RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PRRC2AP48634 2157 aaKnown RBP3.62□□□□□ -1.83
LINC00458-202ENST00000427299 TTC28Q96AY4 2481 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 ABCA2Q9BZC7 2435 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 TLN1Q9Y490 2541 aaKnown RBP3.61□□□□□ -1.83
LINC00458-202ENST00000427299 IGHV3OR16-8A0A075B7F1 116 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 TRAV26-2A0A0B4J265 109 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 IGHV3-35A0A0C4DH35 117 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 IGHV3-66A0A0C4DH42 116 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 C11orf86A6NJI1 115 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 IGLL5B9A064 214 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 TMEM238C9JI98 176 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 H3BMG7 143 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 K7ERJ3 54 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 LY6HO94772 140 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 APOMO95445 188 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 RIPPLY3P57055 190 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 SNRPD3P62318 126 aaKnown RBP3.61□□□□□ -1.83
LINC00458-202ENST00000427299 PMVKQ15126 192 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 C12orf74Q32Q52 190 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 NSUN5P1Q3KNT7 163 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 ZFAND2AQ8N6M9 145 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 RASL10AQ92737 203 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 FAM19A4Q96LR4 140 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 PRADC1Q9BSG0 188 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 BPESC1Q9GZL8 116 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 TP53TG1Q9Y2A0 90 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 ATMQ13315 3056 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 ASPMQ8IZT6 3477 aa3.61□□□□□ -1.83
LINC00458-202ENST00000427299 SMG1Q96Q15 3661 aaKnown RBP3.6□□□□□ -1.83
LINC00458-202ENST00000427299 MGAQ8IWI9 3026 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 SPTA1P02549 2419 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 IGHV3-16A0A0C4DH30 117 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 TRBV6-5A0A0K0K1A5 114 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 KLLNB2CW77 178 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 G3V318 75 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 K7EMT4 169 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 M0QXV9 152 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 LGALS9O00182 355 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 IGHG2P01859 326 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 LGALS1P09382 135 aaKnown RBP3.6□□□□□ -1.83
LINC00458-202ENST00000427299 LGALS3P17931 250 aaKnown RBP3.6□□□□□ -1.83
LINC00458-202ENST00000427299 UBE2D1P51668 147 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 PRR9Q5T870 116 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 NRGNQ92686 78 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 SIGMAR1Q99720 223 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 NAA38Q9BRA0 125 aaKnown RBP3.6□□□□□ -1.83
LINC00458-202ENST00000427299 CHCHD5Q9BSY4 110 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 MUC4Q99102 2169 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 GVINP1Q7Z2Y8 2422 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 DMXL2Q8TDJ6 3036 aa3.6□□□□□ -1.83
LINC00458-202ENST00000427299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.59□□□□□ -1.83
LINC00458-202ENST00000427299 HIVEP3Q5T1R4 2406 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 MUC6Q6W4X9 2439 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 IGHV3OR16-13A0A075B7E8 117 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.59□□□□□ -1.83
LINC00458-202ENST00000427299 IGHV3-74A0A0B4J1X5 117 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 A0A0B4J2C4 111 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 TRBV27A0A0K0K1C4 114 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 SDHAF1A6NFY7 115 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 DUSP14O95147 198 aaKnown RBP3.59□□□□□ -1.83
LINC00458-202ENST00000427299 COX6B1P14854 86 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 CRYBA4P53673 196 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 ZNF56Q15929 161 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 C9orf66Q5T8R8 295 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 C14orf178Q8N769 122 aaPredicted RBP3.59□□□□□ -1.83
LINC00458-202ENST00000427299 CSNK1G2-AS1Q8NCQ2 148 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 PPDPFLQ8WWR9 84 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 PLEKHB2Q96CS7 222 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 CCL19Q99731 98 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 EDA2RQ9HAV5 297 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 TSSC4Q9Y5U2 329 aaPredicted RBP3.59□□□□□ -1.83
LINC00458-202ENST00000427299 DCHS1Q96JQ0 3298 aa3.59□□□□□ -1.83
LINC00458-202ENST00000427299 AKAP13Q12802 2813 aa3.59□□□□□ -1.84
LINC00458-202ENST00000427299 KALRNO60229 2985 aa3.59□□□□□ -1.84
LINC00458-202ENST00000427299 COL6A6A6NMZ7 2263 aa3.59□□□□□ -1.84
LINC00458-202ENST00000427299 RIF1Q5UIP0 2472 aaKnown RBP3.59□□□□□ -1.84
LINC00458-202ENST00000427299 HRNRQ86YZ3 2850 aaPredicted RBP3.58□□□□□ -1.84
LINC00458-202ENST00000427299 IGHV3OR16-12A0A075B7B8 117 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 IGHV3-49A0A0A0MS15 119 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 A0A0J9YX75 114 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 A6NDX4 124 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 A8MWV9 139 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 TMEM262E9PQX1 116 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 TSPAN13O95857 204 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 CD7P09564 240 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 RNASE3P12724 160 aaKnown RBP3.58□□□□□ -1.84
LINC00458-202ENST00000427299 RNASE4P34096 147 aaKnown RBP3.58□□□□□ -1.84
LINC00458-202ENST00000427299 UBE2D3P61077 147 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 UBE2D2P62837 147 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 MRPL23Q16540 153 aaKnown RBP3.58□□□□□ -1.84
LINC00458-202ENST00000427299 CFAP126Q5VTH2 177 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 ZFP2Q6ZN57 461 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 TEN1Q86WV5 123 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 GPHB5Q86YW7 130 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 C10orf126Q8N4M7 172 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 COPS9Q8WXC6 57 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 RPL39LQ96EH5 51 aaKnown RBP3.58□□□□□ -1.84
LINC00458-202ENST00000427299 RHPN1-AS1Q9BWJ2 59 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 TTTY13Q9BZ97 58 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms