RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 LOXP28300 417 aaPredicted RBP4.9□□□□□ -1.62
SBNO1-202ENST00000420886 CMC4P56277 68 aaPredicted RBP4.9□□□□□ -1.62
SBNO1-202ENST00000420886 MIR7-3HGQ8N6C7 128 aa4.9□□□□□ -1.62
SBNO1-202ENST00000420886 OTOGLQ3ZCN5 2332 aa4.9□□□□□ -1.62
SBNO1-202ENST00000420886 XCL1P47992 114 aa4.9□□□□□ -1.62
SBNO1-202ENST00000420886 LINC00574Q9H8X3 128 aa4.9□□□□□ -1.62
SBNO1-202ENST00000420886 XCL2Q9UBD3 114 aa4.9□□□□□ -1.62
SBNO1-202ENST00000420886 PCNTO95613 3336 aa4.9□□□□□ -1.62
SBNO1-202ENST00000420886 TRBV27A0A0K0K1C4 114 aa4.9□□□□□ -1.62
SBNO1-202ENST00000420886 IGHV3-38A0A0C4DH36 116 aa4.9□□□□□ -1.63
SBNO1-202ENST00000420886 GOLGB1Q14789 3259 aaKnown RBP4.9□□□□□ -1.63
SBNO1-202ENST00000420886 IGHV4-4A0A075B6R2 117 aa4.9□□□□□ -1.63
SBNO1-202ENST00000420886 BPY2O14599 106 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 CTSGP08311 255 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 NDUFS5O43920 106 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 SIRPDQ9H106 197 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 IGLV3-9A0A075B6K5 115 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 IGHV7-4-1A0A0J9YVY3 117 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 IGLV4-3A0A075B6K6 122 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 MDS2Q8NDY4 140 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 DNAH12Q6ZR08 3092 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 IGF2-ASQ6U949 168 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 RITA1Q96K30 269 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
SBNO1-202ENST00000420886 NHLRC4P0CG21 123 aaPredicted RBP4.88□□□□□ -1.63
SBNO1-202ENST00000420886 IGHV3-16A0A0C4DH30 117 aa4.88□□□□□ -1.63
SBNO1-202ENST00000420886 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
SBNO1-202ENST00000420886 A8MZ25 164 aa4.88□□□□□ -1.63
SBNO1-202ENST00000420886 PRYO14603 147 aa4.88□□□□□ -1.63
SBNO1-202ENST00000420886 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.88□□□□□ -1.63
SBNO1-202ENST00000420886 IGLV4-69A0A075B6H9 119 aa4.88□□□□□ -1.63
SBNO1-202ENST00000420886 PRAC2D3DTV9 90 aa4.88□□□□□ -1.63
SBNO1-202ENST00000420886 H3BUA1 57 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 CRYGDP07320 174 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 PLAC8L1A1L4L8 177 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 BCE1O60756 84 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 NKAPP1Q8N9T2 125 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 TRBV10-3A0A0K0K1G6 114 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 OVOL3O00110 214 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 MUC4Q99102 2169 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 SAA4P35542 130 aa4.87□□□□□ -1.63
SBNO1-202ENST00000420886 ZNF672Q499Z4 452 aaPredicted RBP4.87□□□□□ -1.63
SBNO1-202ENST00000420886 IGHV3-53P01767 116 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 ESRGQ1W209 222 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 IGIPA6NJ69 53 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 HOXB4P17483 251 aaPredicted RBP4.86□□□□□ -1.63
SBNO1-202ENST00000420886 COX8CQ7Z4L0 72 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 PATE3B3GLJ2 98 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 K7EQD1 137 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 FHL3Q13643 280 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 IBA57-AS1B1ANH7 110 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 EBI3Q14213 229 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 TRBV6-5A0A0K0K1A5 114 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 PRB2P02812 416 aaPredicted RBP4.86□□□□□ -1.63
SBNO1-202ENST00000420886 IGHV4OR15-8A0A075B7B6 117 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 A0A087WW49 117 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 SOSTDC1Q6X4U4 206 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 PIP4P2Q8N4L2 257 aa4.86□□□□□ -1.63
SBNO1-202ENST00000420886 IGLV2-18A0A075B6J9 118 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 ANKHD1Q8IWZ3 2542 aaKnown RBP4.85□□□□□ -1.63
SBNO1-202ENST00000420886 RPL28P46779 137 aaKnown RBP4.85□□□□□ -1.63
SBNO1-202ENST00000420886 EP300Q09472 2414 aaPredicted RBP4.85□□□□□ -1.63
SBNO1-202ENST00000420886 DEFB121Q5J5C9 76 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 C2CD3Q4AC94 2353 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 IGHV3OR16-10A0A075B7F0 116 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 PIP4P1Q86T03 277 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 DIRC1Q969H9 104 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 UTRNP46939 3433 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 M0QY20 66 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
SBNO1-202ENST00000420886 COX6B1P14854 86 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 A0A087WVE0 104 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 CFHR3Q02985 330 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 ATP1A1-AS1Q5TC04 95 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 CXCL6P80162 114 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 CD164Q04900 197 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 CEMP1Q6PRD7 247 aaPredicted RBP4.84□□□□□ -1.63
SBNO1-202ENST00000420886 SMIM11BQ8TCY0 68 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 CCL19Q99731 98 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 LYNX1G3V0Z9 82 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 G3V318 75 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 LYNX1P0DP58 116 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 FAM19A4Q96LR4 140 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 CDKN2A-AS1Q9UH64 79 aa4.84□□□□□ -1.63
SBNO1-202ENST00000420886 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
SBNO1-202ENST00000420886 PRSS33Q8NF86 280 aa4.83□□□□□ -1.64
SBNO1-202ENST00000420886 LINC01560Q8TB33 94 aa4.83□□□□□ -1.64
SBNO1-202ENST00000420886 A0A1W2PRX2 142 aa4.83□□□□□ -1.64
SBNO1-202ENST00000420886 DAZAP2Q15038 168 aaPredicted RBP4.83□□□□□ -1.64
SBNO1-202ENST00000420886 PSMG3-AS1Q96PY0 264 aa4.83□□□□□ -1.64
SBNO1-202ENST00000420886 SLPIP03973 132 aa4.83□□□□□ -1.64
SBNO1-202ENST00000420886 DEFB131AP59861 70 aa4.83□□□□□ -1.64
SBNO1-202ENST00000420886 POLR2KP53803 58 aaKnown RBP4.83□□□□□ -1.64
SBNO1-202ENST00000420886 TSPEAR-AS2P59090 65 aa4.83□□□□□ -1.64
SBNO1-202ENST00000420886 PSPHP1O15172 72 aa4.82□□□□□ -1.64
SBNO1-202ENST00000420886 CGB3P0DN86 165 aa4.82□□□□□ -1.64
SBNO1-202ENST00000420886 CGB7P0DN87 165 aa4.82□□□□□ -1.64
SBNO1-202ENST00000420886 IGHV7-81A0A0B4J1V7 117 aa4.82□□□□□ -1.64
SBNO1-202ENST00000420886 CENPFP49454 3210 aa4.82□□□□□ -1.64
SBNO1-202ENST00000420886 IGHV4-28A0A0C4DH34 117 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms