RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 LITAFQ99732 161 aa12.27□□□□□ -0.45
PKP4-204ENST00000421462 RHOHQ15669 191 aa12.26□□□□□ -0.45
PKP4-204ENST00000421462 TRBV6-5A0A0K0K1A5 114 aa12.26□□□□□ -0.45
PKP4-204ENST00000421462 H3BUX3 64 aa12.26□□□□□ -0.45
PKP4-204ENST00000421462 CHD8Q9HCK8 2581 aa12.25□□□□□ -0.45
PKP4-204ENST00000421462 APRG1Q8IVJ8 170 aa12.25□□□□□ -0.45
PKP4-204ENST00000421462 ADORA2A-AS1P86434 159 aa12.24□□□□□ -0.45
PKP4-204ENST00000421462 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
PKP4-204ENST00000421462 M0QXV9 152 aa12.24□□□□□ -0.45
PKP4-204ENST00000421462 Q6Q795 121 aa12.24□□□□□ -0.45
PKP4-204ENST00000421462 CELSR2Q9HCU4 2923 aa12.23□□□□□ -0.45
PKP4-204ENST00000421462 IGHV1-58A0A0C4DH39 117 aa12.23□□□□□ -0.45
PKP4-204ENST00000421462 LMO4P61968 165 aa12.23□□□□□ -0.45
PKP4-204ENST00000421462 FAM110AQ9BQ89 295 aa12.23□□□□□ -0.45
PKP4-204ENST00000421462 C10orf99Q6UWK7 81 aa12.23□□□□□ -0.45
PKP4-204ENST00000421462 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
PKP4-204ENST00000421462 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
PKP4-204ENST00000421462 WNK1Q9H4A3 2382 aa12.23□□□□□ -0.45
PKP4-204ENST00000421462 RS1O15537 224 aa12.22□□□□□ -0.45
PKP4-204ENST00000421462 IGHV4-38-2P0DP08 117 aa12.22□□□□□ -0.45
PKP4-204ENST00000421462 MIAQ16674 131 aa12.22□□□□□ -0.45
PKP4-204ENST00000421462 DCANP1Q8TF63 244 aa12.22□□□□□ -0.45
PKP4-204ENST00000421462 USP9YO00507 2555 aaPredicted RBP12.22□□□□□ -0.45
PKP4-204ENST00000421462 CFAP161Q6P656 301 aa12.22□□□□□ -0.45
PKP4-204ENST00000421462 H3BT86 120 aa12.22□□□□□ -0.45
PKP4-204ENST00000421462 LST1O00453 97 aa12.22□□□□□ -0.45
PKP4-204ENST00000421462 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
PKP4-204ENST00000421462 KLK9Q2XQG4 91 aa12.21□□□□□ -0.46
PKP4-204ENST00000421462 VSIG2Q96IQ7 327 aa12.21□□□□□ -0.46
PKP4-204ENST00000421462 CDKN2A-AS1Q9UH64 79 aa12.2□□□□□ -0.46
PKP4-204ENST00000421462 PPDPFQ9H3Y8 114 aa12.2□□□□□ -0.46
PKP4-204ENST00000421462 TMEM101Q96IK0 257 aa12.19□□□□□ -0.46
PKP4-204ENST00000421462 MYO9AB2RTY4 2548 aa12.19□□□□□ -0.46
PKP4-204ENST00000421462 A0A0J9YX75 114 aa12.19□□□□□ -0.46
PKP4-204ENST00000421462 USMG5Q96IX5 58 aa12.19□□□□□ -0.46
PKP4-204ENST00000421462 SYNJ2BPP57105 145 aa12.19□□□□□ -0.46
PKP4-204ENST00000421462 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
PKP4-204ENST00000421462 MRPS36P82909 103 aaKnown RBP12.19□□□□□ -0.46
PKP4-204ENST00000421462 C19orf54Q5BKX5 351 aa12.19□□□□□ -0.46
PKP4-204ENST00000421462 FAM104AQ969W3 186 aa12.19□□□□□ -0.46
PKP4-204ENST00000421462 DGAT2L7PQ6IED9 249 aa12.18□□□□□ -0.46
PKP4-204ENST00000421462 KLK5Q9Y337 293 aaPredicted RBP12.18□□□□□ -0.46
PKP4-204ENST00000421462 FBXL19-AS1Q494R0 122 aa12.17□□□□□ -0.46
PKP4-204ENST00000421462 C9orf153Q5TBE3 101 aa12.17□□□□□ -0.46
PKP4-204ENST00000421462 Q6ZSN1 163 aa12.17□□□□□ -0.46
PKP4-204ENST00000421462 BRI3O95415 125 aa12.16□□□□□ -0.46
PKP4-204ENST00000421462 SPANXDQ9BXN6 97 aa12.16□□□□□ -0.46
PKP4-204ENST00000421462 Q9H8V8 135 aa12.16□□□□□ -0.46
PKP4-204ENST00000421462 SPANXCQ9NY87 97 aa12.16□□□□□ -0.46
PKP4-204ENST00000421462 HOXD3P31249 432 aaPredicted RBP12.16□□□□□ -0.46
PKP4-204ENST00000421462 Q8N2B8 174 aa12.16□□□□□ -0.46
PKP4-204ENST00000421462 SMCR5Q8TEV8 140 aa12.16□□□□□ -0.46
PKP4-204ENST00000421462 LINC00467Q9BRT7 94 aa12.16□□□□□ -0.46
PKP4-204ENST00000421462 SPTBN4Q9H254 2564 aa12.16□□□□□ -0.46
PKP4-204ENST00000421462 SETD2Q9BYW2 2564 aaPredicted RBP12.15□□□□□ -0.46
PKP4-204ENST00000421462 IGHG2P01859 326 aa12.15□□□□□ -0.46
PKP4-204ENST00000421462 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
PKP4-204ENST00000421462 CITED2Q99967 270 aaPredicted RBP12.15□□□□□ -0.46
PKP4-204ENST00000421462 NDUFA7O95182 113 aa12.15□□□□□ -0.46
PKP4-204ENST00000421462 CENPEQ02224 2701 aa12.15□□□□□ -0.46
PKP4-204ENST00000421462 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
PKP4-204ENST00000421462 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
PKP4-204ENST00000421462 LINC00694P0DN24 101 aa12.14□□□□□ -0.47
PKP4-204ENST00000421462 RBMY1FQ15415 496 aaKnown RBP12.14□□□□□ -0.47
PKP4-204ENST00000421462 LINC01587Q99440 93 aa12.14□□□□□ -0.47
PKP4-204ENST00000421462 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
PKP4-204ENST00000421462 LOC107984640A0A0U1RRK4 108 aa12.14□□□□□ -0.47
PKP4-204ENST00000421462 DAZ2Q13117 558 aaKnown RBP12.14□□□□□ -0.47
PKP4-204ENST00000421462 DAZ4Q86SG3 579 aaKnown RBP12.14□□□□□ -0.47
PKP4-204ENST00000421462 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
PKP4-204ENST00000421462 Q9HAA7 133 aa12.14□□□□□ -0.47
PKP4-204ENST00000421462 DAZ3Q9NR90 486 aaKnown RBP12.14□□□□□ -0.47
PKP4-204ENST00000421462 ZANQ9Y493 2812 aa12.14□□□□□ -0.47
PKP4-204ENST00000421462 COX6A2Q02221 97 aa12.13□□□□□ -0.47
PKP4-204ENST00000421462 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
PKP4-204ENST00000421462 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
PKP4-204ENST00000421462 TRAV13-1A0A0B4J241 112 aa12.12□□□□□ -0.47
PKP4-204ENST00000421462 POLQO75417 2590 aa12.12□□□□□ -0.47
PKP4-204ENST00000421462 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
PKP4-204ENST00000421462 K7ENP7 123 aa12.12□□□□□ -0.47
PKP4-204ENST00000421462 VPREB3Q9UKI3 123 aa12.12□□□□□ -0.47
PKP4-204ENST00000421462 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
PKP4-204ENST00000421462 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
PKP4-204ENST00000421462 BAALC-AS2P0C853 105 aa12.11□□□□□ -0.47
PKP4-204ENST00000421462 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
PKP4-204ENST00000421462 IGHV4-61A0A0C4DH41 118 aa12.1□□□□□ -0.47
PKP4-204ENST00000421462 KLRB1Q12918 225 aa12.1□□□□□ -0.47
PKP4-204ENST00000421462 CHCHD7Q9BUK0 85 aa12.1□□□□□ -0.47
PKP4-204ENST00000421462 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
PKP4-204ENST00000421462 FAM240AA0A1B0GVK7 77 aa12.1□□□□□ -0.47
PKP4-204ENST00000421462 PTPN13Q12923 2485 aa12.1□□□□□ -0.47
PKP4-204ENST00000421462 TRBV7-7A0A0K0K1E9 115 aa12.09□□□□□ -0.47
PKP4-204ENST00000421462 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
PKP4-204ENST00000421462 JMJD1CQ15652 2540 aa12.09□□□□□ -0.47
PKP4-204ENST00000421462 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
PKP4-204ENST00000421462 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
PKP4-204ENST00000421462 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
PKP4-204ENST00000421462 HIST2H2BDQ6DRA6 164 aa12.09□□□□□ -0.47
PKP4-204ENST00000421462 PRIMA1Q86XR5 153 aa12.09□□□□□ -0.47
PKP4-204ENST00000421462 DEFB131AP59861 70 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms