RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 LGALS9O00182 355 aa11.79□□□□□ -0.52
PHRF1-203ENST00000416188 MED14OSP0DP75 135 aa11.79□□□□□ -0.52
PHRF1-203ENST00000416188 TIMM17AQ99595 171 aa11.79□□□□□ -0.52
PHRF1-203ENST00000416188 TAX1BP3O14907 124 aa11.79□□□□□ -0.52
PHRF1-203ENST00000416188 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
PHRF1-203ENST00000416188 FAM110AQ9BQ89 295 aa11.79□□□□□ -0.52
PHRF1-203ENST00000416188 LY6LH3BQJ8 138 aa11.79□□□□□ -0.52
PHRF1-203ENST00000416188 C1orf229Q6ZS94 237 aaPredicted RBP11.79□□□□□ -0.52
PHRF1-203ENST00000416188 VSIG2Q96IQ7 327 aa11.78□□□□□ -0.52
PHRF1-203ENST00000416188 LINC00322Q6ZN03 302 aaPredicted RBP11.78□□□□□ -0.52
PHRF1-203ENST00000416188 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
PHRF1-203ENST00000416188 TRBV6-1A0A0K0K1D8 114 aa11.78□□□□□ -0.52
PHRF1-203ENST00000416188 CRIP3Q6Q6R5 217 aa11.78□□□□□ -0.52
PHRF1-203ENST00000416188 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.52
PHRF1-203ENST00000416188 E9PLD3 99 aa11.77□□□□□ -0.53
PHRF1-203ENST00000416188 ODF1Q14990 250 aa11.77□□□□□ -0.53
PHRF1-203ENST00000416188 H0YGX0 51 aa11.77□□□□□ -0.53
PHRF1-203ENST00000416188 KLK12Q9UKR0 248 aa11.77□□□□□ -0.53
PHRF1-203ENST00000416188 USP9YO00507 2555 aaPredicted RBP11.76□□□□□ -0.53
PHRF1-203ENST00000416188 C20orf203Q8NBC4 194 aa11.76□□□□□ -0.53
PHRF1-203ENST00000416188 TRACP01848 142 aa11.76□□□□□ -0.53
PHRF1-203ENST00000416188 CEMP1Q6PRD7 247 aaPredicted RBP11.75□□□□□ -0.53
PHRF1-203ENST00000416188 TM2D2Q9BX73 214 aa11.75□□□□□ -0.53
PHRF1-203ENST00000416188 WFDC2Q14508 124 aa11.75□□□□□ -0.53
PHRF1-203ENST00000416188 PKD1L2Q7Z442 2459 aa11.75□□□□□ -0.53
PHRF1-203ENST00000416188 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 OXLD1Q5BKU9 147 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 TMEM263Q8WUH6 116 aaKnown RBP11.74□□□□□ -0.53
PHRF1-203ENST00000416188 PKIGQ9Y2B9 76 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 TIRAPP58753 221 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 LINC01620Q4KN68 170 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 NDUFA1O15239 70 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 NDUFA7O95182 113 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 IGLV2-8P01709 118 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 HIGD1BQ9P298 99 aa11.74□□□□□ -0.53
PHRF1-203ENST00000416188 NDUFS5O43920 106 aa11.73□□□□□ -0.53
PHRF1-203ENST00000416188 FUSP35637 526 aaKnown RBP eCLIP11.73□□□□□ -0.53
PHRF1-203ENST00000416188 SPAG11BQ08648 103 aa11.73□□□□□ -0.53
PHRF1-203ENST00000416188 SPANXDQ9BXN6 97 aa11.73□□□□□ -0.53
PHRF1-203ENST00000416188 TP53TG3Q9ULZ0 132 aa11.73□□□□□ -0.53
PHRF1-203ENST00000416188 P0DMU3 169 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 PRO0255Q9UI72 69 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 NCR3O14931 201 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 PSMB8P28062 276 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 A0A1B0GXF2 115 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 B5MCH6 92 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 DEFB131BA0A096LNP1 70 aa11.72□□□□□ -0.53
PHRF1-203ENST00000416188 LECT2O14960 151 aa11.71□□□□□ -0.54
PHRF1-203ENST00000416188 FAM222AQ5U5X8 452 aa11.71□□□□□ -0.54
PHRF1-203ENST00000416188 Q6ZS46 218 aa11.71□□□□□ -0.54
PHRF1-203ENST00000416188 IGHV1-58A0A0C4DH39 117 aa11.7□□□□□ -0.54
PHRF1-203ENST00000416188 Q6ZTI0 123 aa11.7□□□□□ -0.54
PHRF1-203ENST00000416188 TEN1Q86WV5 123 aa11.7□□□□□ -0.54
PHRF1-203ENST00000416188 Q6ZUT4 128 aa11.7□□□□□ -0.54
PHRF1-203ENST00000416188 K7EQG2 157 aa11.7□□□□□ -0.54
PHRF1-203ENST00000416188 GDF5OSQ5U4N7 250 aa11.7□□□□□ -0.54
PHRF1-203ENST00000416188 C18orf65Q6ZTR6 163 aa11.7□□□□□ -0.54
PHRF1-203ENST00000416188 KIAA1549Q9HCM3 1950 aa11.69□□□□□ -0.54
PHRF1-203ENST00000416188 ACYP1P07311 99 aa11.69□□□□□ -0.54
PHRF1-203ENST00000416188 TP73-AS1Q9UF72 201 aa11.69□□□□□ -0.54
PHRF1-203ENST00000416188 TRBV10-1A0A0K0K1A3 114 aa11.69□□□□□ -0.54
PHRF1-203ENST00000416188 SMIM9A6NGZ8 99 aa11.69□□□□□ -0.54
PHRF1-203ENST00000416188 FLNBO75369 2602 aaKnown RBP11.69□□□□□ -0.54
PHRF1-203ENST00000416188 IGKV3D-7A0A0C4DH55 119 aa11.69□□□□□ -0.54
PHRF1-203ENST00000416188 CLEC2BQ92478 149 aa11.69□□□□□ -0.54
PHRF1-203ENST00000416188 MLST8Q9BVC4 326 aa11.69□□□□□ -0.54
PHRF1-203ENST00000416188 FN1P02751 2386 aaKnown RBP11.68□□□□□ -0.54
PHRF1-203ENST00000416188 POLQO75417 2590 aa11.68□□□□□ -0.54
PHRF1-203ENST00000416188 CRYGBP07316 175 aa11.68□□□□□ -0.54
PHRF1-203ENST00000416188 EIF4EBP1Q13541 118 aaPredicted RBP11.68□□□□□ -0.54
PHRF1-203ENST00000416188 ARHGAP32A7KAX9 2087 aa11.67□□□□□ -0.54
PHRF1-203ENST00000416188 TRAV26-1A0A087WT03 109 aa11.67□□□□□ -0.54
PHRF1-203ENST00000416188 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
PHRF1-203ENST00000416188 SS18L2Q9UHA2 77 aa11.67□□□□□ -0.54
PHRF1-203ENST00000416188 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
PHRF1-203ENST00000416188 TANC2Q9HCD6 1990 aa11.67□□□□□ -0.54
PHRF1-203ENST00000416188 CXCL5P42830 114 aa11.67□□□□□ -0.54
PHRF1-203ENST00000416188 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
PHRF1-203ENST00000416188 Q8N6K4 173 aa11.66□□□□□ -0.54
PHRF1-203ENST00000416188 LYRM9A8MSI8 78 aa11.66□□□□□ -0.54
PHRF1-203ENST00000416188 MIFP14174 115 aa11.66□□□□□ -0.54
PHRF1-203ENST00000416188 SETD2Q9BYW2 2564 aaPredicted RBP11.65□□□□□ -0.54
PHRF1-203ENST00000416188 SPATA12Q7Z6I5 190 aa11.65□□□□□ -0.54
PHRF1-203ENST00000416188 C20orf173Q96LM9 149 aa11.65□□□□□ -0.54
PHRF1-203ENST00000416188 NREPQ16612 68 aa11.64□□□□□ -0.55
PHRF1-203ENST00000416188 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
PHRF1-203ENST00000416188 UBE2AP49459 152 aa11.63□□□□□ -0.55
PHRF1-203ENST00000416188 NFE4Q86UQ8 179 aa11.63□□□□□ -0.55
PHRF1-203ENST00000416188 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
PHRF1-203ENST00000416188 PTH2Q96A98 100 aa11.63□□□□□ -0.55
PHRF1-203ENST00000416188 CITED1Q99966 193 aa11.63□□□□□ -0.55
PHRF1-203ENST00000416188 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
PHRF1-203ENST00000416188 TRBV10-2A0A0K0K1G8 114 aa11.62□□□□□ -0.55
PHRF1-203ENST00000416188 HIGD2BQ4VC39 106 aa11.62□□□□□ -0.55
PHRF1-203ENST00000416188 TRAV10A0A0B4J240 114 aa11.61□□□□□ -0.55
PHRF1-203ENST00000416188 G3V4G9 280 aa11.61□□□□□ -0.55
PHRF1-203ENST00000416188 FOXI1Q12951 378 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms