RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 SPAG11AQ6PDA7 123 aa-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 ANP32BQ92688 251 aaKnown RBP-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 V9GYH0 126 aa-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 PKDREJQ9NTG1 2253 aa-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 ERCC6L2Q5T890 1561 aa-0.24□□□□□ -2.45
TIMM9P3-201ENST00000428659 TENM4Q6N022 2769 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 TRBV6-1A0A0K0K1D8 114 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 PITX3O75364 302 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 TPPP2P59282 170 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 RPS25P62851 125 aaKnown RBP-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 TMEM170BQ5T4T1 132 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 TTC9CQ8N5M4 171 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 CASKIN1Q8WXD9 1431 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 ADGRB1O14514 1584 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 AKAP11Q9UKA4 1901 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 FAM208BQ5VWN6 2430 aa-0.25□□□□□ -2.45
TIMM9P3-201ENST00000428659 NCOR1O75376 2440 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 PTPRQQ9UMZ3 2332 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 PARP14Q460N5 1801 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 SSPOA2VEC9 5147 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 C10orf71Q711Q0 1435 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 HCG22E2RYF7 251 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 UQCR11O14957 56 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 ARPC5O15511 151 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 BCE1O60756 84 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 TNFP01375 233 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 SMIM21Q3B7S5 101 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 PDCD10Q9BUL8 212 aa-0.26□□□□□ -2.45
TIMM9P3-201ENST00000428659 PPRC1Q5VV67 1664 aaKnown RBP-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 LOC285095A0A1B0GVY8 99 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 LOC730098B7Z3J9 87 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 K7EQZ3 153 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 SPINK4O60575 86 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 ARPC4P59998 168 aa-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 MYH9P35579 1960 aaKnown RBP-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 SIPA1L3O60292 1781 aaPredicted RBP-0.27□□□□□ -2.45
TIMM9P3-201ENST00000428659 BCL9LQ86UU0 1499 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 SHANK2Q9UPX8 1470 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 PPIP5K1Q6PFW1 1433 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 F8VRH5 84 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 COX6B1P14854 86 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 Q6JHZ5 121 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 BAGE2Q86Y30 109 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 DPH3Q96FX2 82 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 PPP3R2Q96LZ3 170 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 SDF2Q99470 211 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 MGST2Q99735 147 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 RERGLQ9H628 205 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 NAA60Q9H7X0 242 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 DYNLRB1Q9NP97 96 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 LRRC37A2A6NM11 1700 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 IFT172Q9UG01 1749 aa-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 FLNAP21333 2647 aaKnown RBP-0.28□□□□□ -2.45
TIMM9P3-201ENST00000428659 MRC1P22897 1456 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 WDR7Q9Y4E6 1490 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 STAB1Q9NY15 2570 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 C2CD3Q4AC94 2353 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 PRM1P04553 51 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 SELENOWP63302 87 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 RBM3P98179 157 aaKnown RBP-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 AMELXQ99217 191 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 AGPAT4-IT1Q9H0P7 198 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 SERP1Q9Y6X1 66 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 ZNF292O60281 2723 aa-0.29□□□□□ -2.46
TIMM9P3-201ENST00000428659 NAIPQ13075 1403 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 PKD1L1Q8TDX9 2849 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 LRP6O75581 1613 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 CDK5RAP2Q96SN8 1893 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 FAM25AB3EWG3 89 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 FAM25CB3EWG5 89 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 FAM25GB3EWG6 89 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 HIST1H1DP16402 221 aaKnown RBP-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 SPRR2BP35325 72 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 WHAMMP3Q1A5X7 153 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 Q6AWC8 147 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 SNRNP25Q9BV90 132 aaKnown RBP-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 FAIMQ9NVQ4 179 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 MUC22E2RYF6 1773 aaPredicted RBP-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 GRIN2AQ12879 1464 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 MYOM3Q5VTT5 1437 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 MYH13Q9UKX3 1938 aa-0.3□□□□□ -2.46
TIMM9P3-201ENST00000428659 KDM3BQ7LBC6 1761 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 TRBV7-3A0A075B6L6 115 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 I3L2K1 104 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 SSSCA1O60232 199 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 IFNGP01579 166 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 MGPP08493 103 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 C8orf59Q8N0T1 100 aaPredicted RBP-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 ARL11Q969Q4 196 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 NWD2Q9ULI1 1742 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 LRP2P98164 4655 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 POLA1P09884 1462 aaPredicted RBP-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 CFTRP13569 1480 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 ZANQ9Y493 2812 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 WNK3Q9BYP7 1800 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 ARFGEF1Q9Y6D6 1849 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 HSPG2P98160 4391 aa-0.31□□□□□ -2.46
TIMM9P3-201ENST00000428659 MYCBP2O75592 4640 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 GPR98Q8WXG9 6306 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 Q56UQ5 140 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms