RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 WFDC10BQ8IUB3 73 aa9.04□□□□□ -0.96
UBR4-205ENST00000417040 U3KQK5 164 aa9.04□□□□□ -0.96
UBR4-205ENST00000417040 TANC2Q9HCD6 1990 aa9.04□□□□□ -0.96
UBR4-205ENST00000417040 Q6ZS46 218 aa9.04□□□□□ -0.96
UBR4-205ENST00000417040 CCL18P55774 89 aa9.04□□□□□ -0.96
UBR4-205ENST00000417040 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
UBR4-205ENST00000417040 PRM2P04554 102 aa9.03□□□□□ -0.96
UBR4-205ENST00000417040 C22orf34Q6ZV56 151 aa9.03□□□□□ -0.96
UBR4-205ENST00000417040 COL6A6A6NMZ7 2263 aa9.03□□□□□ -0.96
UBR4-205ENST00000417040 H3BQ85 93 aa9.03□□□□□ -0.96
UBR4-205ENST00000417040 KIAA1549Q9HCM3 1950 aa9.03□□□□□ -0.96
UBR4-205ENST00000417040 CXCL5P42830 114 aa9.03□□□□□ -0.96
UBR4-205ENST00000417040 LINC00694P0DN24 101 aa9.02□□□□□ -0.96
UBR4-205ENST00000417040 SHANK1Q9Y566 2161 aa9.02□□□□□ -0.97
UBR4-205ENST00000417040 NDUFC2-KCTD14E9PQ53 114 aa9.02□□□□□ -0.97
UBR4-205ENST00000417040 IGLV2-11P01706 119 aa9.02□□□□□ -0.97
UBR4-205ENST00000417040 C3orf84H3BNL1 204 aa9.02□□□□□ -0.97
UBR4-205ENST00000417040 SPTA1P02549 2419 aa9.02□□□□□ -0.97
UBR4-205ENST00000417040 WNK2Q9Y3S1 2297 aa9.02□□□□□ -0.97
UBR4-205ENST00000417040 REG3AQ06141 175 aa9.02□□□□□ -0.97
UBR4-205ENST00000417040 PRR4Q16378 134 aa9.02□□□□□ -0.97
UBR4-205ENST00000417040 TRBV30A0A0K0K1B3 111 aa9.01□□□□□ -0.97
UBR4-205ENST00000417040 NDUFA7O95182 113 aa9.01□□□□□ -0.97
UBR4-205ENST00000417040 A6NDX4 124 aa9.01□□□□□ -0.97
UBR4-205ENST00000417040 CFAP126Q5VTH2 177 aa9□□□□□ -0.97
UBR4-205ENST00000417040 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
UBR4-205ENST00000417040 SRCAPQ6ZRS2 3230 aa9□□□□□ -0.97
UBR4-205ENST00000417040 TRBV10-1A0A0K0K1A3 114 aa9□□□□□ -0.97
UBR4-205ENST00000417040 LINC00526Q96FQ7 95 aa9□□□□□ -0.97
UBR4-205ENST00000417040 C10orf99Q6UWK7 81 aa9□□□□□ -0.97
UBR4-205ENST00000417040 HIGD2AQ9BW72 106 aa9□□□□□ -0.97
UBR4-205ENST00000417040 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
UBR4-205ENST00000417040 GTF3C1Q12789 2109 aa8.99□□□□□ -0.97
UBR4-205ENST00000417040 M0QY20 66 aa8.99□□□□□ -0.97
UBR4-205ENST00000417040 PRR9Q5T870 116 aa8.99□□□□□ -0.97
UBR4-205ENST00000417040 MALRD1Q5VYJ5 2156 aa8.98□□□□□ -0.97
UBR4-205ENST00000417040 ODF3BA8MYP8 253 aa8.98□□□□□ -0.97
UBR4-205ENST00000417040 NRACQ8N912 160 aa8.98□□□□□ -0.97
UBR4-205ENST00000417040 H7C423 109 aa8.98□□□□□ -0.97
UBR4-205ENST00000417040 C2orf16Q68DN1 1984 aa8.98□□□□□ -0.97
UBR4-205ENST00000417040 PRO0255Q9UI72 69 aa8.98□□□□□ -0.97
UBR4-205ENST00000417040 Q8N976 141 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 MYCNOSP40205 109 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 C1orf158Q8N1D5 194 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 C11orf21Q9P2W6 132 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 LINC00310P59036 64 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 FAM240AA0A1B0GVK7 77 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 LRCOL1A6NCL2 159 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 Q6ZSV7 163 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 FAM30AQ9NZY2 134 aa8.97□□□□□ -0.97
UBR4-205ENST00000417040 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
UBR4-205ENST00000417040 LOC100131303A0A0U1RQF7 123 aa8.96□□□□□ -0.97
UBR4-205ENST00000417040 C6orf99Q4VX62 202 aa8.96□□□□□ -0.97
UBR4-205ENST00000417040 POM121L12Q8N7R1 296 aa8.96□□□□□ -0.97
UBR4-205ENST00000417040 SEC61GP60059 68 aa8.96□□□□□ -0.98
UBR4-205ENST00000417040 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
UBR4-205ENST00000417040 V9GYY9 64 aa8.96□□□□□ -0.98
UBR4-205ENST00000417040 PCNX3Q9H6A9 2034 aa8.96□□□□□ -0.98
UBR4-205ENST00000417040 J3QKU1 62 aa8.96□□□□□ -0.98
UBR4-205ENST00000417040 M0QXV9 152 aa8.96□□□□□ -0.98
UBR4-205ENST00000417040 TSHBP01222 138 aa8.96□□□□□ -0.98
UBR4-205ENST00000417040 FAM19A5Q7Z5A7 132 aaPredicted RBP8.95□□□□□ -0.98
UBR4-205ENST00000417040 FAM19A1Q7Z5A9 133 aa8.95□□□□□ -0.98
UBR4-205ENST00000417040 DOPEY2Q9Y3R5 2298 aa8.95□□□□□ -0.98
UBR4-205ENST00000417040 TRBV6-5A0A0K0K1A5 114 aa8.95□□□□□ -0.98
UBR4-205ENST00000417040 CRIP2P52943 208 aaPredicted RBP8.95□□□□□ -0.98
UBR4-205ENST00000417040 PDE6GP18545 87 aa8.95□□□□□ -0.98
UBR4-205ENST00000417040 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
UBR4-205ENST00000417040 ABCA1O95477 2261 aa8.95□□□□□ -0.98
UBR4-205ENST00000417040 IGKV2-28A0A075B6P5 120 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 IGKV2D-28P01615 120 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 FAM222AQ5U5X8 452 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 NCOR1O75376 2440 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 USP17L23D6RBM5 183 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 UFSP1Q6NVU6 142 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 NCOA6Q14686 2063 aaPredicted RBP8.94□□□□□ -0.98
UBR4-205ENST00000417040 DNAJC9-AS1A6NH13 148 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 HRCT1Q6UXD1 115 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 B9D2Q9BPU9 175 aa8.94□□□□□ -0.98
UBR4-205ENST00000417040 CCKP06307 115 aa8.93□□□□□ -0.98
UBR4-205ENST00000417040 SERP2Q8N6R1 65 aa8.93□□□□□ -0.98
UBR4-205ENST00000417040 URB1-AS1Q96HZ7 61 aa8.93□□□□□ -0.98
UBR4-205ENST00000417040 PCDH15Q96QU1 1955 aa8.93□□□□□ -0.98
UBR4-205ENST00000417040 RNASE3P12724 160 aaKnown RBP8.93□□□□□ -0.98
UBR4-205ENST00000417040 TIMM17BO60830 172 aa8.93□□□□□ -0.98
UBR4-205ENST00000417040 LINC00574Q9H8X3 128 aa8.93□□□□□ -0.98
UBR4-205ENST00000417040 K7EQG2 157 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 WFDC13Q8IUB5 93 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 LINC00482Q8N8I6 264 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 C19orf84I3L1E1 186 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 ZGRF1Q86YA3 2104 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 Q8NA96 180 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 SPRY4Q9C004 299 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 LST1O00453 97 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 COX7CP15954 63 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 C18orf65Q6ZTR6 163 aa8.92□□□□□ -0.98
UBR4-205ENST00000417040 PPDPFQ9H3Y8 114 aa8.91□□□□□ -0.98
UBR4-205ENST00000417040 IBA57-AS1B1ANH7 110 aa8.91□□□□□ -0.98
UBR4-205ENST00000417040 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
UBR4-205ENST00000417040 LY6LH3BQJ8 138 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms