RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 NDUFS6O75380 124 aaKnown RBP10.6□□□□□ -0.71
UPF3AP3-201ENST00000420996 H2AFB1P0C5Y9 115 aa10.6□□□□□ -0.71
UPF3AP3-201ENST00000420996 TRGC1P0CF51 173 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 AMTP48728 403 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 LRP2P98164 4655 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 COTL1Q14019 142 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 ZNF345Q14585 488 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 MAJINQ3KP22 176 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 PRSS3P2Q8NHM4 247 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 GTSF1Q8WW33 167 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
UPF3AP3-201ENST00000420996 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
UPF3AP3-201ENST00000420996 PRR3P79522 188 aaKnown RBP10.58□□□□□ -0.72
UPF3AP3-201ENST00000420996 CENPWQ5EE01 88 aa10.58□□□□□ -0.72
UPF3AP3-201ENST00000420996 RNF213Q63HN8 5207 aa10.58□□□□□ -0.72
UPF3AP3-201ENST00000420996 IGKV2-24A0A0C4DH68 120 aa10.57□□□□□ -0.72
UPF3AP3-201ENST00000420996 XKRY2A2RUG3 117 aa10.57□□□□□ -0.72
UPF3AP3-201ENST00000420996 HIGD2BQ4VC39 106 aa10.57□□□□□ -0.72
UPF3AP3-201ENST00000420996 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
UPF3AP3-201ENST00000420996 NTF3P20783 257 aa10.56□□□□□ -0.72
UPF3AP3-201ENST00000420996 LYZL1Q6UWQ5 148 aa10.56□□□□□ -0.72
UPF3AP3-201ENST00000420996 STPG4Q8N801 248 aa10.56□□□□□ -0.72
UPF3AP3-201ENST00000420996 SMIM12Q96EX1 92 aa10.56□□□□□ -0.72
UPF3AP3-201ENST00000420996 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
UPF3AP3-201ENST00000420996 IFNA1P01562 189 aa10.55□□□□□ -0.72
UPF3AP3-201ENST00000420996 CHCHD10Q8WYQ3 142 aaPredicted RBP10.55□□□□□ -0.72
UPF3AP3-201ENST00000420996 GNG13Q9P2W3 67 aa10.55□□□□□ -0.72
UPF3AP3-201ENST00000420996 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 A0A0J9YXV3 536 aa10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 HMSDA8MTL9 139 aa10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 CCL20P78556 96 aa10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
UPF3AP3-201ENST00000420996 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 GNG4P50150 75 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 KRTAP10-8P60410 259 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 ODF1Q14990 250 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 C9orf62Q8N4C0 152 aa10.53□□□□□ -0.72
UPF3AP3-201ENST00000420996 A0A096LNI7 61 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 TRAV1-1A0A0B4J248 108 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 KANTRA0A1W2PQU2 76 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 BCL2L11O43521 198 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 EIF5AP63241 154 aaKnown RBP10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 REG3GQ6UW15 175 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 GATD1Q8NB37 220 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 BIN3Q9NQY0 253 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
UPF3AP3-201ENST00000420996 H7C423 109 aa10.51□□□□□ -0.73
UPF3AP3-201ENST00000420996 NCR2O95944 276 aa10.51□□□□□ -0.73
UPF3AP3-201ENST00000420996 CTRLP40313 264 aa10.51□□□□□ -0.73
UPF3AP3-201ENST00000420996 Q6ZNX1 250 aa10.51□□□□□ -0.73
UPF3AP3-201ENST00000420996 FOXI1Q12951 378 aa10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 TWIST1Q15672 202 aa10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 RNASEKQ6P5S7 137 aaKnown RBP10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 CNFNQ9BYD5 112 aa10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 PKIGQ9Y2B9 76 aa10.5□□□□□ -0.73
UPF3AP3-201ENST00000420996 TRBV20OR9-2A0A075B6H5 130 aa10.49□□□□□ -0.73
UPF3AP3-201ENST00000420996 TRAV26-2A0A0B4J265 109 aa10.49□□□□□ -0.73
UPF3AP3-201ENST00000420996 SRSF9Q13242 221 aaKnown RBP eCLIP10.49□□□□□ -0.73
UPF3AP3-201ENST00000420996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 PDE6DO43924 150 aa10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 FGF6P10767 208 aa10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 MEF2BQ02080 365 aaPredicted RBP10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
UPF3AP3-201ENST00000420996 TEX46H3BTG2 121 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 APCSP02743 223 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 Q6ZRP5 223 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 OR5A1Q8NGJ0 315 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 MED9Q9NWA0 146 aa10.47□□□□□ -0.73
UPF3AP3-201ENST00000420996 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
UPF3AP3-201ENST00000420996 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
UPF3AP3-201ENST00000420996 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
UPF3AP3-201ENST00000420996 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
UPF3AP3-201ENST00000420996 hCG_2014768A0A024R1R8 64 aa10.45□□□□□ -0.74
UPF3AP3-201ENST00000420996 XCL1P47992 114 aa10.45□□□□□ -0.74
UPF3AP3-201ENST00000420996 TEX261Q6UWH6 196 aa10.45□□□□□ -0.74
UPF3AP3-201ENST00000420996 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
UPF3AP3-201ENST00000420996 LINC00959A0A1B0GUT2 108 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 SDHAF1A6NFY7 115 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 CCL25O15444 150 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 SMIM15Q7Z3B0 74 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 LINC00526Q96FQ7 95 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 BTF3L4Q96K17 158 aa10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 RPP21Q9H633 154 aaKnown RBP10.44□□□□□ -0.74
UPF3AP3-201ENST00000420996 FAM231BA6NCW3 169 aa10.43□□□□□ -0.74
UPF3AP3-201ENST00000420996 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
UPF3AP3-201ENST00000420996 I3L3M4 83 aa10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 PMCHP20382 165 aa10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 FOXA3P55318 350 aaPredicted RBP10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 SYCNQ0VAF6 134 aa10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 RNASE7Q9H1E1 156 aaKnown RBP10.42□□□□□ -0.74
UPF3AP3-201ENST00000420996 A0A1B0GVG6 124 aa10.41□□□□□ -0.74
UPF3AP3-201ENST00000420996 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
UPF3AP3-201ENST00000420996 BCL2P10415 239 aa10.41□□□□□ -0.74
UPF3AP3-201ENST00000420996 ESDP10768 282 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms