RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 HIVEP3Q5T1R4 2406 aa12.23□□□□□ -0.45
NPC1L1-203ENST00000423141 COX6CP09669 75 aa12.23□□□□□ -0.45
NPC1L1-203ENST00000423141 TMEM61Q8N0U2 210 aa12.23□□□□□ -0.45
NPC1L1-203ENST00000423141 K7ENP7 123 aa12.22□□□□□ -0.45
NPC1L1-203ENST00000423141 IGHG2P01859 326 aa12.22□□□□□ -0.45
NPC1L1-203ENST00000423141 TRGV11A0A075B6L2 103 aa12.22□□□□□ -0.45
NPC1L1-203ENST00000423141 VSIG2Q96IQ7 327 aa12.22□□□□□ -0.45
NPC1L1-203ENST00000423141 FAM110AQ9BQ89 295 aa12.22□□□□□ -0.45
NPC1L1-203ENST00000423141 H3BUX3 64 aa12.21□□□□□ -0.45
NPC1L1-203ENST00000423141 HTN1P15515 57 aa12.21□□□□□ -0.45
NPC1L1-203ENST00000423141 MUC6Q6W4X9 2439 aa12.21□□□□□ -0.45
NPC1L1-203ENST00000423141 IGHV4-38-2P0DP08 117 aa12.21□□□□□ -0.46
NPC1L1-203ENST00000423141 TMEM95Q3KNT9 176 aa12.21□□□□□ -0.46
NPC1L1-203ENST00000423141 BRI3O95415 125 aa12.2□□□□□ -0.46
NPC1L1-203ENST00000423141 PRM2P04554 102 aa12.2□□□□□ -0.46
NPC1L1-203ENST00000423141 PYGO1Q9Y3Y4 419 aa12.2□□□□□ -0.46
NPC1L1-203ENST00000423141 CELSR2Q9HCU4 2923 aa12.19□□□□□ -0.46
NPC1L1-203ENST00000423141 CSMD2Q7Z408 3487 aa12.19□□□□□ -0.46
NPC1L1-203ENST00000423141 H3BUA1 57 aa12.19□□□□□ -0.46
NPC1L1-203ENST00000423141 FAM240AA0A1B0GVK7 77 aa12.18□□□□□ -0.46
NPC1L1-203ENST00000423141 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
NPC1L1-203ENST00000423141 IGLV1-40P01703 118 aa12.18□□□□□ -0.46
NPC1L1-203ENST00000423141 DEFB121Q5J5C9 76 aa12.18□□□□□ -0.46
NPC1L1-203ENST00000423141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
NPC1L1-203ENST00000423141 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
NPC1L1-203ENST00000423141 RBMY1A1P0DJD3 496 aaKnown RBP12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 RBMY1CP0DJD4 496 aa12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 RBMY1FQ15415 496 aaKnown RBP12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 MRPL23Q16540 153 aaKnown RBP12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 CSPG4Q6UVK1 2322 aa12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 CUBNO60494 3623 aa12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 C10orf99Q6UWK7 81 aa12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 DUX5Q96PT3 197 aa12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
NPC1L1-203ENST00000423141 TRBV7-7A0A0K0K1E9 115 aa12.16□□□□□ -0.46
NPC1L1-203ENST00000423141 TINCRA0A1B0GVN0 87 aa12.16□□□□□ -0.46
NPC1L1-203ENST00000423141 K7EMT4 169 aa12.16□□□□□ -0.46
NPC1L1-203ENST00000423141 Q6ZSN1 163 aa12.16□□□□□ -0.46
NPC1L1-203ENST00000423141 A0A0U1RRA0 63 aa12.15□□□□□ -0.46
NPC1L1-203ENST00000423141 SNRPD3P62318 126 aaKnown RBP12.15□□□□□ -0.46
NPC1L1-203ENST00000423141 CHCHD7Q9BUK0 85 aa12.15□□□□□ -0.46
NPC1L1-203ENST00000423141 A6NDX4 124 aa12.15□□□□□ -0.47
NPC1L1-203ENST00000423141 CDKN2A-AS1Q9UH64 79 aa12.15□□□□□ -0.47
NPC1L1-203ENST00000423141 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.47
NPC1L1-203ENST00000423141 NACAE9PAV3 2078 aa12.15□□□□□ -0.47
NPC1L1-203ENST00000423141 SPG11Q96JI7 2443 aa12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 FAM236AA0A1B0GUQ0 79 aa12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 FAM236BA0A1B0GV22 79 aa12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 TNFRSF18Q9Y5U5 241 aa12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 IGHV3-38A0A0C4DH36 116 aa12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 SMCR5Q8TEV8 140 aa12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 LINC01587Q99440 93 aa12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 LINC00467Q9BRT7 94 aa12.14□□□□□ -0.47
NPC1L1-203ENST00000423141 K7EQG2 157 aa12.13□□□□□ -0.47
NPC1L1-203ENST00000423141 ZNF625Q96I27 306 aaPredicted RBP12.13□□□□□ -0.47
NPC1L1-203ENST00000423141 CFHR3Q02985 330 aa12.13□□□□□ -0.47
NPC1L1-203ENST00000423141 YAE1D1Q9NRH1 226 aa12.13□□□□□ -0.47
NPC1L1-203ENST00000423141 TMEM101Q96IK0 257 aa12.12□□□□□ -0.47
NPC1L1-203ENST00000423141 IGHV4-61A0A0C4DH41 118 aa12.11□□□□□ -0.47
NPC1L1-203ENST00000423141 Q8N2B8 174 aa12.11□□□□□ -0.47
NPC1L1-203ENST00000423141 COX6A2Q02221 97 aa12.09□□□□□ -0.47
NPC1L1-203ENST00000423141 LINC00308Q8TCZ7 52 aa12.09□□□□□ -0.47
NPC1L1-203ENST00000423141 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
NPC1L1-203ENST00000423141 NDUFA1O15239 70 aa12.09□□□□□ -0.47
NPC1L1-203ENST00000423141 TIMM17BO60830 172 aa12.09□□□□□ -0.47
NPC1L1-203ENST00000423141 SYNJ2BPP57105 145 aa12.09□□□□□ -0.47
NPC1L1-203ENST00000423141 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
NPC1L1-203ENST00000423141 Q9H8V8 135 aa12.08□□□□□ -0.48
NPC1L1-203ENST00000423141 EDA2RQ9HAV5 297 aa12.08□□□□□ -0.48
NPC1L1-203ENST00000423141 PSMB8P28062 276 aa12.08□□□□□ -0.48
NPC1L1-203ENST00000423141 SOSTDC1Q6X4U4 206 aa12.08□□□□□ -0.48
NPC1L1-203ENST00000423141 COX7A2LO14548 114 aa12.07□□□□□ -0.48
NPC1L1-203ENST00000423141 DAZ2Q13117 558 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-203ENST00000423141 DAZ4Q86SG3 579 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-203ENST00000423141 DAZ3Q9NR90 486 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-203ENST00000423141 KLRB1Q12918 225 aa12.06□□□□□ -0.48
NPC1L1-203ENST00000423141 C19orf84I3L1E1 186 aa12.05□□□□□ -0.48
NPC1L1-203ENST00000423141 NDUFA7O95182 113 aa12.05□□□□□ -0.48
NPC1L1-203ENST00000423141 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
NPC1L1-203ENST00000423141 CIRBPQ14011 172 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-203ENST00000423141 C22orf24Q9Y442 160 aa12.04□□□□□ -0.48
NPC1L1-203ENST00000423141 FAM218AQ96MZ4 157 aa12.04□□□□□ -0.48
NPC1L1-203ENST00000423141 IGHV3OR16-12A0A075B7B8 117 aa12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 IGLV5-45A0A087WSX0 123 aa12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 ACYP1P07311 99 aa12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 BEAN1Q3B7T3 259 aa12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 TMEM126AQ9H061 195 aa12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 VPREB3Q9UKI3 123 aa12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 RBMY1BA6NDE4 496 aaKnown RBP12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 RBMY1EA6NEQ0 496 aaKnown RBP12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 AVPP01185 164 aa12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 RBMY1DP0C7P1 496 aaKnown RBP12.03□□□□□ -0.48
NPC1L1-203ENST00000423141 C2CD3Q4AC94 2353 aa12.02□□□□□ -0.48
NPC1L1-203ENST00000423141 TIRAPP58753 221 aa12.02□□□□□ -0.49
NPC1L1-203ENST00000423141 IMUPQ9GZP8 106 aa12.02□□□□□ -0.49
NPC1L1-203ENST00000423141 BAALC-AS2P0C853 105 aa12.01□□□□□ -0.49
NPC1L1-203ENST00000423141 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
NPC1L1-203ENST00000423141 C9orf153Q5TBE3 101 aa12.01□□□□□ -0.49
NPC1L1-203ENST00000423141 LINC00643Q86TS7 51 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms