 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 HSPG2P98160 4391 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 MYCBP2O75592 4640 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 GPR98Q8WXG9 6306 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 Q56UQ5 140 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms