RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 FABP2P12104 132 aa11.11□□□□□ -0.63
LRCH3-202ENST00000414675 EMP1P54849 157 aa11.11□□□□□ -0.63
LRCH3-202ENST00000414675 HIST1H4GQ99525 98 aa11.11□□□□□ -0.63
LRCH3-202ENST00000414675 SPXQ9BT56 116 aa11.11□□□□□ -0.63
LRCH3-202ENST00000414675 NHP2Q9NX24 153 aaKnown RBP11.11□□□□□ -0.63
LRCH3-202ENST00000414675 SAMD5Q5TGI4 173 aa11.11□□□□□ -0.63
LRCH3-202ENST00000414675 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
LRCH3-202ENST00000414675 TM2D2Q9BX73 214 aa11.11□□□□□ -0.63
LRCH3-202ENST00000414675 SPCS1Q9Y6A9 102 aa11.11□□□□□ -0.63
LRCH3-202ENST00000414675 MYMXA0A1B0GTQ4 84 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 K7ERJ3 54 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 TAL2Q16559 108 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 C20orf203Q8NBC4 194 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 C11orf86A6NJI1 115 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 RS1O15537 224 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 PMVKQ15126 192 aa11.1□□□□□ -0.63
LRCH3-202ENST00000414675 VWFP04275 2813 aa11.09□□□□□ -0.63
LRCH3-202ENST00000414675 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
LRCH3-202ENST00000414675 NDUFA11Q86Y39 141 aa11.09□□□□□ -0.63
LRCH3-202ENST00000414675 OR5A1Q8NGJ0 315 aa11.08□□□□□ -0.64
LRCH3-202ENST00000414675 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
LRCH3-202ENST00000414675 E9PLD3 99 aa11.07□□□□□ -0.64
LRCH3-202ENST00000414675 IGHV3-53P01767 116 aa11.07□□□□□ -0.64
LRCH3-202ENST00000414675 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
LRCH3-202ENST00000414675 TENM1Q9UKZ4 2725 aa11.07□□□□□ -0.64
LRCH3-202ENST00000414675 RHODO00212 210 aa11.07□□□□□ -0.64
LRCH3-202ENST00000414675 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
LRCH3-202ENST00000414675 FAM110AQ9BQ89 295 aa11.07□□□□□ -0.64
LRCH3-202ENST00000414675 TRGV1A0A0A0MS02 117 aa11.06□□□□□ -0.64
LRCH3-202ENST00000414675 PAPPA-AS1Q5QFB9 102 aa11.06□□□□□ -0.64
LRCH3-202ENST00000414675 LINC00482Q8N8I6 264 aa11.06□□□□□ -0.64
LRCH3-202ENST00000414675 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
LRCH3-202ENST00000414675 SPATA3Q8NHX4 192 aa11.06□□□□□ -0.64
LRCH3-202ENST00000414675 Q6ZTI0 123 aa11.06□□□□□ -0.64
LRCH3-202ENST00000414675 ZNF815PA8K554 130 aa11.05□□□□□ -0.64
LRCH3-202ENST00000414675 K7ERU9 68 aa11.05□□□□□ -0.64
LRCH3-202ENST00000414675 PF4P02776 101 aa11.05□□□□□ -0.64
LRCH3-202ENST00000414675 HERVK_113P61574 105 aa11.05□□□□□ -0.64
LRCH3-202ENST00000414675 PHLDA1Q8WV24 401 aaPredicted RBP11.05□□□□□ -0.64
LRCH3-202ENST00000414675 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
LRCH3-202ENST00000414675 IGLV4-3A0A075B6K6 122 aa11.05□□□□□ -0.64
LRCH3-202ENST00000414675 TMEM263Q8WUH6 116 aaKnown RBP11.05□□□□□ -0.64
LRCH3-202ENST00000414675 BAHCC1Q9P281 2608 aa11.04□□□□□ -0.64
LRCH3-202ENST00000414675 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
LRCH3-202ENST00000414675 IGHV3-38A0A0C4DH36 116 aa11.04□□□□□ -0.64
LRCH3-202ENST00000414675 C12orf74Q32Q52 190 aa11.04□□□□□ -0.64
LRCH3-202ENST00000414675 SCGB1D4Q6XE38 83 aa11.04□□□□□ -0.64
LRCH3-202ENST00000414675 ZNF479Q96JC4 524 aa11.04□□□□□ -0.64
LRCH3-202ENST00000414675 VPS25Q9BRG1 176 aa11.04□□□□□ -0.64
LRCH3-202ENST00000414675 CEMP1Q6PRD7 247 aaPredicted RBP11.04□□□□□ -0.64
LRCH3-202ENST00000414675 CSNK1G2-AS1Q8NCQ2 148 aa11.04□□□□□ -0.64
LRCH3-202ENST00000414675 PLAC8L1A1L4L8 177 aa11.03□□□□□ -0.64
LRCH3-202ENST00000414675 CHCHD7Q9BUK0 85 aa11.03□□□□□ -0.64
LRCH3-202ENST00000414675 NOP10Q9NPE3 64 aaKnown RBP11.02□□□□□ -0.64
LRCH3-202ENST00000414675 IGLL5B9A064 214 aa11.02□□□□□ -0.65
LRCH3-202ENST00000414675 PCP4P48539 62 aa11.02□□□□□ -0.65
LRCH3-202ENST00000414675 TMEM170BQ5T4T1 132 aa11.01□□□□□ -0.65
LRCH3-202ENST00000414675 DNAJC30Q96LL9 226 aa11.01□□□□□ -0.65
LRCH3-202ENST00000414675 ATRQ13535 2644 aa11.01□□□□□ -0.65
LRCH3-202ENST00000414675 NFE4Q86UQ8 179 aa11.01□□□□□ -0.65
LRCH3-202ENST00000414675 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11□□□□□ -0.65
LRCH3-202ENST00000414675 IGKV2-29A2NJV5 120 aaPredicted RBP11□□□□□ -0.65
LRCH3-202ENST00000414675 TSPEAR-AS2P59090 65 aa11□□□□□ -0.65
LRCH3-202ENST00000414675 PLEKHB2Q96CS7 222 aa11□□□□□ -0.65
LRCH3-202ENST00000414675 PYGO1Q9Y3Y4 419 aa11□□□□□ -0.65
LRCH3-202ENST00000414675 CYSRT1A8MQ03 144 aa11□□□□□ -0.65
LRCH3-202ENST00000414675 SRSF9Q13242 221 aaKnown RBP eCLIP11□□□□□ -0.65
LRCH3-202ENST00000414675 C21orf62-AS1Q17RA5 79 aa11□□□□□ -0.65
LRCH3-202ENST00000414675 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
LRCH3-202ENST00000414675 VCX2Q9H322 139 aa11□□□□□ -0.65
LRCH3-202ENST00000414675 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
LRCH3-202ENST00000414675 DAZ2Q13117 558 aaKnown RBP10.99□□□□□ -0.65
LRCH3-202ENST00000414675 TMEM238LA0A1B0GVL6 79 aa10.98□□□□□ -0.65
LRCH3-202ENST00000414675 A6NJY4 79 aa10.98□□□□□ -0.65
LRCH3-202ENST00000414675 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
LRCH3-202ENST00000414675 AMELXQ99217 191 aa10.98□□□□□ -0.65
LRCH3-202ENST00000414675 TRAV4A0A0B4J268 109 aa10.98□□□□□ -0.65
LRCH3-202ENST00000414675 C1QTNF4Q9BXJ3 329 aa10.98□□□□□ -0.65
LRCH3-202ENST00000414675 UBE2D4Q9Y2X8 147 aa10.98□□□□□ -0.65
LRCH3-202ENST00000414675 CRLF1O75462 422 aa10.97□□□□□ -0.65
LRCH3-202ENST00000414675 ZNF22P17026 224 aaPredicted RBP10.97□□□□□ -0.65
LRCH3-202ENST00000414675 COTL1Q14019 142 aa10.97□□□□□ -0.65
LRCH3-202ENST00000414675 TEP1Q99973 2627 aaKnown RBP10.97□□□□□ -0.65
LRCH3-202ENST00000414675 GAGE7O76087 117 aa10.97□□□□□ -0.65
LRCH3-202ENST00000414675 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
LRCH3-202ENST00000414675 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
LRCH3-202ENST00000414675 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
LRCH3-202ENST00000414675 RRN3P1Q2M238 152 aa10.97□□□□□ -0.65
LRCH3-202ENST00000414675 A0A1B0GWB2 263 aa10.96□□□□□ -0.65
LRCH3-202ENST00000414675 K7EQD1 137 aa10.96□□□□□ -0.65
LRCH3-202ENST00000414675 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.96□□□□□ -0.65
LRCH3-202ENST00000414675 SLC25A29Q8N8R3 303 aa10.96□□□□□ -0.65
LRCH3-202ENST00000414675 TMEM223A0PJW6 202 aa10.96□□□□□ -0.66
LRCH3-202ENST00000414675 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
LRCH3-202ENST00000414675 Q6ZUT4 128 aa10.95□□□□□ -0.66
LRCH3-202ENST00000414675 F8P00451 2351 aa10.95□□□□□ -0.66
LRCH3-202ENST00000414675 OVOL2Q9BRP0 275 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms